Protein–RNA interactions for Protein: P53671

LIMK2, LIM domain kinase 2, humanhuman

Predictions only

Length 638 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LIMK2P53671 CACNA1A-201ENST00000360228 8627 ntAPPRIS P4 TSL 1 (best) BASIC16.95■□□□□ 0.3
LIMK2P53671 ETV3L-201ENST00000454449 1976 ntAPPRIS P1 TSL 2 BASIC16.95■□□□□ 0.3
LIMK2P53671 CTSO-201ENST00000433477 2954 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
LIMK2P53671 AL391005.1-201ENST00000623953 2435 ntBASIC16.95■□□□□ 0.3
LIMK2P53671 MAP3K9-206ENST00000555993 4449 ntAPPRIS P3 TSL 1 (best) BASIC16.95■□□□□ 0.3
LIMK2P53671 WASF1-206ENST00000392588 3122 ntAPPRIS P1 TSL 5 BASIC16.94■□□□□ 0.3
LIMK2P53671 CSNK1D-204ENST00000398519 1580 ntTSL 5 BASIC16.94■□□□□ 0.3
LIMK2P53671 IKBKE-204ENST00000584998 2487 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
LIMK2P53671 BTG3-202ENST00000348354 1456 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
LIMK2P53671 DCST1-201ENST00000295542 2279 ntAPPRIS P3 TSL 2 BASIC16.94■□□□□ 0.3
LIMK2P53671 BANP-204ENST00000393208 2283 ntTSL 2 BASIC16.94■□□□□ 0.3
LIMK2P53671 RCOR3-204ENST00000452621 1827 ntTSL 2 BASIC16.94■□□□□ 0.3
LIMK2P53671 SLC43A3-203ENST00000395124 2617 ntAPPRIS P3 TSL 1 (best) BASIC16.94■□□□□ 0.3
LIMK2P53671 ZNF517-202ENST00000525105 1383 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
LIMK2P53671 MAP3K9-201ENST00000381250 4025 ntAPPRIS ALT2 TSL 5 BASIC16.94■□□□□ 0.3
LIMK2P53671 PCMTD1-206ENST00000521344 1712 ntTSL 3 BASIC16.94■□□□□ 0.3
LIMK2P53671 VCAN-204ENST00000502527 2087 ntAPPRIS ALT1 TSL 1 (best) BASIC16.94■□□□□ 0.3
LIMK2P53671 TMC4-209ENST00000617472 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC16.94■□□□□ 0.3
LIMK2P53671 PLGRKT-201ENST00000223864 932 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
LIMK2P53671 COLEC11-202ENST00000349077 1259 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
LIMK2P53671 VMO1-202ENST00000354194 651 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
LIMK2P53671 MIR1233-2-201ENST00000408138 82 ntBASIC16.94■□□□□ 0.3
LIMK2P53671 MIR1233-1-201ENST00000408722 82 ntBASIC16.94■□□□□ 0.3
LIMK2P53671 SCRN1-203ENST00000409570 535 ntTSL 4 BASIC16.94■□□□□ 0.3
LIMK2P53671 UBXN1-210ENST00000529640 1110 ntAPPRIS ALT1 TSL 5 BASIC16.94■□□□□ 0.3
LIMK2P53671 ARMC7-204ENST00000582136 1204 ntTSL 2 BASIC16.94■□□□□ 0.3
LIMK2P53671 CYB561-217ENST00000582997 877 ntTSL 5 BASIC16.94■□□□□ 0.3
LIMK2P53671 TNFRSF13B-206ENST00000583789 859 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
LIMK2P53671 IER2-202ENST00000587885 1291 ntAPPRIS P1 TSL 3 BASIC16.94■□□□□ 0.3
LIMK2P53671 CYGB-205ENST00000590175 830 ntTSL 3 BASIC16.94■□□□□ 0.3
LIMK2P53671 SMIM22-210ENST00000615471 928 ntAPPRIS ALT2 TSL 3 BASIC16.94■□□□□ 0.3
LIMK2P53671 POLR3H-202ENST00000355209 4416 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
LIMK2P53671 EYA2-201ENST00000317304 1540 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
