Protein–RNA interactions for Protein: P49427

CDC34, Ubiquitin-conjugating enzyme E2 R1, humanhuman

Predicted RBP Predictions only

Length 236 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDC34P49427 TRPT1-210ENST00000541278 941 ntTSL 2 BASIC13.33□□□□□ -0.28
CDC34P49427 PSMC3IP-208ENST00000590760 664 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
CDC34P49427 AC004076.1-201ENST00000596831 664 ntAPPRIS P1 TSL 2 BASIC13.33□□□□□ -0.28
CDC34P49427 MIMT1-202ENST00000599641 1290 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
CDC34P49427 C16orf74-203ENST00000602675 744 ntAPPRIS ALT2 TSL 1 (best) BASIC13.33□□□□□ -0.28
CDC34P49427 IFNL4-202ENST00000616270 1132 ntAPPRIS ALT2 TSL 1 (best) BASIC13.33□□□□□ -0.28
CDC34P49427 AL590094.1-202ENST00000634619 1131 ntTSL 5 BASIC13.33□□□□□ -0.28
CDC34P49427 SPRED2-206ENST00000443619 1800 ntAPPRIS P1 TSL 2 BASIC13.33□□□□□ -0.28
CDC34P49427 PPP1R26-204ENST00000604351 4640 ntAPPRIS P1 TSL 3 BASIC13.33□□□□□ -0.28
CDC34P49427 KMT2E-202ENST00000311117 6874 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
CDC34P49427 BVES-202ENST00000336775 1663 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
CDC34P49427 SH2D2A-202ENST00000368199 1658 ntAPPRIS P3 TSL 1 (best) BASIC13.33□□□□□ -0.28
CDC34P49427 PYCR1-201ENST00000329875 1855 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
CDC34P49427 MAP7-207ENST00000616617 4326 ntAPPRIS ALT2 TSL 5 BASIC13.33□□□□□ -0.28
CDC34P49427 KCP-208ENST00000620378 4515 ntAPPRIS ALT2 TSL 5 BASIC13.33□□□□□ -0.28
CDC34P49427 SLC39A13-201ENST00000354884 2289 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
CDC34P49427 AC007495.1-201ENST00000501259 2678 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
CDC34P49427 MOXD1-202ENST00000367963 3059 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
CDC34P49427 UBTF-204ENST00000436088 2738 ntAPPRIS P1 TSL 2 BASIC13.33□□□□□ -0.28
CDC34P49427 KIAA1211-201ENST00000264229 4109 ntAPPRIS P2 TSL 2 BASIC13.32□□□□□ -0.28
CDC34P49427 UPP1-203ENST00000395564 1375 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
CDC34P49427 MIR4300HG-201ENST00000500502 1397 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
CDC34P49427 CTXND1-201ENST00000560778 6890 ntAPPRIS P1 TSL 3 BASIC13.32□□□□□ -0.28
CDC34P49427 PRAMEF20-201ENST00000316412 1597 ntAPPRIS P1 TSL 5 BASIC13.32□□□□□ -0.28
CDC34P49427 MTG1-201ENST00000317502 1560 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
CDC34P49427 LINC00311-201ENST00000366314 1566 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
CDC34P49427 PLEKHN1-201ENST00000379407 2194 ntAPPRIS ALT2 TSL 1 (best) BASIC13.32□□□□□ -0.28
CDC34P49427 TMPO-AS1-202ENST00000548760 3357 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
CDC34P49427 PPL-205ENST00000590782 5845 ntAPPRIS ALT1 TSL 5 BASIC13.32□□□□□ -0.28
CDC34P49427 CACFD1-206ENST00000540581 2880 ntAPPRIS ALT2 TSL 2 BASIC13.32□□□□□ -0.28
CDC34P49427 OSBP2-201ENST00000332585 4340 ntAPPRIS P3 TSL 1 (best) BASIC13.32□□□□□ -0.28
