Protein–RNA interactions for Protein: P56159

GFRA1, GDNF family receptor alpha-1, humanhuman

Predictions only

Length 465 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GFRA1P56159 SBK3-202ENST00000612221 1270 ntAPPRIS P1 TSL 5 BASIC15□□□□□ -0.01
GFRA1P56159 NBL1-213ENST00000622566 2109 ntAPPRIS P3 TSL 4 BASIC15□□□□□ -0.01
GFRA1P56159 CU104787.1-201ENST00000624155 288 ntTSL 1 (best) BASIC15□□□□□ -0.01
GFRA1P56159 WASF1-205ENST00000392587 2675 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
GFRA1P56159 HPCAL1-208ENST00000622018 1535 ntAPPRIS P1 TSL 5 BASIC15□□□□□ -0.01
GFRA1P56159 CHGA-201ENST00000216492 2063 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
GFRA1P56159 KMT5A-202ENST00000402868 3140 ntAPPRIS P2 TSL 1 (best) BASIC15□□□□□ -0.01
GFRA1P56159 BMPER-201ENST00000297161 5031 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
GFRA1P56159 PCDHA8-202ENST00000531613 5260 ntAPPRIS P2 TSL 1 (best) BASIC15□□□□□ -0.01
GFRA1P56159 SHANK1-201ENST00000293441 6643 ntAPPRIS P2 TSL 1 (best) BASIC15□□□□□ -0.01
GFRA1P56159 ALDH3A1-202ENST00000395555 1495 ntTSL 3 BASIC15□□□□□ -0.01
GFRA1P56159 TMED3-203ENST00000536821 2265 ntTSL 2 BASIC15□□□□□ -0.01
GFRA1P56159 LRCH2-201ENST00000317135 4929 ntAPPRIS P3 TSL 1 (best) BASIC15□□□□□ -0.01
GFRA1P56159 FUT5-201ENST00000252675 1916 ntAPPRIS P1 BASIC15□□□□□ -0.01
GFRA1P56159 PTPN20-203ENST00000374342 1929 ntTSL 1 (best) BASIC15□□□□□ -0.01
GFRA1P56159 ASPRV1-201ENST00000320256 2177 ntAPPRIS P1 BASIC15□□□□□ -0.01
GFRA1P56159 RGS14-201ENST00000408923 2415 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
GFRA1P56159 SFTPB-202ENST00000409383 1867 ntAPPRIS P2 TSL 1 (best) BASIC14.99□□□□□ -0.01
GFRA1P56159 AC105339.1-201ENST00000440089 1362 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
GFRA1P56159 GOLGA6L17P-202ENST00000614358 1398 ntBASIC14.99□□□□□ -0.01
GFRA1P56159 CCDC90B-202ENST00000455220 1550 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
GFRA1P56159 ZDHHC4-206ENST00000405731 1348 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
GFRA1P56159 KRT18P28-201ENST00000453838 1332 ntBASIC14.99□□□□□ -0.01
GFRA1P56159 FLVCR1-AS1-201ENST00000356684 2525 ntTSL 2 BASIC14.99□□□□□ -0.01
GFRA1P56159 IPMK-201ENST00000373935 6133 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
GFRA1P56159 CAMK2D-201ENST00000296402 5820 ntAPPRIS P3 TSL 5 BASIC14.99□□□□□ -0.01
GFRA1P56159 ITLN1-201ENST00000326245 1183 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
GFRA1P56159 CYB5A-203ENST00000397914 619 ntTSL 3 BASIC14.99□□□□□ -0.01
GFRA1P56159 LBH-203ENST00000404397 543 ntTSL 4 BASIC14.99□□□□□ -0.01
GFRA1P56159 GGCT-205ENST00000409436 954 ntTSL 3 BASIC14.99□□□□□ -0.01
GFRA1P56159 AL627223.1-201ENST00000416693 442 ntBASIC14.99□□□□□ -0.01
GFRA1P56159 AL592309.1-201ENST00000443127 649 ntBASIC14.99□□□□□ -0.01
GFRA1P56159 NDUFB2-202ENST00000460088 420 ntTSL 3 BASIC14.99□□□□□ -0.01
