Protein–RNA interactions for Protein: P54277

PMS1, PMS1 protein homolog 1, humanhuman

Known RBP Predictions only

Length 932 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PMS1P54277 AC008667.4-201ENST00000607370 168 ntBASIC18.47■□□□□ 0.55
PMS1P54277 SERPINB6-201ENST00000335686 1604 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
PMS1P54277 STK17A-201ENST00000319357 3368 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
PMS1P54277 L1CAM-203ENST00000370055 4655 ntTSL 5 BASIC18.47■□□□□ 0.55
PMS1P54277 ARHGEF25-202ENST00000333972 2246 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
PMS1P54277 TBRG4-203ENST00000395655 2225 ntTSL 2 BASIC18.47■□□□□ 0.55
PMS1P54277 FRMD6-AS1-201ENST00000617151 2229 ntBASIC18.47■□□□□ 0.55
PMS1P54277 ZBTB4-202ENST00000380599 5866 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
PMS1P54277 GPR176-205ENST00000561100 2816 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
PMS1P54277 TBC1D3D-201ENST00000616101 2116 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
PMS1P54277 TBC1D3K-201ENST00000620247 2116 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
PMS1P54277 NPR3-203ENST00000415167 1753 ntAPPRIS P3 TSL 1 (best) BASIC18.47■□□□□ 0.55
PMS1P54277 KRT8P39-201ENST00000396270 1433 ntBASIC18.47■□□□□ 0.55
PMS1P54277 ARFIP2-203ENST00000423813 1430 ntTSL 2 BASIC18.47■□□□□ 0.55
PMS1P54277 IRAK1-204ENST00000393687 2049 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
PMS1P54277 NSFL1C-201ENST00000216879 3568 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
PMS1P54277 INA-201ENST00000369849 3231 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
PMS1P54277 WASF1-207ENST00000392589 3220 ntAPPRIS P1 TSL 5 BASIC18.47■□□□□ 0.55
PMS1P54277 HOXA5-201ENST00000222726 1657 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
PMS1P54277 GNA13-201ENST00000439174 4922 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
PMS1P54277 SDR39U1-206ENST00000553930 1325 ntTSL 5 BASIC18.47■□□□□ 0.55
PMS1P54277 GALNT14-201ENST00000324589 2169 ntTSL 2 BASIC18.47■□□□□ 0.55
PMS1P54277 ABCB10-201ENST00000344517 3857 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
PMS1P54277 RECQL4-210ENST00000621189 3896 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
PMS1P54277 AC119396.1-201ENST00000576789 1558 ntAPPRIS P1 TSL 5 BASIC18.47■□□□□ 0.55
PMS1P54277 CFAP45-201ENST00000368099 1842 ntAPPRIS P2 TSL 1 (best) BASIC18.46■□□□□ 0.55
PMS1P54277 ELAVL2-208ENST00000544538 3789 ntAPPRIS P3 TSL 5 BASIC18.46■□□□□ 0.55
PMS1P54277 RGS3-206ENST00000374136 2092 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
PMS1P54277 AC004233.2-201ENST00000573315 2062 ntAPPRIS P1 TSL 5 BASIC18.46■□□□□ 0.55
PMS1P54277 ABHD10-201ENST00000273359 2590 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
PMS1P54277 GCAT-201ENST00000248924 1497 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
PMS1P54277 WDR4-201ENST00000330317 1471 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
PMS1P54277 ABTB1-201ENST00000232744 1965 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
PMS1P54277 PLCH2-203ENST00000378486 4837 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
PMS1P54277 PLCH2-204ENST00000419816 4837 ntAPPRIS P1 TSL 5 BASIC18.46■□□□□ 0.55
PMS1P54277 C16orf71-201ENST00000299320 2722 ntAPPRIS P2 TSL 1 (best) BASIC18.46■□□□□ 0.55
PMS1P54277 SLC9A5-201ENST00000299798 3736 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
PMS1P54277 LILRA6-201ENST00000245621 1395 ntAPPRIS ALT2 TSL 5 BASIC18.46■□□□□ 0.55
PMS1P54277 NKIRAS1-202ENST00000412028 1605 ntAPPRIS ALT1 TSL 5 BASIC18.46■□□□□ 0.55
PMS1P54277 BTN3A1-204ENST00000425234 1882 ntTSL 2 BASIC18.46■□□□□ 0.55
PMS1P54277 NAA50-209ENST00000497525 1385 ntTSL 2 BASIC18.46■□□□□ 0.55
PMS1P54277 SURF4-207ENST00000545297 2863 ntTSL 2 BASIC18.46■□□□□ 0.55
PMS1P54277 KDM6A-213ENST00000611820 5924 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
PMS1P54277 CD72-204ENST00000396757 2035 ntAPPRIS P2 TSL 5 BASIC18.46■□□□□ 0.55
PMS1P54277 PANK2-209ENST00000621507 1763 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
PMS1P54277 GFAP-233ENST00000639277 1783 ntTSL 5 BASIC18.46■□□□□ 0.55
PMS1P54277 TMEM234-202ENST00000344461 721 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
PMS1P54277 IGKV4-1-201ENST00000390243 538 ntAPPRIS P1 BASIC18.46■□□□□ 0.55
