Protein–RNA interactions for Protein: P54727

RAD23B, UV excision repair protein RAD23 homolog B, humanhuman

Predictions only

Length 409 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAD23BP54727 PDE1C-201ENST00000321453 2898 ntAPPRIS ALT1 TSL 2 BASIC17.96■□□□□ 0.47
RAD23BP54727 LINC00200-201ENST00000425630 2434 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
RAD23BP54727 RBM47-212ENST00000514014 2419 ntTSL 2 BASIC17.96■□□□□ 0.47
RAD23BP54727 KLHL7-201ENST00000322275 969 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
RAD23BP54727 ELK1-202ENST00000343894 736 ntAPPRIS ALT2 TSL 1 (best) BASIC17.96■□□□□ 0.47
RAD23BP54727 HMGN1-203ENST00000380748 829 ntTSL 3 BASIC17.96■□□□□ 0.47
RAD23BP54727 HS6ST1P1-201ENST00000481504 1234 ntBASIC17.96■□□□□ 0.47
RAD23BP54727 BX890604.1-208ENST00000490920 726 ntTSL 2 BASIC17.96■□□□□ 0.47
RAD23BP54727 MRVI1-AS1-203ENST00000529979 784 ntTSL 3 BASIC17.96■□□□□ 0.47
RAD23BP54727 LRRC28-210ENST00000558879 581 ntTSL 4 BASIC17.96■□□□□ 0.47
RAD23BP54727 AC092384.3-201ENST00000561980 531 ntTSL 4 BASIC17.96■□□□□ 0.47
RAD23BP54727 AC104758.1-202ENST00000568184 602 ntTSL 3 BASIC17.96■□□□□ 0.47
RAD23BP54727 AC018845.2-201ENST00000568326 409 ntBASIC17.96■□□□□ 0.47
RAD23BP54727 AC013565.3-202ENST00000570120 460 ntTSL 2 BASIC17.96■□□□□ 0.47
RAD23BP54727 AC013467.2-201ENST00000605472 835 ntBASIC17.96■□□□□ 0.47
RAD23BP54727 FAM197Y3-203ENST00000618346 717 ntBASIC17.96■□□□□ 0.47
RAD23BP54727 INPP5J-213ENST00000620191 2306 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
RAD23BP54727 C16orf71-204ENST00000590191 2564 ntAPPRIS ALT2 TSL 5 BASIC17.96■□□□□ 0.47
RAD23BP54727 ANKRD24-202ENST00000318934 3906 ntAPPRIS P2 TSL 5 BASIC17.96■□□□□ 0.47
RAD23BP54727 ZNF133-206ENST00000402618 2622 ntTSL 2 BASIC17.96■□□□□ 0.47
RAD23BP54727 COPS3-212ENST00000539941 1699 ntTSL 2 BASIC17.96■□□□□ 0.47
RAD23BP54727 CD1D-201ENST00000368171 2253 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
RAD23BP54727 PTGES3-201ENST00000262033 1920 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
RAD23BP54727 C2orf27A-205ENST00000624391 1335 ntTSL 1 (best) BASIC17.96■□□□□ 0.46
RAD23BP54727 KCNQ2-202ENST00000344462 2750 ntAPPRIS ALT2 TSL 1 (best) BASIC17.96■□□□□ 0.46
RAD23BP54727 ZFYVE28-208ENST00000511071 3273 ntAPPRIS ALT2 TSL 5 BASIC17.96■□□□□ 0.46
RAD23BP54727 GTPBP3-201ENST00000324894 2579 ntAPPRIS ALT2 TSL 1 (best) BASIC17.95■□□□□ 0.46
RAD23BP54727 DPP9-AS1-201ENST00000381796 3071 ntTSL 2 BASIC17.95■□□□□ 0.46
RAD23BP54727 AC131009.4-201ENST00000624048 1740 ntBASIC17.95■□□□□ 0.46
RAD23BP54727 ASPH-211ENST00000518068 2744 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
RAD23BP54727 SFT2D3-201ENST00000310981 3735 ntAPPRIS P1 BASIC17.95■□□□□ 0.46
RAD23BP54727 KIFC2-201ENST00000301332 3646 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
RAD23BP54727 ARHGEF28-214ENST00000545377 6351 ntAPPRIS P3 TSL 5 BASIC17.95■□□□□ 0.46