GFRA1P56159 MLF1-210ENST00000484955 1247 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
GFRA1P56159 SERF1A-207ENST00000512649 846 ntTSL 2 BASIC14.99□□□□□ -0.01
GFRA1P56159 RNF34-208ENST00000555076 593 ntTSL 3 BASIC14.99□□□□□ -0.01
GFRA1P56159 AC093520.2-201ENST00000561830 333 ntBASIC14.99□□□□□ -0.01
GFRA1P56159 AC018558.2-201ENST00000566562 480 ntTSL 3 BASIC14.99□□□□□ -0.01
GFRA1P56159 AC087645.4-201ENST00000638890 792 ntTSL 5 BASIC14.99□□□□□ -0.01
GFRA1P56159 FCHO1-201ENST00000252771 3118 ntAPPRIS P1 TSL 5 BASIC14.99□□□□□ -0.01
GFRA1P56159 ILF3-203ENST00000449870 6119 ntAPPRIS ALT2 TSL 1 (best) BASIC14.99□□□□□ -0.01
GFRA1P56159 LGI4-202ENST00000392225 2891 ntTSL 5 BASIC14.99□□□□□ -0.01
GFRA1P56159 GMPR2-217ENST00000559104 1719 ntTSL 5 BASIC14.99□□□□□ -0.01
GFRA1P56159 ARID5A-201ENST00000357485 2188 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
GFRA1P56159 PYGL-201ENST00000216392 3048 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
GFRA1P56159 SSC5D-202ENST00000587166 3017 ntAPPRIS ALT2 TSL 1 (best) BASIC14.99□□□□□ -0.01
GFRA1P56159 CCNA1-203ENST00000625767 1699 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
GFRA1P56159 FAM210A-201ENST00000322247 4340 ntAPPRIS P1 TSL 2 BASIC14.99□□□□□ -0.01
GFRA1P56159 CCNL2-203ENST00000408952 1857 ntTSL 5 BASIC14.99□□□□□ -0.01
GFRA1P56159 OPRD1-201ENST00000234961 9345 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
GFRA1P56159 DNAJB2-201ENST00000336576 3176 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
GFRA1P56159 TCEA1-201ENST00000396401 2718 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
GFRA1P56159 SGK3-206ENST00000520976 2483 ntTSL 2 BASIC14.99□□□□□ -0.01
GFRA1P56159 SPIDR-227ENST00000541342 3311 ntAPPRIS ALT2 TSL 2 BASIC14.99□□□□□ -0.01
GFRA1P56159 BCAS3-204ENST00000585744 2203 ntAPPRIS ALT2 TSL 5 BASIC14.98□□□□□ -0.01
GFRA1P56159 WDR74-206ENST00000529106 1366 ntAPPRIS P1 TSL 2 BASIC14.98□□□□□ -0.01
GFRA1P56159 GJB3-201ENST00000373362 1797 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
GFRA1P56159 ZFYVE19-203ENST00000355341 2775 ntAPPRIS P3 TSL 1 (best) BASIC14.98□□□□□ -0.01
GFRA1P56159 GGT6-203ENST00000573591 1730 ntTSL 4 BASIC14.98□□□□□ -0.01
GFRA1P56159 MOCS1-206ENST00000425303 1920 ntTSL 2 BASIC14.98□□□□□ -0.01
GFRA1P56159 RETREG1-201ENST00000306320 3268 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
GFRA1P56159 FHAD1-205ENST00000375997 1459 ntTSL 3 BASIC14.98□□□□□ -0.01
GFRA1P56159 BORCS8-203ENST00000477565 1489 ntAPPRIS ALT1 TSL 1 (best) BASIC14.98□□□□□ -0.01
GFRA1P56159 IZUMO4-201ENST00000395296 869 ntTSL 2 BASIC14.98□□□□□ -0.01
GFRA1P56159 LINC01264-201ENST00000431395 500 ntTSL 3 BASIC14.98□□□□□ -0.01
GFRA1P56159 AC007364.1-201ENST00000449714 1022 ntTSL 2 BASIC14.98□□□□□ -0.01
GFRA1P56159 AC023141.5-201ENST00000458585 616 ntBASIC14.98□□□□□ -0.01
GFRA1P56159 AL391335.1-201ENST00000504583 535 ntTSL 4 BASIC14.98□□□□□ -0.01