CDC34P49427 HGNC:24955-201ENST00000303177 2452 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
CDC34P49427 SNX31-201ENST00000311812 2457 ntAPPRIS P1 TSL 2 BASIC13.32□□□□□ -0.28
CDC34P49427 APP-204ENST00000357903 3543 ntAPPRIS ALT2 TSL 1 (best) BASIC13.32□□□□□ -0.28
CDC34P49427 RASA4B-202ENST00000465829 2931 ntAPPRIS ALT1 TSL 1 (best) BASIC13.32□□□□□ -0.28
CDC34P49427 FKBP3-201ENST00000216330 1684 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
CDC34P49427 COPS3-212ENST00000539941 1699 ntTSL 2 BASIC13.32□□□□□ -0.28
CDC34P49427 SPRED1-201ENST00000299084 7780 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
CDC34P49427 C14orf79-205ENST00000549240 2503 ntAPPRIS ALT2 TSL 2 BASIC13.32□□□□□ -0.28
CDC34P49427 SSSCA1-201ENST00000309328 698 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
CDC34P49427 LCE1D-201ENST00000326233 430 ntAPPRIS P1 TSL 5 BASIC13.32□□□□□ -0.28
CDC34P49427 AC092159.3-201ENST00000439196 571 ntTSL 4 BASIC13.32□□□□□ -0.28
CDC34P49427 TMEM263-208ENST00000551489 621 ntTSL 4 BASIC13.32□□□□□ -0.28
CDC34P49427 AC026471.3-201ENST00000565137 578 ntTSL 2 BASIC13.32□□□□□ -0.28
CDC34P49427 DCTPP1-204ENST00000568434 853 ntTSL 2 BASIC13.32□□□□□ -0.28
CDC34P49427 AL929554.1-201ENST00000568665 460 ntAPPRIS P1 TSL 3 BASIC13.32□□□□□ -0.28
CDC34P49427 GPX4-207ENST00000589115 812 ntTSL 2 BASIC13.32□□□□□ -0.28
CDC34P49427 JADE2-211ENST00000612830 1251 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
CDC34P49427 PRMT5-203ENST00000397440 1907 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
CDC34P49427 PCDHGB2-202ENST00000622527 2588 ntAPPRIS P1 BASIC13.32□□□□□ -0.28
CDC34P49427 REEP1-208ENST00000538924 1702 ntTSL 5 BASIC13.32□□□□□ -0.28
CDC34P49427 C22orf39-205ENST00000542103 1523 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
CDC34P49427 KLHDC8B-201ENST00000332780 1959 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
CDC34P49427 PCBP3-204ENST00000400309 1986 ntAPPRIS ALT2 TSL 5 BASIC13.32□□□□□ -0.28
CDC34P49427 ETV3L-201ENST00000454449 1976 ntAPPRIS P1 TSL 2 BASIC13.32□□□□□ -0.28
CDC34P49427 LRRC57-204ENST00000563454 2407 ntAPPRIS P1 TSL 2 BASIC13.32□□□□□ -0.28
CDC34P49427 ETV4-205ENST00000545954 1775 ntTSL 2 BASIC13.32□□□□□ -0.28
CDC34P49427 KCNC1-201ENST00000265969 4295 ntAPPRIS P1 TSL 5 BASIC13.32□□□□□ -0.28
CDC34P49427 AP001372.2-201ENST00000526036 2493 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
CDC34P49427 C1RL-210ENST00000544702 1569 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
CDC34P49427 EIF4G1-212ENST00000424196 5653 ntTSL 2 BASIC13.32□□□□□ -0.28
CDC34P49427 TPM1-205ENST00000357980 1800 ntTSL 2 BASIC13.32□□□□□ -0.28
CDC34P49427 TPD52L2-205ENST00000352482 2339 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
CDC34P49427 TPD52L2-210ENST00000615907 2310 ntTSL 4 BASIC13.31□□□□□ -0.28
CDC34P49427 NOTCH2NL-201ENST00000362074 1874 ntAPPRIS P2 TSL 1 (best) BASIC13.31□□□□□ -0.28
CDC34P49427 C6orf106-203ENST00000374026 4232 ntAPPRIS ALT2 TSL 2 BASIC13.31□□□□□ -0.28
