Protein–RNA interactions for Protein: P50416

CPT1A, Carnitine O-palmitoyltransferase 1, liver isoform, humanhuman

Predictions only

Length 773 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CPT1AP50416 PAX5-207ENST00000446742 885 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
CPT1AP50416 SPTLC1P1-201ENST00000447199 261 ntBASIC18.47■□□□□ 0.55
CPT1AP50416 AL606760.1-201ENST00000458151 1181 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
CPT1AP50416 FAM86HP-203ENST00000511564 521 ntTSL 2 BASIC18.47■□□□□ 0.55
CPT1AP50416 RNA5SP410-201ENST00000516285 106 ntBASIC18.47■□□□□ 0.55
CPT1AP50416 RIC8B-209ENST00000549643 571 ntTSL 4 BASIC18.47■□□□□ 0.55
CPT1AP50416 MAX-210ENST00000555419 765 ntTSL 5 BASIC18.47■□□□□ 0.55
CPT1AP50416 PFN1-203ENST00000574872 1173 ntTSL 2 BASIC18.47■□□□□ 0.55
CPT1AP50416 AURKB-214ENST00000585124 1227 ntAPPRIS P3 TSL 1 (best) BASIC18.47■□□□□ 0.55
CPT1AP50416 AC010619.1-201ENST00000599536 675 ntAPPRIS P1 TSL 5 BASIC18.47■□□□□ 0.55
CPT1AP50416 RN7SL828P-201ENST00000607615 303 ntBASIC18.47■□□□□ 0.55
CPT1AP50416 LAT-203ENST00000395456 1616 ntAPPRIS ALT2 TSL 1 (best) BASIC18.47■□□□□ 0.55
CPT1AP50416 AC100830.1-201ENST00000560387 1609 ntTSL 2 BASIC18.47■□□□□ 0.55
CPT1AP50416 SLC27A5-207ENST00000601355 1987 ntAPPRIS ALT2 TSL 2 BASIC18.47■□□□□ 0.55
CPT1AP50416 PCDHGC3-205ENST00000617641 2346 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
CPT1AP50416 ARHGAP22-206ENST00000435790 2595 ntAPPRIS ALT2 TSL 2 BASIC18.47■□□□□ 0.55
CPT1AP50416 MBOAT1-201ENST00000324607 1794 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
CPT1AP50416 AGAP6-201ENST00000374056 2703 ntAPPRIS ALT2 TSL 1 (best) BASIC18.47■□□□□ 0.55
CPT1AP50416 KRT8P39-201ENST00000396270 1433 ntBASIC18.47■□□□□ 0.55
CPT1AP50416 ACY3-201ENST00000255082 1300 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
CPT1AP50416 KANK3-201ENST00000330915 2787 ntAPPRIS P2 TSL 1 (best) BASIC18.47■□□□□ 0.55
CPT1AP50416 CFC1B-202ENST00000619050 1554 ntTSL 5 BASIC18.47■□□□□ 0.55
CPT1AP50416 SNX17-210ENST00000537606 2400 ntTSL 2 BASIC18.47■□□□□ 0.55
CPT1AP50416 ADAP2-201ENST00000330889 2934 ntAPPRIS P2 TSL 1 (best) BASIC18.46■□□□□ 0.55
CPT1AP50416 ILVBL-209ENST00000534378 2067 ntTSL 5 BASIC18.46■□□□□ 0.55
CPT1AP50416 SMOX-205ENST00000379460 2230 ntAPPRIS P1 TSL 2 BASIC18.46■□□□□ 0.55
CPT1AP50416 TRPM2-202ENST00000300482 5989 ntAPPRIS P3 TSL 1 (best) BASIC18.46■□□□□ 0.55
CPT1AP50416 AGXT-201ENST00000307503 1865 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
CPT1AP50416 FAHD2B-202ENST00000414820 1388 ntAPPRIS P1 TSL 5 BASIC18.46■□□□□ 0.55
CPT1AP50416 IL11RA-215ENST00000602473 1388 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
CPT1AP50416 SUPT20H-202ENST00000356185 2681 ntAPPRIS P3 TSL 1 (best) BASIC18.46■□□□□ 0.55
CPT1AP50416 IFFO1-204ENST00000396840 2677 ntAPPRIS ALT1 TSL 5 BASIC18.46■□□□□ 0.55
CPT1AP50416 AIP-201ENST00000279146 1221 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