GFRA1P56159 AC103957.2-201ENST00000521218 510 ntTSL 2 BASIC14.98□□□□□ -0.01
GFRA1P56159 AC019257.1-202ENST00000521498 445 ntTSL 5 BASIC14.98□□□□□ -0.01
GFRA1P56159 GALNT9-208ENST00000541995 1001 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
GFRA1P56159 ABCF3-203ENST00000429586 2624 ntAPPRIS P2 TSL 1 (best) BASIC14.98□□□□□ -0.01
GFRA1P56159 TRAPPC2L-201ENST00000301021 2215 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
GFRA1P56159 TDRP-201ENST00000324079 3395 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
GFRA1P56159 STK32C-204ENST00000368622 2010 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
GFRA1P56159 SEPHS1-202ENST00000378614 2387 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
GFRA1P56159 PSMC3IP-202ENST00000393795 1416 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
GFRA1P56159 ACSM2B-211ENST00000567001 1988 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
GFRA1P56159 BX276092.9-201ENST00000636797 1563 ntAPPRIS ALT2 TSL 5 BASIC14.98□□□□□ -0.01
GFRA1P56159 BATF2-202ENST00000435842 1949 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
GFRA1P56159 MOB3A-201ENST00000357066 3391 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
GFRA1P56159 KCNA2-201ENST00000316361 2827 ntAPPRIS P1 TSL 2 BASIC14.98□□□□□ -0.01
GFRA1P56159 TACR2-202ENST00000373307 1740 ntTSL 2 BASIC14.97□□□□□ -0.01
GFRA1P56159 CDK2-204ENST00000553376 1725 ntTSL 5 BASIC14.97□□□□□ -0.01
GFRA1P56159 AL512652.2-201ENST00000625156 1716 ntBASIC14.97□□□□□ -0.01
GFRA1P56159 GAB1-201ENST00000262994 2648 ntAPPRIS ALT1 TSL 1 (best) BASIC14.97□□□□□ -0.01
GFRA1P56159 PLCB2-202ENST00000456256 4242 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
GFRA1P56159 GALNT9-201ENST00000328957 2410 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
GFRA1P56159 AL355987.1-201ENST00000435202 2420 ntAPPRIS P1 TSL 2 BASIC14.97□□□□□ -0.01
GFRA1P56159 HLA-B-249ENST00000412585 1547 ntAPPRIS P1 BASIC14.97□□□□□ -0.01
GFRA1P56159 OSR2-209ENST00000522510 1528 ntAPPRIS P1 TSL 2 BASIC14.97□□□□□ -0.01
GFRA1P56159 SEMA3B-204ENST00000433753 2755 ntAPPRIS ALT1 TSL 1 (best) BASIC14.97□□□□□ -0.01
GFRA1P56159 AMT-206ENST00000458307 1860 ntTSL 2 BASIC14.97□□□□□ -0.01
GFRA1P56159 TINF2-208ENST00000558566 1874 ntAPPRIS ALT2 TSL 2 BASIC14.97□□□□□ -0.01
GFRA1P56159 DCST1-202ENST00000368419 2207 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
GFRA1P56159 ETV2-204ENST00000403402 1335 ntAPPRIS P3 TSL 1 (best) BASIC14.97□□□□□ -0.01
GFRA1P56159 PTPRC-206ENST00000413409 1338 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
GFRA1P56159 SBF2-AS1-201ENST00000498905 2709 ntTSL 5 BASIC14.97□□□□□ -0.01
GFRA1P56159 TPST2-201ENST00000338754 5697 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
GFRA1P56159 ZDHHC20-202ENST00000382466 5338 ntAPPRIS P3 TSL 1 (best) BASIC14.97□□□□□ -0.01
Retrieved 100 of 98,524 protein–RNA pairs in 26.8 ms