CDC34P49427 PAQR6-204ENST00000356983 2143 ntAPPRIS ALT1 TSL 2 BASIC13.31□□□□□ -0.28
CDC34P49427 FSTL3-206ENST00000592947 2144 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
CDC34P49427 SLC2A13-202ENST00000380858 3082 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
CDC34P49427 POMC-204ENST00000405623 1426 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
CDC34P49427 ZNF628-203ENST00000598519 3847 ntAPPRIS P2 TSL 1 (best) BASIC13.31□□□□□ -0.28
CDC34P49427 AC092718.8-201ENST00000640345 2892 ntAPPRIS P1 TSL 5 BASIC13.31□□□□□ -0.28
CDC34P49427 ADAMTS15-201ENST00000299164 5673 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
CDC34P49427 AL596087.1-201ENST00000400979 1969 ntBASIC13.31□□□□□ -0.28
CDC34P49427 ISPD-202ENST00000407010 5524 ntAPPRIS P1 TSL 5 BASIC13.31□□□□□ -0.28
CDC34P49427 SIX6-201ENST00000327720 2787 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
CDC34P49427 ANXA11-203ENST00000422982 2534 ntAPPRIS P3 TSL 1 (best) BASIC13.31□□□□□ -0.28
CDC34P49427 IRAK1-204ENST00000393687 2049 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
CDC34P49427 C17orf100-201ENST00000542475 1756 ntAPPRIS P1 BASIC13.31□□□□□ -0.28
CDC34P49427 PIR-202ENST00000380421 1539 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
CDC34P49427 CDIPT-209ENST00000569956 1532 ntAPPRIS P1 TSL 5 BASIC13.31□□□□□ -0.28
CDC34P49427 FUT8-AS1-201ENST00000621019 1521 ntBASIC13.31□□□□□ -0.28
CDC34P49427 INGX-201ENST00000359239 846 ntBASIC13.31□□□□□ -0.28
CDC34P49427 PEX7-202ENST00000367756 680 ntTSL 3 BASIC13.31□□□□□ -0.28
CDC34P49427 SLC35A2-202ENST00000376512 903 ntTSL 2 BASIC13.31□□□□□ -0.28
CDC34P49427 DARS-AS1-202ENST00000419808 772 ntTSL 5 BASIC13.31□□□□□ -0.28
CDC34P49427 ZNF655-218ENST00000454654 571 ntTSL 4 BASIC13.31□□□□□ -0.28
CDC34P49427 AL136307.1-201ENST00000454882 411 ntTSL 2 BASIC13.31□□□□□ -0.28
CDC34P49427 GLYCTK-205ENST00000473032 935 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
CDC34P49427 PDCD6-206ENST00000507528 1088 ntAPPRIS ALT1 TSL 1 (best) BASIC13.31□□□□□ -0.28
CDC34P49427 PDCD6-207ENST00000509581 1156 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
CDC34P49427 LINC00599-204ENST00000521242 716 ntTSL 3 BASIC13.31□□□□□ -0.28
CDC34P49427 DRAP1-205ENST00000527119 581 ntTSL 5 BASIC13.31□□□□□ -0.28
CDC34P49427 AC079031.1-201ENST00000542627 1035 ntTSL 3 BASIC13.31□□□□□ -0.28
CDC34P49427 AC009477.2-201ENST00000635976 171 ntAPPRIS P1 BASIC13.31□□□□□ -0.28
CDC34P49427 RNF187-203ENST00000639044 708 ntAPPRIS P2 TSL 1 (best) BASIC13.31□□□□□ -0.28
CDC34P49427 SEC63-201ENST00000369002 6411 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
CDC34P49427 LMF2-202ENST00000474879 2582 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
CDC34P49427 NECAP2-201ENST00000337132 2070 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
CDC34P49427 CFAP100-201ENST00000352312 2086 ntAPPRIS P2 TSL 2 BASIC13.31□□□□□ -0.28
Retrieved 100 of 98,524 protein–RNA pairs in 23.7 ms