Protein–RNA interactions for Protein: P49759

CLK1, Dual specificity protein kinase CLK1, humanhuman

Known RBP Predictions only

Length 484 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLK1P49759 ROBO3-221ENST00000543966 1520 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
CLK1P49759 PSCA-201ENST00000301258 1020 ntAPPRIS P2 TSL 1 (best) BASIC15.86■□□□□ 0.13
CLK1P49759 RPA2-202ENST00000373909 1162 ntTSL 3 BASIC15.86■□□□□ 0.13
CLK1P49759 AL645608.6-201ENST00000418300 402 ntTSL 3 BASIC15.86■□□□□ 0.13
CLK1P49759 ZNF337-AS1-204ENST00000428254 817 ntTSL 5 BASIC15.86■□□□□ 0.13
CLK1P49759 SRP19-202ENST00000445150 833 ntTSL 2 BASIC15.86■□□□□ 0.13
CLK1P49759 BET1L-206ENST00000486280 665 ntTSL 3 BASIC15.86■□□□□ 0.13
CLK1P49759 AC096582.2-201ENST00000510860 516 ntBASIC15.86■□□□□ 0.13
CLK1P49759 EFCAB11-211ENST00000556609 568 ntTSL 3 BASIC15.86■□□□□ 0.13
CLK1P49759 AC092338.2-202ENST00000567158 611 ntTSL 5 BASIC15.86■□□□□ 0.13
CLK1P49759 AC008735.1-201ENST00000592252 802 ntTSL 5 BASIC15.86■□□□□ 0.13
CLK1P49759 AC099336.1-202ENST00000602961 463 ntBASIC15.86■□□□□ 0.13
CLK1P49759 HNF1B-206ENST00000620125 1103 ntTSL 5 BASIC15.86■□□□□ 0.13
CLK1P49759 PRDM6-201ENST00000407847 9267 ntAPPRIS P1 TSL 5 BASIC15.86■□□□□ 0.13
CLK1P49759 TRIM7-204ENST00000393319 2320 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
CLK1P49759 GCGR-201ENST00000400723 2051 ntAPPRIS P2 TSL 1 (best) BASIC15.86■□□□□ 0.13
CLK1P49759 THAP8-201ENST00000292894 1825 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
CLK1P49759 MIER1-206ENST00000371016 1802 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
CLK1P49759 TRIM7-203ENST00000393315 2851 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
CLK1P49759 EDN3-202ENST00000337938 2636 ntAPPRIS P4 TSL 1 (best) BASIC15.86■□□□□ 0.13
CLK1P49759 TUBGCP2-204ENST00000417178 4029 ntTSL 2 BASIC15.86■□□□□ 0.13
CLK1P49759 NOMO2-203ENST00000543392 3765 ntAPPRIS ALT2 TSL 1 (best) BASIC15.86■□□□□ 0.13
CLK1P49759 AMZ2-203ENST00000392720 1378 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
CLK1P49759 APPL1-201ENST00000288266 6058 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
CLK1P49759 AC016396.2-201ENST00000562575 1417 ntBASIC15.85■□□□□ 0.13
CLK1P49759 HSPH1-201ENST00000320027 5191 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
CLK1P49759 PIK3CD-206ENST00000536656 5483 ntTSL 5 BASIC15.85■□□□□ 0.13
CLK1P49759 PIK3CD-208ENST00000628140 5483 ntTSL 5 BASIC15.85■□□□□ 0.13
CLK1P49759 IBA57-201ENST00000366711 7817 ntAPPRIS P1 TSL 2 BASIC15.85■□□□□ 0.13
CLK1P49759 INA-201ENST00000369849 3231 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
CLK1P49759 TLX2-204ENST00000621092 1452 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
CLK1P49759 RBFOX1-207ENST00000547338 1513 ntTSL 2 BASIC15.85■□□□□ 0.13
