Protein–RNA interactions for Protein: P50876

RNF144A, E3 ubiquitin-protein ligase RNF144A, humanhuman

Predicted RBP Predictions only

Length 292 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF144AP50876 MYH14-210ENST00000601313 6896 ntAPPRIS ALT2 TSL 1 (best) BASIC15.66■□□□□ 0.1
RNF144AP50876 UCHL5-206ENST00000367455 5327 ntAPPRIS P3 TSL 1 (best) BASIC15.66■□□□□ 0.1
RNF144AP50876 PITHD1-201ENST00000246151 1603 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
RNF144AP50876 ZNF281-203ENST00000367353 3080 ntAPPRIS P3 TSL 1 (best) BASIC15.66■□□□□ 0.1
RNF144AP50876 KPNA2-202ENST00000537025 2456 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
RNF144AP50876 EEFSEC-202ENST00000483457 1859 ntTSL 5 BASIC15.66■□□□□ 0.1
RNF144AP50876 NANS-201ENST00000210444 1170 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
RNF144AP50876 GOSR2-201ENST00000225567 1245 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
RNF144AP50876 SMIM29-201ENST00000335352 1160 ntTSL 2 BASIC15.66■□□□□ 0.1
RNF144AP50876 MRPL3P1-201ENST00000400109 1033 ntBASIC15.66■□□□□ 0.1
RNF144AP50876 MYCNOS-201ENST00000419083 770 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
RNF144AP50876 ODF3B-205ENST00000428989 762 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
RNF144AP50876 MPIG6B-210ENST00000480039 790 ntAPPRIS ALT2 TSL 1 (best) BASIC15.66■□□□□ 0.1
RNF144AP50876 EEF1D-238ENST00000531621 840 ntTSL 3 BASIC15.66■□□□□ 0.1
RNF144AP50876 ATP5G2-204ENST00000549164 745 ntAPPRIS P1 TSL 3 BASIC15.66■□□□□ 0.1
RNF144AP50876 AC116612.1-201ENST00000557144 562 ntTSL 3 BASIC15.66■□□□□ 0.1
RNF144AP50876 DUX4L17-201ENST00000557360 1267 ntBASIC15.66■□□□□ 0.1
RNF144AP50876 AC107982.2-201ENST00000577360 463 ntTSL 5 BASIC15.66■□□□□ 0.1
RNF144AP50876 ATP5G2-209ENST00000602871 668 ntAPPRIS P1 TSL 2 BASIC15.66■□□□□ 0.1
RNF144AP50876 ANO2-212ENST00000612575 1087 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
RNF144AP50876 SMIM20-205ENST00000614775 1190 ntTSL 5 BASIC15.66■□□□□ 0.1
RNF144AP50876 SBDS-205ENST00000617799 953 ntAPPRIS ALT1 TSL 5 BASIC15.66■□□□□ 0.1
RNF144AP50876 ATP6AP2-220ENST00000636970 1187 ntAPPRIS ALT2 TSL 5 BASIC15.66■□□□□ 0.1
RNF144AP50876 AC107918.4-202ENST00000641623 219 ntBASIC15.66■□□□□ 0.1
RNF144AP50876 LITAF-202ENST00000381810 1527 ntTSL 5 BASIC15.66■□□□□ 0.1
RNF144AP50876 HTD2-201ENST00000461393 1508 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
RNF144AP50876 SLC35F3-202ENST00000366618 2891 ntAPPRIS P3 TSL 2 BASIC15.66■□□□□ 0.1
RNF144AP50876 SLC29A2-202ENST00000357440 2514 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
RNF144AP50876 ARFIP2-203ENST00000423813 1430 ntTSL 2 BASIC15.66■□□□□ 0.1
RNF144AP50876 ACIN1-205ENST00000457657 4815 ntAPPRIS ALT2 TSL 5 BASIC15.66■□□□□ 0.1
RNF144AP50876 AC107871.1-202ENST00000562767 3389 ntAPPRIS P1 TSL 3 BASIC15.66■□□□□ 0.1
RNF144AP50876 PRODH-202ENST00000334029 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC15.66■□□□□ 0.1
