Protein–RNA interactions for Protein: P52655

GTF2A1, Transcription initiation factor IIA subunit 1, humanhuman

Predicted RBP Predictions only

Length 376 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GTF2A1P52655 CALHM2-202ENST00000369788 1843 ntAPPRIS P1 TSL 2 BASIC16.52■□□□□ 0.24
GTF2A1P52655 PPP6R1-201ENST00000412770 3961 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
GTF2A1P52655 ESPN-202ENST00000416731 1338 ntTSL 5 BASIC16.52■□□□□ 0.24
GTF2A1P52655 COL4A1-204ENST00000543140 2547 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
GTF2A1P52655 E2F6-202ENST00000381525 3218 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
GTF2A1P52655 SNPH-203ENST00000614659 5354 ntAPPRIS ALT2 TSL 1 (best) BASIC16.52■□□□□ 0.24
GTF2A1P52655 TBC1D24-207ENST00000627285 4382 ntAPPRIS P3 TSL 5 BASIC16.52■□□□□ 0.24
GTF2A1P52655 SYN2-205ENST00000620175 3871 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
GTF2A1P52655 PIK3R5-216ENST00000584803 2653 ntAPPRIS ALT1 TSL 5 BASIC16.52■□□□□ 0.24
GTF2A1P52655 TRNT1-207ENST00000420393 854 ntTSL 3 BASIC16.52■□□□□ 0.24
GTF2A1P52655 SPAG16-207ENST00000432529 1250 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
GTF2A1P52655 AC005056.1-201ENST00000435932 532 ntTSL 4 BASIC16.52■□□□□ 0.24
GTF2A1P52655 AC006970.2-201ENST00000450065 779 ntBASIC16.52■□□□□ 0.24
GTF2A1P52655 MCRIP1-201ENST00000455127 1209 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
GTF2A1P52655 VPS53-216ENST00000574029 585 ntTSL 4 BASIC16.52■□□□□ 0.24
GTF2A1P52655 MIR4758-201ENST00000577688 71 ntBASIC16.52■□□□□ 0.24
GTF2A1P52655 EML2-AS1-202ENST00000591087 838 ntTSL 3 BASIC16.52■□□□□ 0.24
GTF2A1P52655 ZNF667-AS1-206ENST00000591797 535 ntTSL 5 BASIC16.52■□□□□ 0.24
GTF2A1P52655 SDR42E2-201ENST00000602312 2630 ntAPPRIS P1 TSL 5 BASIC16.52■□□□□ 0.23
GTF2A1P52655 TMEM25-203ENST00000354284 1456 ntTSL 2 BASIC16.52■□□□□ 0.23
GTF2A1P52655 FGD5-206ENST00000543601 5768 ntTSL 1 (best) BASIC16.52■□□□□ 0.23
GTF2A1P52655 APP-205ENST00000358918 2366 ntTSL 5 BASIC16.52■□□□□ 0.23
GTF2A1P52655 MYC-202ENST00000377970 2351 ntAPPRIS ALT2 TSL 1 (best) BASIC16.52■□□□□ 0.23
GTF2A1P52655 POLM-203ENST00000395831 2380 ntTSL 1 (best) BASIC16.52■□□□□ 0.23
GTF2A1P52655 FBXO45-202ENST00000440469 3689 ntTSL 2 BASIC16.52■□□□□ 0.23
GTF2A1P52655 TMBIM4-202ENST00000358230 2952 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
GTF2A1P52655 GGT1-202ENST00000400380 2540 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
GTF2A1P52655 UNC5B-202ENST00000373192 6451 ntTSL 1 (best) BASIC16.52■□□□□ 0.23
GTF2A1P52655 ANXA2-201ENST00000332680 1444 ntTSL 1 (best) BASIC16.52■□□□□ 0.23
GTF2A1P52655 TWF2-203ENST00000499914 1440 ntTSL 5 BASIC16.52■□□□□ 0.23
GTF2A1P52655 KRT8P9-201ENST00000558927 1449 ntBASIC16.52■□□□□ 0.23
GTF2A1P52655 FAM114A2-215ENST00000522858 3379 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
GTF2A1P52655 YTHDF2-201ENST00000373812 2925 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
