Protein–RNA interactions for Protein: P55283

CDH4, Cadherin-4, humanhuman

Predictions only

Length 916 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH4P55283 AC026191.1-201ENST00000491930 829 ntTSL 3 BASIC17.12■□□□□ 0.33
CDH4P55283 FAM172A-207ENST00000509739 1031 ntTSL 2 BASIC17.12■□□□□ 0.33
CDH4P55283 CFL1-202ENST00000524553 860 ntTSL 2 BASIC17.12■□□□□ 0.33
CDH4P55283 KBTBD4-203ENST00000525720 980 ntTSL 3 BASIC17.12■□□□□ 0.33
CDH4P55283 CCND1-203ENST00000536559 553 ntTSL 3 BASIC17.12■□□□□ 0.33
CDH4P55283 ATP6V0D1-203ENST00000540149 1262 ntTSL 2 BASIC17.12■□□□□ 0.33
CDH4P55283 AC104971.3-201ENST00000589794 335 ntTSL 2 BASIC17.12■□□□□ 0.33
CDH4P55283 SLC9A3-AS1-205ENST00000606319 477 ntTSL 3 BASIC17.12■□□□□ 0.33
CDH4P55283 MTX1-207ENST00000609421 1085 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
CDH4P55283 AC079781.4-201ENST00000641908 219 ntBASIC17.12■□□□□ 0.33
CDH4P55283 DNM2-201ENST00000355667 3541 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
CDH4P55283 RAD1-208ENST00000628399 1678 ntTSL 3 BASIC17.12■□□□□ 0.33
CDH4P55283 AKAP8P1-201ENST00000434743 1349 ntBASIC17.12■□□□□ 0.33
CDH4P55283 LGMN-202ENST00000393218 2115 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
CDH4P55283 PODNL1-202ENST00000339560 2165 ntAPPRIS P3 TSL 1 (best) BASIC17.12■□□□□ 0.33
CDH4P55283 WASH6P-202ENST00000359512 1437 ntBASIC17.12■□□□□ 0.33
CDH4P55283 PARVG-206ENST00000444313 3523 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
CDH4P55283 AMT-206ENST00000458307 1860 ntTSL 2 BASIC17.12■□□□□ 0.33
CDH4P55283 FUT5-201ENST00000252675 1916 ntAPPRIS P1 BASIC17.11■□□□□ 0.33
CDH4P55283 AC006538.1-201ENST00000567905 1585 ntBASIC17.11■□□□□ 0.33
CDH4P55283 FLVCR1-AS1-201ENST00000356684 2525 ntTSL 2 BASIC17.11■□□□□ 0.33
CDH4P55283 GTPBP3-201ENST00000324894 2579 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
CDH4P55283 ATP5S-201ENST00000245448 1671 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
CDH4P55283 SSBP3-205ENST00000417664 1666 ntTSL 5 BASIC17.11■□□□□ 0.33
CDH4P55283 IRF5-215ENST00000619830 1652 ntTSL 2 BASIC17.11■□□□□ 0.33
CDH4P55283 FOSB-209ENST00000590335 2170 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
CDH4P55283 EIF4H-201ENST00000265753 2679 ntAPPRIS P4 TSL 2 BASIC17.11■□□□□ 0.33
CDH4P55283 SLC7A2-205ENST00000522656 2274 ntAPPRIS ALT1 TSL 1 (best) BASIC17.11■□□□□ 0.33
CDH4P55283 RPS27A-201ENST00000272317 1071 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
CDH4P55283 GBGT1-201ENST00000372036 871 ntTSL 3 BASIC17.11■□□□□ 0.33
CDH4P55283 MRPS18A-202ENST00000372133 1062 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
CDH4P55283 TEX30-206ENST00000376032 1165 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
CDH4P55283 TFAMP1-201ENST00000412727 736 ntBASIC17.11■□□□□ 0.33