RNF144AP50876 VPS37C-201ENST00000301765 2865 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
RNF144AP50876 PIGT-257ENST00000640210 1715 ntTSL 5 BASIC15.65■□□□□ 0.1
RNF144AP50876 CCNI2-204ENST00000614847 2642 ntAPPRIS ALT2 TSL 1 (best) BASIC15.65■□□□□ 0.1
RNF144AP50876 RELT-201ENST00000064780 3535 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
RNF144AP50876 INHA-201ENST00000243786 1468 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
RNF144AP50876 CLIC5-202ENST00000339561 2390 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
RNF144AP50876 ZNF346-202ENST00000503039 2774 ntTSL 2 BASIC15.65■□□□□ 0.1
RNF144AP50876 GYG1-201ENST00000296048 1890 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
RNF144AP50876 ARHGAP35-201ENST00000404338 8889 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
RNF144AP50876 BSG-203ENST00000353555 1616 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
RNF144AP50876 COL18A1-203ENST00000359759 6586 ntAPPRIS ALT2 TSL 5 BASIC15.65■□□□□ 0.1
RNF144AP50876 AC092364.2-201ENST00000596710 2692 ntBASIC15.65■□□□□ 0.1
RNF144AP50876 SYNDIG1L-202ENST00000554823 2420 ntAPPRIS P1 TSL 3 BASIC15.65■□□□□ 0.1
RNF144AP50876 INA-201ENST00000369849 3231 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
RNF144AP50876 JMJD4-206ENST00000615711 2591 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
RNF144AP50876 AC046158.3-201ENST00000624947 2558 ntBASIC15.65■□□□□ 0.1
RNF144AP50876 TCOF1-206ENST00000445265 4825 ntAPPRIS ALT2 TSL 5 BASIC15.65■□□□□ 0.1
RNF144AP50876 GDE1-201ENST00000353258 2958 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
RNF144AP50876 RBFOX1-207ENST00000547338 1513 ntTSL 2 BASIC15.65■□□□□ 0.1
RNF144AP50876 SLC4A5-203ENST00000377632 3123 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
RNF144AP50876 LTF-203ENST00000426532 2494 ntTSL 2 BASIC15.65■□□□□ 0.1
RNF144AP50876 DOLK-201ENST00000372586 2090 ntAPPRIS P1 BASIC15.65■□□□□ 0.1
RNF144AP50876 PPIB-201ENST00000300026 1081 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
RNF144AP50876 DBI-201ENST00000311521 714 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
RNF144AP50876 SPATA22-202ENST00000355380 1216 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
RNF144AP50876 IGF2-206ENST00000418738 934 ntAPPRIS P2 TSL 1 (best) BASIC15.65■□□□□ 0.1
RNF144AP50876 EMC9-202ENST00000419198 953 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
RNF144AP50876 MAGI2-AS3-208ENST00000446159 670 ntTSL 3 BASIC15.65■□□□□ 0.1
RNF144AP50876 ITGB1BP1-205ENST00000456913 1043 ntTSL 2 BASIC15.65■□□□□ 0.1
RNF144AP50876 AL133343.2-201ENST00000457213 370 ntTSL 3 BASIC15.65■□□□□ 0.1
RNF144AP50876 AC009078.2-202ENST00000463353 338 ntBASIC15.65■□□□□ 0.1
RNF144AP50876 ITGB1BP1-216ENST00000488451 874 ntTSL 3 BASIC15.65■□□□□ 0.1
RNF144AP50876 AC067930.3-201ENST00000524808 701 ntTSL 3 BASIC15.65■□□□□ 0.1
RNF144AP50876 ARAP1-AS1-201ENST00000542022 388 ntTSL 5 BASIC15.65■□□□□ 0.1
RNF144AP50876 BLOC1S6-202ENST00000562384 494 ntTSL 4 BASIC15.65■□□□□ 0.1