LIMK2P53671 ZNF281-203ENST00000367353 3080 ntAPPRIS P3 TSL 1 (best) BASIC16.94■□□□□ 0.3
LIMK2P53671 ITGB4-201ENST00000200181 5919 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
LIMK2P53671 PAPD5-202ENST00000436909 4635 ntAPPRIS P1 TSL 2 BASIC16.94■□□□□ 0.3
LIMK2P53671 SRRM2-201ENST00000301740 9353 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
LIMK2P53671 MPIG6B-204ENST00000375809 2396 ntAPPRIS ALT2 TSL 1 (best) BASIC16.94■□□□□ 0.3
LIMK2P53671 ANAPC13-206ENST00000514612 1420 ntAPPRIS P1 TSL 2 BASIC16.94■□□□□ 0.3
LIMK2P53671 TVP23B-202ENST00000476139 2989 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
LIMK2P53671 KRT35-202ENST00000393989 1670 ntAPPRIS P1 TSL 5 BASIC16.94■□□□□ 0.3
LIMK2P53671 PCDHGA11-202ENST00000518882 2263 ntAPPRIS ALT2 TSL 1 (best) BASIC16.94■□□□□ 0.3
LIMK2P53671 TMC3-AS1-203ENST00000559781 2195 ntTSL 3 BASIC16.94■□□□□ 0.3
LIMK2P53671 ATG3-201ENST00000283290 1570 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
LIMK2P53671 ARHGEF28-214ENST00000545377 6351 ntAPPRIS P3 TSL 5 BASIC16.93■□□□□ 0.3
LIMK2P53671 INPP5B-201ENST00000373021 3934 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
LIMK2P53671 PSMD6-210ENST00000492933 1495 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
LIMK2P53671 LANCL3-201ENST00000378619 3063 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
LIMK2P53671 ZNF423-206ENST00000563137 4911 ntAPPRIS ALT2 TSL 5 BASIC16.93■□□□□ 0.3
LIMK2P53671 CYP2R1-201ENST00000334636 2235 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
LIMK2P53671 TRIM11-201ENST00000284551 2715 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
LIMK2P53671 RAD51D-201ENST00000335858 1353 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
LIMK2P53671 WDR45-206ENST00000376368 1381 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
LIMK2P53671 PRKCSH-217ENST00000592741 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC16.93■□□□□ 0.3
LIMK2P53671 CCNI2-204ENST00000614847 2642 ntAPPRIS ALT2 TSL 1 (best) BASIC16.93■□□□□ 0.3
LIMK2P53671 PELI3-209ENST00000618547 2508 ntTSL 2 BASIC16.93■□□□□ 0.3
LIMK2P53671 F3-201ENST00000334047 2287 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
LIMK2P53671 DLG4-201ENST00000302955 3184 ntAPPRIS P3 TSL 5 BASIC16.93■□□□□ 0.3
LIMK2P53671 MIF4GD-204ENST00000577542 1531 ntTSL 3 BASIC16.93■□□□□ 0.3
LIMK2P53671 CXXC1-201ENST00000285106 2936 ntAPPRIS P3 TSL 1 (best) BASIC16.93■□□□□ 0.3
LIMK2P53671 BHLHE41-201ENST00000242728 3837 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
LIMK2P53671 ROMO1-201ENST00000336695 496 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
LIMK2P53671 VSTM1-201ENST00000338372 1023 ntAPPRIS P3 TSL 1 (best) BASIC16.93■□□□□ 0.3
LIMK2P53671 DPM3-203ENST00000368400 409 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
LIMK2P53671 AL355310.2-201ENST00000369843 688 ntTSL 3 BASIC16.93■□□□□ 0.3