RAD23BP54727 NKIRAS1-206ENST00000425478 2014 ntAPPRIS P2 TSL 1 (best) BASIC17.95■□□□□ 0.46
RAD23BP54727 C2orf50-201ENST00000381585 2684 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
RAD23BP54727 SFTPC-201ENST00000318561 997 ntAPPRIS P3 TSL 1 (best) BASIC17.95■□□□□ 0.46
RAD23BP54727 ICOSLG-201ENST00000344330 1009 ntAPPRIS ALT2 TSL 1 (best) BASIC17.95■□□□□ 0.46
RAD23BP54727 CKLF-204ENST00000362093 412 ntAPPRIS ALT2 TSL 1 (best) BASIC17.95■□□□□ 0.46
RAD23BP54727 ICAM2-202ENST00000418105 1252 ntAPPRIS P1 TSL 3 BASIC17.95■□□□□ 0.46
RAD23BP54727 MED15P5-201ENST00000423150 992 ntBASIC17.95■□□□□ 0.46
RAD23BP54727 AL591424.1-201ENST00000442569 1213 ntBASIC17.95■□□□□ 0.46
RAD23BP54727 SLC26A4-AS1-202ENST00000449741 586 ntTSL 4 BASIC17.95■□□□□ 0.46
RAD23BP54727 AP002490.2-201ENST00000524791 560 ntBASIC17.95■□□□□ 0.46
RAD23BP54727 IL18BP-211ENST00000531053 853 ntAPPRIS ALT2 TSL 2 BASIC17.95■□□□□ 0.46
RAD23BP54727 ANAPC11-210ENST00000574924 722 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
RAD23BP54727 ICAM2-208ENST00000579788 1103 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
RAD23BP54727 GIPC1-213ENST00000591349 1068 ntTSL 2 BASIC17.95■□□□□ 0.46
RAD23BP54727 CAND2-206ENST00000626378 333 ntTSL 5 BASIC17.95■□□□□ 0.46
RAD23BP54727 ZNF232-201ENST00000250076 2179 ntAPPRIS P3 TSL 5 BASIC17.95■□□□□ 0.46
RAD23BP54727 ADNP2-201ENST00000262198 5393 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
RAD23BP54727 EWSR1-203ENST00000332050 2552 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
RAD23BP54727 AC099508.1-201ENST00000499110 1666 ntTSL 4 BASIC17.95■□□□□ 0.46
RAD23BP54727 ACSM2A-213ENST00000575690 2322 ntAPPRIS P1 TSL 2 BASIC17.95■□□□□ 0.46
RAD23BP54727 EDC3-202ENST00000426797 2093 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
RAD23BP54727 GPS1-228ENST00000624957 1825 ntAPPRIS ALT1 TSL 5 BASIC17.95■□□□□ 0.46
RAD23BP54727 C6orf132-201ENST00000341865 6210 ntAPPRIS P2 TSL 5 BASIC17.95■□□□□ 0.46
RAD23BP54727 PTPRC-206ENST00000413409 1338 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
RAD23BP54727 MAGEA4-206ENST00000393921 1727 ntAPPRIS P1 TSL 5 BASIC17.95■□□□□ 0.46
RAD23BP54727 MOAP1-202ENST00000556883 2529 ntAPPRIS P1 TSL 2 BASIC17.95■□□□□ 0.46
RAD23BP54727 ZNF423-206ENST00000563137 4911 ntAPPRIS ALT2 TSL 5 BASIC17.95■□□□□ 0.46
RAD23BP54727 MGAT1-203ENST00000393340 3077 ntAPPRIS P1 TSL 2 BASIC17.95■□□□□ 0.46
RAD23BP54727 PC-214ENST00000628663 1470 ntTSL 5 BASIC17.95■□□□□ 0.46
RAD23BP54727 AHSA2-202ENST00000394457 6574 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
RAD23BP54727 ZNF57-201ENST00000306908 2003 ntAPPRIS P2 TSL 1 (best) BASIC17.94■□□□□ 0.46
RAD23BP54727 EPB41L3-204ENST00000540638 3370 ntAPPRIS ALT2 TSL 1 (best) BASIC17.94■□□□□ 0.46
RAD23BP54727 ZNF57-205ENST00000614108 2002 ntAPPRIS ALT2 TSL 5 BASIC17.94■□□□□ 0.46
