Protein–RNA interactions for Protein: P54829

PTPN5, Tyrosine-protein phosphatase non-receptor type 5, humanhuman

Predictions only

Length 565 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN5P54829 PIK3R2-201ENST00000222254 4033 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
PTPN5P54829 CYP2W1-202ENST00000340150 2361 ntTSL 2 BASIC17.32■□□□□ 0.36
PTPN5P54829 UXT-AS1-201ENST00000590504 1525 ntBASIC17.32■□□□□ 0.36
PTPN5P54829 TMEM214-201ENST00000238788 2990 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
PTPN5P54829 LGMN-201ENST00000334869 2055 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
PTPN5P54829 URAHP-203ENST00000517889 1381 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
PTPN5P54829 KIF25-201ENST00000351261 1326 ntTSL 5 BASIC17.32■□□□□ 0.36
PTPN5P54829 MORN4-202ENST00000370635 419 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
PTPN5P54829 ACTG1P4-201ENST00000425123 1122 ntBASIC17.32■□□□□ 0.36
PTPN5P54829 SPCS2P4-201ENST00000436160 681 ntBASIC17.32■□□□□ 0.36
PTPN5P54829 FKBP11-203ENST00000453172 959 ntAPPRIS ALT2 TSL 2 BASIC17.32■□□□□ 0.36
PTPN5P54829 AC087276.3-201ENST00000526220 787 ntTSL 3 BASIC17.32■□□□□ 0.36
PTPN5P54829 KRTAP5-9-201ENST00000528743 1136 ntAPPRIS P1 BASIC17.32■□□□□ 0.36
PTPN5P54829 LINC01220-201ENST00000558575 715 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
PTPN5P54829 AC009053.3-201ENST00000567148 574 ntTSL 4 BASIC17.32■□□□□ 0.36
PTPN5P54829 ACTL9-202ENST00000612068 1252 ntBASIC17.32■□□□□ 0.36
PTPN5P54829 RETN-203ENST00000629642 400 ntTSL 5 BASIC17.32■□□□□ 0.36
PTPN5P54829 PCCB-209ENST00000469217 1841 ntAPPRIS ALT2 TSL 2 BASIC17.32■□□□□ 0.36
PTPN5P54829 KCNC4-204ENST00000438661 2953 ntAPPRIS ALT2 TSL 1 (best) BASIC17.32■□□□□ 0.36
PTPN5P54829 MTHFD2L-203ENST00000395759 2354 ntAPPRIS P2 TSL 5 BASIC17.32■□□□□ 0.36
PTPN5P54829 RUVBL1-201ENST00000322623 1761 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
PTPN5P54829 ST8SIA4-202ENST00000451528 1794 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
PTPN5P54829 MYBPH-202ENST00000621380 1772 ntTSL 5 BASIC17.32■□□□□ 0.36
PTPN5P54829 AGFG1-201ENST00000310078 8668 ntAPPRIS P3 TSL 1 (best) BASIC17.32■□□□□ 0.36
PTPN5P54829 VRK1-201ENST00000216639 1745 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
PTPN5P54829 PRR15-201ENST00000319694 1678 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
PTPN5P54829 MAP3K13-212ENST00000448876 1681 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
PTPN5P54829 HMGXB3-206ENST00000613459 5567 ntAPPRIS ALT2 TSL 5 BASIC17.32■□□□□ 0.36
PTPN5P54829 LAT-203ENST00000395456 1616 ntAPPRIS ALT2 TSL 1 (best) BASIC17.32■□□□□ 0.36
PTPN5P54829 ARHGEF18-201ENST00000319670 5212 ntAPPRIS P3 TSL 1 (best) BASIC17.32■□□□□ 0.36
PTPN5P54829 ASCC2-223ENST00000542393 2594 ntTSL 2 BASIC17.32■□□□□ 0.36
PTPN5P54829 TMEM132A-201ENST00000005286 3480 ntAPPRIS P3 TSL 5 BASIC17.31■□□□□ 0.36