CLK1P49759 SLC9A5-201ENST00000299798 3736 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
CLK1P49759 CCNC-209ENST00000520371 2186 ntTSL 5 BASIC15.85■□□□□ 0.13
CLK1P49759 IL18BP-214ENST00000620017 1566 ntTSL 5 BASIC15.85■□□□□ 0.13
CLK1P49759 LINC00612-201ENST00000538094 2213 ntTSL 2 BASIC15.85■□□□□ 0.13
CLK1P49759 CACNG7-201ENST00000222212 1016 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
CLK1P49759 CKLF-202ENST00000345436 571 ntAPPRIS ALT2 TSL 1 (best) BASIC15.85■□□□□ 0.13
CLK1P49759 NEURL2-201ENST00000372518 1278 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
CLK1P49759 CDKN1C-201ENST00000380725 1220 ntAPPRIS ALT2 TSL 2 BASIC15.85■□□□□ 0.13
CLK1P49759 GGT1-207ENST00000404532 853 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
CLK1P49759 TP53TG1-202ENST00000416560 710 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
CLK1P49759 PHGR1-201ENST00000448599 436 ntAPPRIS P1 TSL 5 BASIC15.85■□□□□ 0.13
CLK1P49759 FICD-205ENST00000552758 603 ntTSL 2 BASIC15.85■□□□□ 0.13
CLK1P49759 PNN-202ENST00000553331 656 ntTSL 3 BASIC15.85■□□□□ 0.13
CLK1P49759 ZFPM1-205ENST00000569086 563 ntTSL 2 BASIC15.85■□□□□ 0.13
CLK1P49759 C1QTNF1-205ENST00000578229 1294 ntTSL 4 BASIC15.85■□□□□ 0.13
CLK1P49759 CCDC61-202ENST00000594087 1017 ntAPPRIS ALT2 TSL 5 BASIC15.85■□□□□ 0.13
CLK1P49759 AC114488.2-214ENST00000609033 813 ntTSL 5 BASIC15.85■□□□□ 0.13
CLK1P49759 AC019129.2-201ENST00000609837 1235 ntBASIC15.85■□□□□ 0.13
CLK1P49759 TXNDC12-205ENST00000610127 806 ntTSL 2 BASIC15.85■□□□□ 0.13
CLK1P49759 LCE1E-203ENST00000619588 267 ntAPPRIS ALT2 TSL 5 BASIC15.85■□□□□ 0.13
CLK1P49759 AL513523.2-201ENST00000633218 660 ntTSL 3 BASIC15.85■□□□□ 0.13
CLK1P49759 SHMT2-232ENST00000557487 1918 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
CLK1P49759 PAFAH1B1-202ENST00000397195 5497 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
CLK1P49759 ZNF84-208ENST00000539354 3237 ntAPPRIS P2 TSL 1 (best) BASIC15.85■□□□□ 0.13
CLK1P49759 DCST1-201ENST00000295542 2279 ntAPPRIS P3 TSL 2 BASIC15.85■□□□□ 0.13
CLK1P49759 LONRF1-201ENST00000398246 3594 ntAPPRIS P1 TSL 5 BASIC15.85■□□□□ 0.13
CLK1P49759 FXN-201ENST00000377270 2608 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
CLK1P49759 OGG1-206ENST00000349503 1950 ntTSL 5 BASIC15.85■□□□□ 0.13
CLK1P49759 BBC3-201ENST00000300880 1347 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
CLK1P49759 ST3GAL5-229ENST00000638986 2331 ntAPPRIS ALT2 TSL 5 BASIC15.85■□□□□ 0.13
CLK1P49759 DYRK1B-203ENST00000430012 2007 ntAPPRIS ALT1 TSL 5 BASIC15.85■□□□□ 0.13
CLK1P49759 PODNL1-204ENST00000538517 2744 ntTSL 2 BASIC15.85■□□□□ 0.13
CLK1P49759 LPAR3-201ENST00000370611 1720 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
CLK1P49759 LINC00323-202ENST00000441268 2095 ntTSL 2 BASIC15.85■□□□□ 0.13