GTF2A1P52655 PTPRO-202ENST00000348962 5061 ntTSL 1 (best) BASIC16.52■□□□□ 0.23
GTF2A1P52655 SESN1-202ENST00000356644 2676 ntTSL 1 (best) BASIC16.52■□□□□ 0.23
GTF2A1P52655 PLEKHG3-202ENST00000394691 4397 ntTSL 5 BASIC16.52■□□□□ 0.23
GTF2A1P52655 RNF182-208ENST00000544682 3495 ntAPPRIS P1 TSL 4 BASIC16.51■□□□□ 0.23
GTF2A1P52655 ZBTB20-215ENST00000481632 2800 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
GTF2A1P52655 LRRC17-202ENST00000339431 1963 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
GTF2A1P52655 POLR3D-202ENST00000397802 5494 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
GTF2A1P52655 TLE4-204ENST00000376537 2793 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
GTF2A1P52655 HELZ2-204ENST00000467148 8064 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
GTF2A1P52655 NFIC-203ENST00000443272 1716 ntAPPRIS P1 TSL 2 BASIC16.51■□□□□ 0.23
GTF2A1P52655 ITGB4-206ENST00000579662 5554 ntAPPRIS ALT2 TSL 1 (best) BASIC16.51■□□□□ 0.23
GTF2A1P52655 USP17L2-201ENST00000333796 1910 ntAPPRIS P1 BASIC16.51■□□□□ 0.23
GTF2A1P52655 LCK-206ENST00000373564 2137 ntTSL 5 BASIC16.51■□□□□ 0.23
GTF2A1P52655 FECH-202ENST00000382873 2526 ntAPPRIS ALT2 TSL 2 BASIC16.51■□□□□ 0.23
GTF2A1P52655 ARFGAP2-202ENST00000426335 2937 ntTSL 2 BASIC16.51■□□□□ 0.23
GTF2A1P52655 RPS6KA4-202ENST00000528057 3121 ntAPPRIS ALT1 TSL 1 (best) BASIC16.51■□□□□ 0.23
GTF2A1P52655 NATD1-201ENST00000611551 4931 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
GTF2A1P52655 NFIC-206ENST00000589123 8068 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
GTF2A1P52655 DENND4C-209ENST00000602925 6831 ntAPPRIS P1 TSL 5 BASIC16.51■□□□□ 0.23
GTF2A1P52655 DNAJC22-202ENST00000549441 4412 ntAPPRIS P1 TSL 2 BASIC16.51■□□□□ 0.23
GTF2A1P52655 MRAP-201ENST00000303645 935 ntAPPRIS P4 TSL 1 (best) BASIC16.51■□□□□ 0.23
GTF2A1P52655 AC026427.1-201ENST00000508993 555 ntTSL 3 BASIC16.51■□□□□ 0.23
GTF2A1P52655 C1QL1P1-201ENST00000568105 661 ntBASIC16.51■□□□□ 0.23
GTF2A1P52655 POLRMT-202ENST00000588649 3835 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
GTF2A1P52655 AC083880.1-201ENST00000608266 535 ntBASIC16.51■□□□□ 0.23
GTF2A1P52655 MMP25-204ENST00000612971 1017 ntTSL 5 BASIC16.51■□□□□ 0.23
GTF2A1P52655 FADS2-202ENST00000278840 3630 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
GTF2A1P52655 TCP11L2-201ENST00000299045 2219 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
GTF2A1P52655 UBQLN1-202ENST00000376395 4118 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
GTF2A1P52655 ZNF655-202ENST00000320583 1601 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
GTF2A1P52655 IRF2BP2-201ENST00000366609 4663 ntAPPRIS P3 TSL 1 (best) BASIC16.51■□□□□ 0.23
GTF2A1P52655 CCDC83-201ENST00000280245 2358 ntAPPRIS P3 TSL 2 BASIC16.51■□□□□ 0.23
GTF2A1P52655 LINC02028-204ENST00000449350 1419 ntTSL 3 BASIC16.51■□□□□ 0.23
GTF2A1P52655 PRKD2-216ENST00000601806 2906 ntAPPRIS ALT2 TSL 5 BASIC16.51■□□□□ 0.23