LIMK2P53671 AL031587.1-201ENST00000410099 1055 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
LIMK2P53671 KRT18P27-201ENST00000427733 1299 ntBASIC16.93■□□□□ 0.3
LIMK2P53671 KRT18P3-201ENST00000451602 1288 ntBASIC16.93■□□□□ 0.3
LIMK2P53671 SMIM27-204ENST00000453396 1003 ntAPPRIS ALT2 TSL 3 BASIC16.93■□□□□ 0.3
LIMK2P53671 HOXB-AS4-202ENST00000480386 566 ntTSL 4 BASIC16.93■□□□□ 0.3
LIMK2P53671 KNCN-203ENST00000481882 1037 ntAPPRIS ALT2 TSL 5 BASIC16.93■□□□□ 0.3
LIMK2P53671 KRT73-AS1-202ENST00000551089 563 ntTSL 4 BASIC16.93■□□□□ 0.3
LIMK2P53671 TMEM220-203ENST00000578345 559 ntAPPRIS ALT2 TSL 2 BASIC16.93■□□□□ 0.3
LIMK2P53671 SDCCAG3P1-201ENST00000589292 1150 ntBASIC16.93■□□□□ 0.3
LIMK2P53671 TEX264-216ENST00000614067 1174 ntAPPRIS ALT2 TSL 3 BASIC16.93■□□□□ 0.3
LIMK2P53671 MIR1199-201ENST00000621445 119 ntBASIC16.93■□□□□ 0.3
LIMK2P53671 PGM5P2-202ENST00000637225 1043 ntBASIC16.93■□□□□ 0.3
LIMK2P53671 FOXP1-218ENST00000498215 2400 ntAPPRIS P3 TSL 2 BASIC16.93■□□□□ 0.3
LIMK2P53671 KRT8P49-201ENST00000604166 1432 ntBASIC16.93■□□□□ 0.3
LIMK2P53671 GLOD4-203ENST00000536578 2497 ntTSL 5 BASIC16.93■□□□□ 0.3
LIMK2P53671 NAP1L4-222ENST00000620138 2479 ntTSL 2 BASIC16.93■□□□□ 0.3
LIMK2P53671 IQSEC2-202ENST00000396435 6015 ntAPPRIS ALT2 TSL 1 (best) BASIC16.93■□□□□ 0.3
LIMK2P53671 RRM2-202ENST00000360566 3673 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
LIMK2P53671 ZNF805-201ENST00000354309 2396 ntTSL 5 BASIC16.93■□□□□ 0.3
LIMK2P53671 MIER1-205ENST00000371014 1728 ntTSL 2 BASIC16.93■□□□□ 0.3
LIMK2P53671 ADGRB2-212ENST00000527361 4919 ntAPPRIS ALT2 TSL 1 (best) BASIC16.93■□□□□ 0.3
LIMK2P53671 SLC25A45-202ENST00000398802 2286 ntAPPRIS P1 TSL 5 BASIC16.93■□□□□ 0.3
LIMK2P53671 FAM57B-201ENST00000279389 1481 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
LIMK2P53671 ZNF57-201ENST00000306908 2003 ntAPPRIS P2 TSL 1 (best) BASIC16.92■□□□□ 0.3
LIMK2P53671 EED-202ENST00000327320 2033 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
LIMK2P53671 BCAT2-202ENST00000402551 2041 ntTSL 2 BASIC16.92■□□□□ 0.3
LIMK2P53671 LINC02370-201ENST00000428272 2009 ntTSL 5 BASIC16.92■□□□□ 0.3
LIMK2P53671 ZNF57-205ENST00000614108 2002 ntAPPRIS ALT2 TSL 5 BASIC16.92■□□□□ 0.3
LIMK2P53671 C2CD4C-201ENST00000332235 3129 ntAPPRIS P1 TSL 2 BASIC16.92■□□□□ 0.3
LIMK2P53671 IPMK-201ENST00000373935 6133 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
LIMK2P53671 FAM129B-201ENST00000373312 3957 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
LIMK2P53671 RGS11-203ENST00000359740 1371 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
LIMK2P53671 NBL1-211ENST00000618761 2051 ntAPPRIS P3 TSL 1 (best) BASIC16.92■□□□□ 0.3
LIMK2P53671 TVP23C-201ENST00000225576 1527 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
LIMK2P53671 PANX2-201ENST00000159647 2964 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
Retrieved 100 of 98,524 protein–RNA pairs in 45.1 ms