PTPN5P54829 ITGB4-201ENST00000200181 5919 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
PTPN5P54829 LINC01205-202ENST00000497996 1493 ntTSL 2 BASIC17.31■□□□□ 0.36
PTPN5P54829 VASH1-201ENST00000167106 5728 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
PTPN5P54829 SLC18A1-203ENST00000381608 1419 ntTSL 5 BASIC17.31■□□□□ 0.36
PTPN5P54829 WNT5B-202ENST00000397196 2303 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
PTPN5P54829 GMDS-AS1-201ENST00000456943 2308 ntTSL 2 BASIC17.31■□□□□ 0.36
PTPN5P54829 ADSL-202ENST00000342312 1808 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
PTPN5P54829 MZT1-201ENST00000377818 2299 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
PTPN5P54829 HFE2-201ENST00000336751 2234 ntAPPRIS P1 TSL 2 BASIC17.31■□□□□ 0.36
PTPN5P54829 CORO1A-208ENST00000565497 1348 ntTSL 5 BASIC17.31■□□□□ 0.36
PTPN5P54829 UBL3-201ENST00000380680 4384 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
PTPN5P54829 PDE4D-204ENST00000358923 2969 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
PTPN5P54829 VCX3B-202ENST00000381032 1171 ntAPPRIS P2 TSL 5 BASIC17.31■□□□□ 0.36
PTPN5P54829 LINC00659-201ENST00000412500 540 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
PTPN5P54829 AC073130.2-202ENST00000444244 842 ntTSL 3 BASIC17.31■□□□□ 0.36
PTPN5P54829 NME2-206ENST00000513177 692 ntAPPRIS P1 TSL 2 BASIC17.31■□□□□ 0.36
PTPN5P54829 TPT1-AS1-219ENST00000523506 574 ntTSL 4 BASIC17.31■□□□□ 0.36
PTPN5P54829 LGALS9C-215ENST00000584941 1104 ntTSL 5 BASIC17.31■□□□□ 0.36
PTPN5P54829 TEAD2-204ENST00000593945 2141 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
PTPN5P54829 AC010336.6-201ENST00000595107 528 ntTSL 4 BASIC17.31■□□□□ 0.36
PTPN5P54829 Metazoa_SRP.112-201ENST00000613101 279 ntBASIC17.31■□□□□ 0.36
PTPN5P54829 AL135999.2-201ENST00000622438 1686 ntBASIC17.31■□□□□ 0.36
PTPN5P54829 AC116353.5-201ENST00000638148 1699 ntBASIC17.31■□□□□ 0.36
PTPN5P54829 CCDC137-201ENST00000329214 2468 ntAPPRIS P2 TSL 1 (best) BASIC17.31■□□□□ 0.36
PTPN5P54829 TUBB2B-201ENST00000259818 2020 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
PTPN5P54829 RAI2-203ENST00000415486 2037 ntTSL 2 BASIC17.31■□□□□ 0.36
PTPN5P54829 EXD3-203ENST00000465160 1585 ntTSL 2 BASIC17.31■□□□□ 0.36
PTPN5P54829 AC022144.1-201ENST00000602255 1580 ntBASIC17.31■□□□□ 0.36
PTPN5P54829 CHAC1-204ENST00000617768 1560 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
PTPN5P54829 SLC9A6-208ENST00000636206 4711 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
PTPN5P54829 C3orf18-201ENST00000357203 2655 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
PTPN5P54829 MGLL-204ENST00000434178 4941 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
PTPN5P54829 MAGI3-201ENST00000307546 6430 ntTSL 5 BASIC17.31■□□□□ 0.36
PTPN5P54829 RAB4B-EGLN2-201ENST00000594136 2554 ntAPPRIS P1 TSL 2 BASIC17.31■□□□□ 0.36