GTF2A1P52655 SCYL1-205ENST00000524944 2715 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
GTF2A1P52655 SRSF8-201ENST00000587424 4028 ntAPPRIS P1 BASIC16.51■□□□□ 0.23
GTF2A1P52655 INTS11-203ENST00000419704 1798 ntTSL 2 BASIC16.51■□□□□ 0.23
GTF2A1P52655 TNFSF13-205ENST00000396545 1593 ntAPPRIS ALT1 TSL 1 (best) BASIC16.51■□□□□ 0.23
GTF2A1P52655 SBSN-201ENST00000452271 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC16.51■□□□□ 0.23
GTF2A1P52655 CERK-201ENST00000216264 4450 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
GTF2A1P52655 FAM192A-201ENST00000309137 2848 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
GTF2A1P52655 LINC00476-204ENST00000429781 2825 ntTSL 2 BASIC16.51■□□□□ 0.23
GTF2A1P52655 ARIH2-205ENST00000449376 2278 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
GTF2A1P52655 GPR20-201ENST00000377741 1515 ntAPPRIS P1 TSL 3 BASIC16.5■□□□□ 0.23
GTF2A1P52655 KCNT1-208ENST00000488444 3696 ntAPPRIS ALT2 TSL 5 BASIC16.5■□□□□ 0.23
GTF2A1P52655 ACER2-201ENST00000340967 2238 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
GTF2A1P52655 DNM1-201ENST00000341179 3254 ntAPPRIS ALT1 TSL 1 (best) BASIC16.5■□□□□ 0.23
GTF2A1P52655 PTPRC-206ENST00000413409 1338 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
GTF2A1P52655 GORASP1-220ENST00000479927 1345 ntTSL 2 BASIC16.5■□□□□ 0.23
GTF2A1P52655 ARRB2-216ENST00000574954 1348 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
GTF2A1P52655 RLF-201ENST00000372771 6246 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
GTF2A1P52655 LRRFIP2-205ENST00000421276 2522 ntTSL 2 BASIC16.5■□□□□ 0.23
GTF2A1P52655 RALGPS2-204ENST00000367635 5834 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
GTF2A1P52655 AL357033.4-201ENST00000617703 1807 ntBASIC16.5■□□□□ 0.23
GTF2A1P52655 AC046185.3-201ENST00000623228 1824 ntBASIC16.5■□□□□ 0.23
GTF2A1P52655 TMEM53-205ENST00000372244 1472 ntTSL 2 BASIC16.5■□□□□ 0.23
GTF2A1P52655 CAMK2D-205ENST00000394524 5294 ntAPPRIS ALT1 TSL 2 BASIC16.5■□□□□ 0.23
GTF2A1P52655 CCDC22-201ENST00000376227 2319 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
GTF2A1P52655 DUS2-207ENST00000565263 2310 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
GTF2A1P52655 CTSD-213ENST00000637915 1982 ntAPPRIS ALT2 TSL 5 BASIC16.5■□□□□ 0.23
GTF2A1P52655 C17orf107-201ENST00000381365 3199 ntAPPRIS P2 TSL 2 BASIC16.5■□□□□ 0.23
GTF2A1P52655 DIS3-202ENST00000377780 5232 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
GTF2A1P52655 CAPN5-202ENST00000456580 2805 ntTSL 2 BASIC16.5■□□□□ 0.23
GTF2A1P52655 ZNF580-201ENST00000325333 1261 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
GTF2A1P52655 XXYLT1-202ENST00000356740 564 ntTSL 2 BASIC16.5■□□□□ 0.23
GTF2A1P52655 PFN3-201ENST00000358571 530 ntAPPRIS P1 BASIC16.5■□□□□ 0.23
GTF2A1P52655 IFI6-203ENST00000362020 828 ntAPPRIS ALT2 TSL 1 (best) BASIC16.5■□□□□ 0.23
Retrieved 100 of 98,524 protein–RNA pairs in 34 ms