RNF144AP50876 AC068594.1-202ENST00000581657 749 ntTSL 3 BASIC15.65■□□□□ 0.1
RNF144AP50876 AC002091.2-201ENST00000585297 402 ntTSL 2 BASIC15.65■□□□□ 0.1
RNF144AP50876 SYT6-201ENST00000369547 4369 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
RNF144AP50876 ABCF3-203ENST00000429586 2624 ntAPPRIS P2 TSL 1 (best) BASIC15.65■□□□□ 0.1
RNF144AP50876 NSFL1C-201ENST00000216879 3568 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
RNF144AP50876 RCAN3-202ENST00000374395 6802 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
RNF144AP50876 ACTRT2-201ENST00000378404 1421 ntAPPRIS P1 BASIC15.65■□□□□ 0.1
RNF144AP50876 CORO6-202ENST00000388767 2397 ntAPPRIS P2 TSL 2 BASIC15.65■□□□□ 0.1
RNF144AP50876 RDH13-202ENST00000396247 1987 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
RNF144AP50876 ETV3L-201ENST00000454449 1976 ntAPPRIS P1 TSL 2 BASIC15.65■□□□□ 0.1
RNF144AP50876 GAS7-213ENST00000580865 2417 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
RNF144AP50876 ARHGEF4-205ENST00000409359 5489 ntTSL 5 BASIC15.65■□□□□ 0.1
RNF144AP50876 BCAN-202ENST00000361588 2563 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
RNF144AP50876 REPS1-208ENST00000450536 4537 ntAPPRIS ALT1 TSL 1 (best) BASIC15.65■□□□□ 0.1
RNF144AP50876 ANKRD23-203ENST00000418232 2156 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
RNF144AP50876 LMBR1-202ENST00000359422 4727 ntTSL 5 BASIC15.65■□□□□ 0.1
RNF144AP50876 ELF2-204ENST00000394235 4012 ntAPPRIS P1 TSL 5 BASIC15.65■□□□□ 0.1
RNF144AP50876 CA9-201ENST00000378357 1618 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
RNF144AP50876 PDE4C-201ENST00000262805 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC15.65■□□□□ 0.1
RNF144AP50876 SHISA6-204ENST00000441885 7575 ntAPPRIS P3 TSL 5 BASIC15.65■□□□□ 0.1
RNF144AP50876 PPP1R3G-201ENST00000405617 4907 ntAPPRIS P1 BASIC15.64■□□□□ 0.09
RNF144AP50876 EVPLL-201ENST00000399134 2095 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
RNF144AP50876 SH2B3-202ENST00000538307 2062 ntTSL 2 BASIC15.64■□□□□ 0.09
RNF144AP50876 FLVCR1-AS1-201ENST00000356684 2525 ntTSL 2 BASIC15.64■□□□□ 0.09
RNF144AP50876 DOC2GP-204ENST00000639052 2548 ntBASIC15.64■□□□□ 0.09
RNF144AP50876 MICA-209ENST00000449934 1386 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
RNF144AP50876 ZDHHC24-201ENST00000310442 4721 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
RNF144AP50876 PUF60-201ENST00000313352 1804 ntAPPRIS ALT1 TSL 1 (best) BASIC15.64■□□□□ 0.09
RNF144AP50876 STEAP3-204ENST00000409811 2103 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
RNF144AP50876 ASAH1-231ENST00000636577 2129 ntTSL 5 BASIC15.64■□□□□ 0.09
RNF144AP50876 FHL1-207ENST00000394155 2706 ntTSL 5 BASIC15.64■□□□□ 0.09
RNF144AP50876 TNFRSF13C-201ENST00000291232 3944 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
RNF144AP50876 NDUFB9-201ENST00000276689 711 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Retrieved 100 of 98,524 protein–RNA pairs in 41.1 ms