CDH4P55283 AC254562.1-201ENST00000417586 456 ntBASIC17.11■□□□□ 0.33
CDH4P55283 DARS-AS1-203ENST00000438432 768 ntTSL 3 BASIC17.11■□□□□ 0.33
CDH4P55283 TWIST2-201ENST00000448943 1176 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
CDH4P55283 AL390729.1-201ENST00000456651 587 ntTSL 2 BASIC17.11■□□□□ 0.33
CDH4P55283 GATB-205ENST00000508611 605 ntTSL 2 BASIC17.11■□□□□ 0.33
CDH4P55283 AC243965.1-201ENST00000557595 781 ntTSL 3 BASIC17.11■□□□□ 0.33
CDH4P55283 AC133550.1-201ENST00000563565 295 ntTSL 3 BASIC17.11■□□□□ 0.33
CDH4P55283 TMEM88-202ENST00000574668 510 ntTSL 2 BASIC17.11■□□□□ 0.33
CDH4P55283 AP002449.1-201ENST00000588211 474 ntTSL 2 BASIC17.11■□□□□ 0.33
CDH4P55283 AC026120.1-201ENST00000611536 926 ntBASIC17.11■□□□□ 0.33
CDH4P55283 AC010478.1-202ENST00000559112 2367 ntTSL 2 BASIC17.11■□□□□ 0.33
CDH4P55283 TMTC4-203ENST00000376234 3483 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
CDH4P55283 NPM2-203ENST00000397940 1874 ntAPPRIS P2 TSL 2 BASIC17.11■□□□□ 0.33
CDH4P55283 TINF2-208ENST00000558566 1874 ntAPPRIS ALT2 TSL 2 BASIC17.11■□□□□ 0.33
CDH4P55283 REEP2-211ENST00000613650 1944 ntTSL 5 BASIC17.11■□□□□ 0.33
CDH4P55283 AC022211.2-201ENST00000585075 2527 ntBASIC17.11■□□□□ 0.33
CDH4P55283 LFNG-207ENST00000614382 1969 ntTSL 5 BASIC17.11■□□□□ 0.33
CDH4P55283 AC078925.2-201ENST00000624013 1973 ntBASIC17.11■□□□□ 0.33
CDH4P55283 STK32C-204ENST00000368622 2010 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
CDH4P55283 ABCF3-203ENST00000429586 2624 ntAPPRIS P2 TSL 1 (best) BASIC17.11■□□□□ 0.33
CDH4P55283 DHRS1-201ENST00000288111 1480 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
CDH4P55283 AP2A2-222ENST00000534328 1491 ntTSL 5 BASIC17.11■□□□□ 0.33
CDH4P55283 TNIP1-208ENST00000520931 2680 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
CDH4P55283 AGFG1-201ENST00000310078 8668 ntAPPRIS P3 TSL 1 (best) BASIC17.11■□□□□ 0.33
CDH4P55283 AKIRIN1-202ENST00000432648 2741 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
CDH4P55283 HPCAL1-208ENST00000622018 1535 ntAPPRIS P1 TSL 5 BASIC17.11■□□□□ 0.33
CDH4P55283 RNF222-201ENST00000344001 2786 ntAPPRIS P1 BASIC17.11■□□□□ 0.33
CDH4P55283 KDM6A-213ENST00000611820 5924 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
CDH4P55283 ZFAND6-211ENST00000559157 1559 ntTSL 2 BASIC17.11■□□□□ 0.33
CDH4P55283 MZT1-201ENST00000377818 2299 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
CDH4P55283 RGL3-202ENST00000393423 2278 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
CDH4P55283 WWTR1-204ENST00000467467 1603 ntAPPRIS P1 TSL 5 BASIC17.1■□□□□ 0.33
CDH4P55283 RHBDF1-201ENST00000262316 2992 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
CDH4P55283 AIFM3-201ENST00000399163 2309 ntAPPRIS ALT1 TSL 1 (best) BASIC17.1■□□□□ 0.33