CPT1AP50416 PAGE5-201ENST00000289619 741 ntAPPRIS P3 TSL 1 (best) BASIC18.46■□□□□ 0.55
CPT1AP50416 RETN-202ENST00000381324 249 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
CPT1AP50416 NDUFA3-204ENST00000391764 267 ntTSL 3 BASIC18.46■□□□□ 0.55
CPT1AP50416 RPUSD3-204ENST00000424438 1005 ntTSL 2 BASIC18.46■□□□□ 0.55
CPT1AP50416 GNG4-205ENST00000484517 684 ntAPPRIS P1 TSL 2 BASIC18.46■□□□□ 0.55
CPT1AP50416 SPSB2-204ENST00000523102 1205 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
CPT1AP50416 SPSB2-205ENST00000524270 1236 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
CPT1AP50416 AC137894.1-201ENST00000526431 547 ntTSL 2 BASIC18.46■□□□□ 0.55
CPT1AP50416 SPATA8-AS1-201ENST00000558722 465 ntTSL 3 BASIC18.46■□□□□ 0.55
CPT1AP50416 AC012615.6-204ENST00000587741 477 ntTSL 3 BASIC18.46■□□□□ 0.55
CPT1AP50416 DENND2A-201ENST00000275884 3735 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
CPT1AP50416 OR6D1P-202ENST00000641007 5290 ntBASIC18.46■□□□□ 0.55
CPT1AP50416 IL6R-202ENST00000368485 5914 ntAPPRIS P4 TSL 1 (best) BASIC18.46■□□□□ 0.55
CPT1AP50416 BCL2L12-202ENST00000246785 1431 ntAPPRIS P3 TSL 1 (best) BASIC18.46■□□□□ 0.55
CPT1AP50416 PLTP-204ENST00000420868 1420 ntTSL 2 BASIC18.46■□□□□ 0.55
CPT1AP50416 IRF1-202ENST00000405885 2061 ntAPPRIS P1 TSL 5 BASIC18.46■□□□□ 0.55
CPT1AP50416 HACE1-202ENST00000369125 3102 ntTSL 2 BASIC18.46■□□□□ 0.55
CPT1AP50416 GJA3-201ENST00000241125 5211 ntAPPRIS P1 TSL 3 BASIC18.46■□□□□ 0.55
CPT1AP50416 RNF217-211ENST00000560949 5145 ntAPPRIS ALT2 TSL 5 BASIC18.46■□□□□ 0.55
CPT1AP50416 GPSM2-201ENST00000264126 3032 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
CPT1AP50416 CLN8-205ENST00000520991 1305 ntTSL 5 BASIC18.46■□□□□ 0.55
CPT1AP50416 AL132857.2-201ENST00000634305 1737 ntTSL 5 BASIC18.46■□□□□ 0.55
CPT1AP50416 IFFO1-202ENST00000356896 2680 ntTSL 5 BASIC18.46■□□□□ 0.54
CPT1AP50416 AP2A2-222ENST00000534328 1491 ntTSL 5 BASIC18.46■□□□□ 0.54
CPT1AP50416 AZIN1-201ENST00000337198 4721 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
CPT1AP50416 ESR2-206ENST00000553796 1634 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
CPT1AP50416 PPM1H-201ENST00000228705 6353 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
CPT1AP50416 SCNN1A-205ENST00000396966 2336 ntTSL 3 BASIC18.45■□□□□ 0.54
CPT1AP50416 IL17RC-206ENST00000416074 2342 ntAPPRIS ALT2 TSL 1 (best) BASIC18.45■□□□□ 0.54
CPT1AP50416 ZNF12-204ENST00000405858 5051 ntAPPRIS P4 TSL 1 (best) BASIC18.45■□□□□ 0.54
CPT1AP50416 CD1B-201ENST00000368168 1395 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
CPT1AP50416 PGC-202ENST00000373025 1371 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
CPT1AP50416 CCDC177-201ENST00000599174 4131 ntAPPRIS P1 TSL 3 BASIC18.45■□□□□ 0.54
CPT1AP50416 HSF2-202ENST00000452194 2643 ntAPPRIS ALT2 TSL 1 (best) BASIC18.45■□□□□ 0.54