RAD23BP54727 FANCA-203ENST00000389302 1641 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
RAD23BP54727 ELP5-202ENST00000356683 2197 ntTSL 5 BASIC17.94■□□□□ 0.46
RAD23BP54727 PIGP-207ENST00000464265 3437 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
RAD23BP54727 AIDA-201ENST00000340020 3008 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
RAD23BP54727 POLR3E-202ENST00000359210 2469 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
RAD23BP54727 TBC1D28-201ENST00000345096 2789 ntAPPRIS P1 TSL 2 BASIC17.94■□□□□ 0.46
RAD23BP54727 AC010478.1-202ENST00000559112 2367 ntTSL 2 BASIC17.94■□□□□ 0.46
RAD23BP54727 RRAGD-202ENST00000369415 4900 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
RAD23BP54727 NFATC2-205ENST00000609507 2662 ntAPPRIS ALT2 TSL 1 (best) BASIC17.94■□□□□ 0.46
RAD23BP54727 MRNIP-201ENST00000292586 1238 ntAPPRIS P4 TSL 1 (best) BASIC17.94■□□□□ 0.46
RAD23BP54727 BEX3-201ENST00000361298 921 ntTSL 2 BASIC17.94■□□□□ 0.46
RAD23BP54727 AL049612.1-201ENST00000427017 694 ntTSL 5 BASIC17.94■□□□□ 0.46
RAD23BP54727 KRT18P3-201ENST00000451602 1288 ntBASIC17.94■□□□□ 0.46
RAD23BP54727 AL513480.1-201ENST00000451731 511 ntBASIC17.94■□□□□ 0.46
RAD23BP54727 BARX1-AS1-202ENST00000454594 307 ntTSL 3 BASIC17.94■□□□□ 0.46
RAD23BP54727 MOK-203ENST00000517966 1230 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
RAD23BP54727 CYB561D1-208ENST00000528785 1271 ntAPPRIS ALT1 TSL 5 BASIC17.94■□□□□ 0.46
RAD23BP54727 AQP6-205ENST00000618286 829 ntTSL 5 BASIC17.94■□□□□ 0.46
RAD23BP54727 SLC39A13-202ENST00000362021 2296 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
RAD23BP54727 TOM1L1-204ENST00000570371 2442 ntTSL 5 BASIC17.94■□□□□ 0.46
RAD23BP54727 SYT15-202ENST00000374323 6428 ntTSL 2 BASIC17.94■□□□□ 0.46
RAD23BP54727 ALDH3A1-212ENST00000494157 1572 ntTSL 3 BASIC17.94■□□□□ 0.46
RAD23BP54727 FBXO4-202ENST00000296812 1731 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
RAD23BP54727 GGT6-203ENST00000573591 1730 ntTSL 4 BASIC17.94■□□□□ 0.46
RAD23BP54727 LAD1-201ENST00000367313 2336 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
RAD23BP54727 FLJ38576-201ENST00000623820 2459 ntBASIC17.94■□□□□ 0.46
RAD23BP54727 GRB7-201ENST00000309156 2243 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
RAD23BP54727 ASAH1-231ENST00000636577 2129 ntTSL 5 BASIC17.93■□□□□ 0.46
RAD23BP54727 LFNG-207ENST00000614382 1969 ntTSL 5 BASIC17.93■□□□□ 0.46
RAD23BP54727 UBALD1-205ENST00000590891 2641 ntBASIC17.93■□□□□ 0.46
RAD23BP54727 CTNNAL1-201ENST00000325551 2490 ntAPPRIS P3 TSL 1 (best) BASIC17.93■□□□□ 0.46
RAD23BP54727 AL603756.1-201ENST00000606511 2163 ntBASIC17.93■□□□□ 0.46
RAD23BP54727 FTSJ1-202ENST00000348411 1892 ntAPPRIS P4 TSL 1 (best) BASIC17.93■□□□□ 0.46
RAD23BP54727 CD9-203ENST00000382518 1556 ntAPPRIS P1 TSL 5 BASIC17.93■□□□□ 0.46
Retrieved 100 of 98,524 protein–RNA pairs in 39.7 ms