CLK1P49759 PGRMC1-202ENST00000535419 1762 ntTSL 2 BASIC15.85■□□□□ 0.13
CLK1P49759 IRF3-202ENST00000377135 1442 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
CLK1P49759 TMEM106C-203ENST00000449758 1414 ntTSL 2 BASIC15.85■□□□□ 0.13
CLK1P49759 ABCB9-216ENST00000542678 6051 ntAPPRIS P2 TSL 1 (best) BASIC15.85■□□□□ 0.13
CLK1P49759 NRXN1-229ENST00000628515 3243 ntTSL 5 BASIC15.85■□□□□ 0.13
CLK1P49759 GALNT18-201ENST00000227756 2504 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
CLK1P49759 BBS7-204ENST00000506636 2570 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
CLK1P49759 IDH3G-201ENST00000217901 1485 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
CLK1P49759 INO80E-201ENST00000304516 1489 ntTSL 2 BASIC15.84■□□□□ 0.13
CLK1P49759 GOLGA2-213ENST00000610329 2212 ntTSL 2 BASIC15.84■□□□□ 0.13
CLK1P49759 ESR2-205ENST00000358599 1899 ntTSL 2 BASIC15.84■□□□□ 0.13
CLK1P49759 SBF1-201ENST00000348911 6045 ntAPPRIS ALT2 TSL 5 BASIC15.84■□□□□ 0.13
CLK1P49759 MFSD11-219ENST00000593181 1922 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
CLK1P49759 AC104809.1-201ENST00000425110 2345 ntTSL 2 BASIC15.84■□□□□ 0.13
CLK1P49759 ADAM15-205ENST00000360674 2732 ntAPPRIS ALT2 TSL 1 (best) BASIC15.84■□□□□ 0.13
CLK1P49759 AL049757.1-201ENST00000616842 1596 ntBASIC15.84■□□□□ 0.13
CLK1P49759 PBX3-204ENST00000373489 2775 ntAPPRIS P3 TSL 1 (best) BASIC15.84■□□□□ 0.13
CLK1P49759 PBX3-207ENST00000447726 2789 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
CLK1P49759 ARL15-201ENST00000502271 3248 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
CLK1P49759 BTC-201ENST00000395743 2816 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
CLK1P49759 PACS2-205ENST00000547217 2809 ntTSL 5 BASIC15.84■□□□□ 0.13
CLK1P49759 AC092068.3-201ENST00000587894 2016 ntBASIC15.84■□□□□ 0.13
CLK1P49759 HPDL-201ENST00000334815 1629 ntAPPRIS P1 BASIC15.84■□□□□ 0.13
CLK1P49759 NOS1AP-201ENST00000361897 4931 ntAPPRIS P3 TSL 1 (best) BASIC15.84■□□□□ 0.13
CLK1P49759 HSPA8-224ENST00000534624 2463 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
CLK1P49759 RAPGEFL1-209ENST00000544503 2079 ntTSL 2 BASIC15.84■□□□□ 0.13
CLK1P49759 CELF6-204ENST00000543764 1676 ntTSL 2 BASIC15.84■□□□□ 0.13
CLK1P49759 RCN1P2-201ENST00000398357 915 ntBASIC15.84■□□□□ 0.13
CLK1P49759 UBE2J2-204ENST00000400929 1057 ntTSL 3 BASIC15.84■□□□□ 0.13
CLK1P49759 GNB1L-203ENST00000405009 1076 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
CLK1P49759 TMEM213-202ENST00000413208 480 ntAPPRIS ALT2 TSL 3 BASIC15.84■□□□□ 0.13
CLK1P49759 B4GALT1-AS1-202ENST00000442432 843 ntTSL 2 BASIC15.84■□□□□ 0.13
CLK1P49759 ICAM2-203ENST00000449662 1221 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
CLK1P49759 AK2-204ENST00000467905 880 ntAPPRIS ALT1 TSL 2 BASIC15.84■□□□□ 0.13
Retrieved 100 of 98,524 protein–RNA pairs in 30.4 ms