PTPN5P54829 HOXA2-201ENST00000222718 1814 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
PTPN5P54829 ZNF419-204ENST00000415379 2186 ntAPPRIS ALT2 TSL 2 BASIC17.3■□□□□ 0.36
PTPN5P54829 CDK11A-203ENST00000357760 2446 ntAPPRIS ALT1 TSL 1 (best) BASIC17.3■□□□□ 0.36
PTPN5P54829 CDK11A-204ENST00000358779 2419 ntAPPRIS ALT1 TSL 1 (best) BASIC17.3■□□□□ 0.36
PTPN5P54829 CDK11A-206ENST00000378638 2429 ntTSL 5 BASIC17.3■□□□□ 0.36
PTPN5P54829 CDK11A-208ENST00000404249 2449 ntAPPRIS P4 TSL 1 (best) BASIC17.3■□□□□ 0.36
PTPN5P54829 LTB4R2-202ENST00000528054 3092 ntBASIC17.3■□□□□ 0.36
PTPN5P54829 CROCC2-201ENST00000443866 5382 ntAPPRIS P1 TSL 5 BASIC17.3■□□□□ 0.36
PTPN5P54829 AC068888.1-203ENST00000546566 1650 ntTSL 2 BASIC17.3■□□□□ 0.36
PTPN5P54829 YY1AP1-206ENST00000359205 2690 ntAPPRIS ALT2 TSL 1 (best) BASIC17.3■□□□□ 0.36
PTPN5P54829 DENND6B-201ENST00000413817 4939 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
PTPN5P54829 ARFGAP2-229ENST00000627920 2613 ntTSL 2 BASIC17.3■□□□□ 0.36
PTPN5P54829 DMKN-201ENST00000339686 1927 ntAPPRIS P3 TSL 1 (best) BASIC17.3■□□□□ 0.36
PTPN5P54829 COX6A1-201ENST00000229379 572 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
PTPN5P54829 GRHPR-201ENST00000318158 1280 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
PTPN5P54829 CHIA-203ENST00000353665 1214 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
PTPN5P54829 NGF-201ENST00000369512 1047 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
PTPN5P54829 AC012574.2-201ENST00000520375 443 ntTSL 3 BASIC17.3■□□□□ 0.36
PTPN5P54829 BATF2-204ENST00000527716 1230 ntTSL 2 BASIC17.3■□□□□ 0.36
PTPN5P54829 TUBA1A-203ENST00000546918 984 ntTSL 3 BASIC17.3■□□□□ 0.36
PTPN5P54829 CD63-208ENST00000549117 1233 ntAPPRIS P1 TSL 3 BASIC17.3■□□□□ 0.36
PTPN5P54829 AC106886.1-201ENST00000568660 600 ntBASIC17.3■□□□□ 0.36
PTPN5P54829 AC002985.2-201ENST00000601106 957 ntTSL 4 BASIC17.3■□□□□ 0.36
PTPN5P54829 LGI4-201ENST00000310123 2814 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
PTPN5P54829 RGS3-211ENST00000462403 2155 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
PTPN5P54829 GPER1-204ENST00000401670 1542 ntAPPRIS P1 TSL 2 BASIC17.3■□□□□ 0.36
PTPN5P54829 GCSH-209ENST00000639689 2412 ntTSL 5 BASIC17.3■□□□□ 0.36
PTPN5P54829 TMEM145-201ENST00000301204 1768 ntAPPRIS P2 TSL 2 BASIC17.3■□□□□ 0.36
PTPN5P54829 AP2A2-222ENST00000534328 1491 ntTSL 5 BASIC17.3■□□□□ 0.36
PTPN5P54829 MMP9-201ENST00000372330 2336 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
PTPN5P54829 NPRL2-201ENST00000232501 1700 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
PTPN5P54829 EI24-214ENST00000620753 1718 ntAPPRIS P1 TSL 5 BASIC17.3■□□□□ 0.36
PTPN5P54829 PKP3-201ENST00000331563 2809 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
PTPN5P54829 GOLGA7-204ENST00000520817 1984 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Retrieved 100 of 98,524 protein–RNA pairs in 26.2 ms