CDH4P55283 MAGEA4-206ENST00000393921 1727 ntAPPRIS P1 TSL 5 BASIC17.1■□□□□ 0.33
CDH4P55283 DKFZP434K028-202ENST00000536405 2466 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
CDH4P55283 TMEM138-201ENST00000278826 1848 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
CDH4P55283 DGKE-204ENST00000572810 1843 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
CDH4P55283 CRELD1-201ENST00000326434 1994 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
CDH4P55283 CRYBA2-201ENST00000295728 893 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
CDH4P55283 NDUFA4L2-201ENST00000393825 1186 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
CDH4P55283 LINC00899-202ENST00000444890 493 ntTSL 3 BASIC17.1■□□□□ 0.33
CDH4P55283 RN7SL589P-201ENST00000481268 310 ntBASIC17.1■□□□□ 0.33
CDH4P55283 SEC24B-AS1-201ENST00000499359 957 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
CDH4P55283 SEC24B-AS1-203ENST00000505895 800 ntTSL 4 BASIC17.1■□□□□ 0.33
CDH4P55283 SEC24B-AS1-204ENST00000510971 554 ntTSL 4 BASIC17.1■□□□□ 0.33
CDH4P55283 IGFLR1-205ENST00000588992 730 ntAPPRIS ALT2 TSL 2 BASIC17.1■□□□□ 0.33
CDH4P55283 PRELID3A-208ENST00000590956 777 ntTSL 2 BASIC17.1■□□□□ 0.33
CDH4P55283 ACYP2-209ENST00000607452 831 ntTSL 2 BASIC17.1■□□□□ 0.33
CDH4P55283 HNRNPH1-250ENST00000630639 123 ntTSL 5 BASIC17.1■□□□□ 0.33
CDH4P55283 AC247036.6-201ENST00000632950 410 ntAPPRIS P1 BASIC17.1■□□□□ 0.33
CDH4P55283 EML3-201ENST00000278845 3017 ntAPPRIS ALT1 TSL 5 BASIC17.1■□□□□ 0.33
CDH4P55283 C18orf8-201ENST00000269221 2162 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
CDH4P55283 GXYLT2-201ENST00000389617 3260 ntAPPRIS P1 TSL 5 BASIC17.1■□□□□ 0.33
CDH4P55283 CCT6A-202ENST00000335503 2529 ntTSL 5 BASIC17.1■□□□□ 0.33
CDH4P55283 BEND4-202ENST00000504360 8692 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
CDH4P55283 AC053503.2-201ENST00000420563 1598 ntTSL 2 BASIC17.1■□□□□ 0.33
CDH4P55283 ZFYVE19-203ENST00000355341 2775 ntAPPRIS P3 TSL 1 (best) BASIC17.1■□□□□ 0.33
CDH4P55283 CDK2-204ENST00000553376 1725 ntTSL 5 BASIC17.1■□□□□ 0.33
CDH4P55283 AL512652.2-201ENST00000625156 1716 ntBASIC17.1■□□□□ 0.33
CDH4P55283 NLRP6-203ENST00000534750 2936 ntAPPRIS ALT2 TSL 2 BASIC17.1■□□□□ 0.33
CDH4P55283 CYB5R3-204ENST00000407332 1849 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
CDH4P55283 CLYBL-203ENST00000376355 6771 ntAPPRIS P1 TSL 2 BASIC17.1■□□□□ 0.33
CDH4P55283 DNAJB2-201ENST00000336576 3176 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
CDH4P55283 MIB2-201ENST00000355826 3290 ntAPPRIS ALT2 TSL 1 (best) BASIC17.09■□□□□ 0.33
CDH4P55283 ABLIM2-203ENST00000361737 3396 ntAPPRIS ALT2 TSL 2 BASIC17.09■□□□□ 0.33
CDH4P55283 SFT2D3-201ENST00000310981 3735 ntAPPRIS P1 BASIC17.09■□□□□ 0.33
Retrieved 100 of 98,524 protein–RNA pairs in 38.1 ms