PMS1P54277 TREML1-203ENST00000437044 647 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
PMS1P54277 TCTN1-208ENST00000471804 718 ntTSL 3 BASIC18.46■□□□□ 0.55
PMS1P54277 IGHV3-65-201ENST00000523210 341 ntBASIC18.46■□□□□ 0.55
PMS1P54277 AP001107.6-201ENST00000526655 516 ntTSL 3 BASIC18.46■□□□□ 0.55
PMS1P54277 AC068594.1-202ENST00000581657 749 ntTSL 3 BASIC18.46■□□□□ 0.55
PMS1P54277 CYB561-216ENST00000582297 897 ntTSL 3 BASIC18.46■□□□□ 0.55
PMS1P54277 LINC00454-206ENST00000609861 841 ntTSL 5 BASIC18.46■□□□□ 0.55
PMS1P54277 ACY1-212ENST00000635797 1294 ntTSL 5 BASIC18.46■□□□□ 0.55
PMS1P54277 ARHGAP44-202ENST00000340825 4211 ntAPPRIS ALT2 TSL 1 (best) BASIC18.46■□□□□ 0.55
PMS1P54277 ARHGAP44-203ENST00000379672 4228 ntAPPRIS P3 TSL 1 (best) BASIC18.46■□□□□ 0.55
PMS1P54277 EGLN2-207ENST00000593726 2821 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
PMS1P54277 PDE4DIP-230ENST00000530472 1690 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
PMS1P54277 NEUROD1-201ENST00000295108 2852 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
PMS1P54277 TBC1D20-201ENST00000354200 4466 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
PMS1P54277 CTCFL-215ENST00000608158 1984 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
PMS1P54277 KIF25-201ENST00000351261 1326 ntTSL 5 BASIC18.46■□□□□ 0.55
PMS1P54277 CDK2-204ENST00000553376 1725 ntTSL 5 BASIC18.46■□□□□ 0.55
PMS1P54277 SIGLEC10-205ENST00000439889 2126 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
PMS1P54277 CBSL-201ENST00000398168 2514 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
PMS1P54277 IL11-201ENST00000264563 2281 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.54
PMS1P54277 ZIC1-201ENST00000282928 5241 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.54
PMS1P54277 CYP51A1P2-201ENST00000419457 1499 ntBASIC18.46■□□□□ 0.54
PMS1P54277 GBA2-203ENST00000378103 3611 ntAPPRIS P3 TSL 1 (best) BASIC18.46■□□□□ 0.54
PMS1P54277 PMS1-213ENST00000441310 3225 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
PMS1P54277 SMAP1-201ENST00000316999 2403 ntAPPRIS P3 TSL 1 (best) BASIC18.45■□□□□ 0.54
PMS1P54277 CIAPIN1-209ENST00000567518 2016 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
PMS1P54277 CCNC-209ENST00000520371 2186 ntTSL 5 BASIC18.45■□□□□ 0.54
PMS1P54277 SERF2-203ENST00000381359 1931 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
PMS1P54277 TMED7-TICAM2-201ENST00000282382 3491 ntAPPRIS P1 TSL 2 BASIC18.45■□□□□ 0.54
PMS1P54277 FAM49B-202ENST00000517654 1817 ntAPPRIS P1 TSL 5 BASIC18.45■□□□□ 0.54
PMS1P54277 PDCD1-201ENST00000334409 2114 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
PMS1P54277 SMIM29-201ENST00000335352 1160 ntTSL 2 BASIC18.45■□□□□ 0.54
PMS1P54277 DNAH14-205ENST00000366850 1103 ntTSL 5 BASIC18.45■□□□□ 0.54
PMS1P54277 RALGDS-205ENST00000393160 3801 ntAPPRIS ALT2 TSL 1 (best) BASIC18.45■□□□□ 0.54
PMS1P54277 MCFD2-208ENST00000409973 821 ntAPPRIS P1 TSL 2 BASIC18.45■□□□□ 0.54
PMS1P54277 AL591212.1-201ENST00000433646 615 ntTSL 5 BASIC18.45■□□□□ 0.54
PMS1P54277 NDUFB2-208ENST00000471136 499 ntTSL 3 BASIC18.45■□□□□ 0.54
PMS1P54277 AC106791.1-202ENST00000508281 1148 ntTSL 2 BASIC18.45■□□□□ 0.54
PMS1P54277 AL512357.1-201ENST00000557687 518 ntTSL 4 BASIC18.45■□□□□ 0.54
PMS1P54277 NAA60-217ENST00000572942 1089 ntTSL 2 BASIC18.45■□□□□ 0.54
PMS1P54277 AC091167.2-201ENST00000579581 588 ntBASIC18.45■□□□□ 0.54
PMS1P54277 FSTL3-206ENST00000592947 2144 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
PMS1P54277 CYP2A7P1-201ENST00000595391 815 ntBASIC18.45■□□□□ 0.54
PMS1P54277 AL049840.3-201ENST00000602669 611 ntBASIC18.45■□□□□ 0.54
PMS1P54277 AL356488.2-201ENST00000602755 427 ntBASIC18.45■□□□□ 0.54
PMS1P54277 ZEB1-AS1-209ENST00000607455 559 ntTSL 4 BASIC18.45■□□□□ 0.54
PMS1P54277 IRF5-214ENST00000613821 595 ntTSL 5 BASIC18.45■□□□□ 0.54
PMS1P54277 MAGIX-204ENST00000614074 778 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
PMS1P54277 LINC01666-201ENST00000623794 845 ntTSL 5 BASIC18.45■□□□□ 0.54
PMS1P54277 CDC42EP4-201ENST00000335793 3272 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
PMS1P54277 LMCD1-204ENST00000426878 1431 ntTSL 2 BASIC18.45■□□□□ 0.54
PMS1P54277 ADD1-201ENST00000264758 4045 ntAPPRIS P3 TSL 5 BASIC18.45■□□□□ 0.54
Retrieved 100 of 98,524 protein–RNA pairs in 28.2 ms