CPT1AP50416 TNFAIP2-201ENST00000333007 4175 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
CPT1AP50416 ZSCAN25-201ENST00000262941 1652 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
CPT1AP50416 DOK4-218ENST00000569548 1848 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
CPT1AP50416 AC073349.1-201ENST00000340779 1062 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
CPT1AP50416 PKIG-202ENST00000372886 1180 ntAPPRIS P1 TSL 2 BASIC18.45■□□□□ 0.54
CPT1AP50416 EFHD1-202ENST00000409613 1156 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
CPT1AP50416 MSC-AS1-206ENST00000519751 596 ntTSL 4 BASIC18.45■□□□□ 0.54
CPT1AP50416 EEF1D-207ENST00000524624 1084 ntAPPRIS ALT2 TSL 5 BASIC18.45■□□□□ 0.54
CPT1AP50416 AC009133.1-203ENST00000569039 589 ntTSL 2 BASIC18.45■□□□□ 0.54
CPT1AP50416 AC026471.2-201ENST00000569782 655 ntTSL 2 BASIC18.45■□□□□ 0.54
CPT1AP50416 NDUFAB1-205ENST00000570319 885 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
CPT1AP50416 AC105021.1-202ENST00000570572 669 ntBASIC18.45■□□□□ 0.54
CPT1AP50416 AC026803.2-201ENST00000599784 819 ntTSL 3 BASIC18.45■□□□□ 0.54
CPT1AP50416 LAMTOR5-208ENST00000614544 846 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
CPT1AP50416 SNHG28-203ENST00000621242 708 ntAPPRIS P1 TSL 5 BASIC18.45■□□□□ 0.54
CPT1AP50416 ARHGAP26-201ENST00000274498 6862 ntAPPRIS P3 TSL 1 (best) BASIC18.45■□□□□ 0.54
CPT1AP50416 COL5A3-201ENST00000264828 6174 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
CPT1AP50416 PITPNM2-AS1-201ENST00000506255 2191 ntTSL 2 BASIC18.45■□□□□ 0.54
CPT1AP50416 DNM3-203ENST00000367733 2322 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
CPT1AP50416 PRDM12-201ENST00000253008 2476 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
CPT1AP50416 ITGB5-201ENST00000296181 4372 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
CPT1AP50416 SMUG1-209ENST00000505128 2607 ntTSL 2 BASIC18.45■□□□□ 0.54
CPT1AP50416 B3GNT2-201ENST00000301998 2763 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
CPT1AP50416 ISLR2-210ENST00000565540 2780 ntAPPRIS P1 TSL 4 BASIC18.45■□□□□ 0.54
CPT1AP50416 POFUT2-201ENST00000331343 4825 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
CPT1AP50416 TMEM53-203ENST00000372242 1846 ntTSL 3 BASIC18.44■□□□□ 0.54
CPT1AP50416 PHKG2-201ENST00000328273 1536 ntAPPRIS ALT1 TSL 5 BASIC18.44■□□□□ 0.54
CPT1AP50416 DLC1-203ENST00000358919 4392 ntAPPRIS ALT2 TSL 1 (best) BASIC18.44■□□□□ 0.54
CPT1AP50416 BEND5-201ENST00000371833 1716 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
CPT1AP50416 TXNDC2-204ENST00000536353 1703 ntTSL 5 BASIC18.44■□□□□ 0.54
CPT1AP50416 GGT6-203ENST00000573591 1730 ntTSL 4 BASIC18.44■□□□□ 0.54
CPT1AP50416 ANXA4-202ENST00000409920 1414 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
CPT1AP50416 MORN4-202ENST00000370635 419 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
Retrieved 100 of 98,524 protein–RNA pairs in 56.2 ms