Protein–RNA interactions for Protein: P46736

BRCC3, Lys-63-specific deubiquitinase BRCC36, humanhuman

Predictions only

Length 316 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BRCC3P46736 DEF8-225ENST00000569453 1852 ntAPPRIS P4 TSL 2 BASIC17.8■□□□□ 0.44
BRCC3P46736 MZF1-206ENST00000599369 2587 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
BRCC3P46736 DEPTOR-203ENST00000523492 1397 ntTSL 2 BASIC17.79■□□□□ 0.44
BRCC3P46736 THAP8-201ENST00000292894 1825 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
BRCC3P46736 PTGER3-208ENST00000370932 1841 ntAPPRIS ALT2 TSL 5 BASIC17.79■□□□□ 0.44
BRCC3P46736 ZNF57-201ENST00000306908 2003 ntAPPRIS P2 TSL 1 (best) BASIC17.79■□□□□ 0.44
BRCC3P46736 ZNF57-205ENST00000614108 2002 ntAPPRIS ALT2 TSL 5 BASIC17.79■□□□□ 0.44
BRCC3P46736 TUBB3P1-201ENST00000405796 1332 ntBASIC17.79■□□□□ 0.44
BRCC3P46736 PARD3-201ENST00000340077 3518 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
BRCC3P46736 TTC24-202ENST00000368237 1969 ntAPPRIS P1 TSL 5 BASIC17.79■□□□□ 0.44
BRCC3P46736 WDR13-202ENST00000376729 5469 ntAPPRIS P1 TSL 5 BASIC17.79■□□□□ 0.44
BRCC3P46736 TEF-201ENST00000266304 4394 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
BRCC3P46736 TACR2-202ENST00000373307 1740 ntTSL 2 BASIC17.79■□□□□ 0.44
BRCC3P46736 SHE-201ENST00000304760 6243 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
BRCC3P46736 JMJD4-201ENST00000366758 2595 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
BRCC3P46736 WWOX-201ENST00000355860 710 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
BRCC3P46736 LY6G6C-201ENST00000375819 992 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
BRCC3P46736 CTRC-202ENST00000375949 898 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
BRCC3P46736 CD81-202ENST00000381036 880 ntTSL 3 BASIC17.79■□□□□ 0.44
BRCC3P46736 VCX-202ENST00000381059 967 ntAPPRIS P2 TSL 1 (best) BASIC17.79■□□□□ 0.44
BRCC3P46736 WDR53-204ENST00000433160 887 ntTSL 5 BASIC17.79■□□□□ 0.44
BRCC3P46736 IL32-206ENST00000440815 920 ntAPPRIS P4 TSL 2 BASIC17.79■□□□□ 0.44
BRCC3P46736 AC004865.2-202ENST00000444348 852 ntTSL 3 BASIC17.79■□□□□ 0.44
BRCC3P46736 IL32-207ENST00000444393 892 ntAPPRIS P4 TSL 2 BASIC17.79■□□□□ 0.44
BRCC3P46736 KRT18P34-201ENST00000488218 1270 ntBASIC17.79■□□□□ 0.44
BRCC3P46736 IL32-219ENST00000531965 746 ntAPPRIS ALT2 TSL 1 (best) BASIC17.79■□□□□ 0.44
BRCC3P46736 ALG1L8P-201ENST00000533887 760 ntBASIC17.79■□□□□ 0.44
BRCC3P46736 IL32-226ENST00000548476 1014 ntAPPRIS ALT2 TSL 2 BASIC17.79■□□□□ 0.44
BRCC3P46736 AL133467.1-201ENST00000554161 993 ntTSL 2 BASIC17.79■□□□□ 0.44
BRCC3P46736 LINC02084-201ENST00000606069 1096 ntBASIC17.79■□□□□ 0.44
BRCC3P46736 PDX1-201ENST00000381033 2501 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
BRCC3P46736 GYPC-202ENST00000356887 2067 ntAPPRIS ALT2 TSL 1 (best) BASIC17.79■□□□□ 0.44
BRCC3P46736 WASF1-205ENST00000392587 2675 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
BRCC3P46736 MATN3-202ENST00000421259 1443 ntAPPRIS ALT2 TSL 1 (best) BASIC17.79■□□□□ 0.44
BRCC3P46736 NLE1-203ENST00000586869 5286 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
BRCC3P46736 LMBR1L-204ENST00000547382 2235 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
BRCC3P46736 DVL2-201ENST00000005340 3018 ntAPPRIS P2 TSL 1 (best) BASIC17.79■□□□□ 0.44
BRCC3P46736 ARHGEF18-201ENST00000319670 5212 ntAPPRIS P3 TSL 1 (best) BASIC17.79■□□□□ 0.44
BRCC3P46736 P2RY6-202ENST00000393590 2398 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
BRCC3P46736 NOX4-215ENST00000534731 2156 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
BRCC3P46736 AP005329.2-201ENST00000580139 1771 ntTSL 2 BASIC17.79■□□□□ 0.44
BRCC3P46736 FGFBP1-201ENST00000382333 1359 ntAPPRIS P1 TSL 3 BASIC17.79■□□□□ 0.44
BRCC3P46736 MAGI3-201ENST00000307546 6430 ntTSL 5 BASIC17.78■□□□□ 0.44
BRCC3P46736 TRIM11-202ENST00000366699 2511 ntTSL 2 BASIC17.78■□□□□ 0.44
BRCC3P46736 ZNF419-201ENST00000221735 2309 ntAPPRIS ALT2 TSL 1 (best) BASIC17.78■□□□□ 0.44
BRCC3P46736 GJA3-201ENST00000241125 5211 ntAPPRIS P1 TSL 3 BASIC17.78■□□□□ 0.44
BRCC3P46736 AL645728.1-201ENST00000366221 2101 ntBASIC17.78■□□□□ 0.44
BRCC3P46736 SGK3-206ENST00000520976 2483 ntTSL 2 BASIC17.78■□□□□ 0.44
BRCC3P46736 CARNS1-202ENST00000445895 3971 ntAPPRIS P1 TSL 5 BASIC17.78■□□□□ 0.44
BRCC3P46736 WDR90-209ENST00000547944 1672 ntTSL 2 BASIC17.78■□□□□ 0.44
BRCC3P46736 STX2-201ENST00000261653 3331 ntAPPRIS ALT1 TSL 1 (best) BASIC17.78■□□□□ 0.44
BRCC3P46736 TBX18-202ENST00000369663 6245 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
BRCC3P46736 ABHD3-209ENST00000580981 1836 ntTSL 5 BASIC17.78■□□□□ 0.44
BRCC3P46736 LRRC37A5P-201ENST00000374304 1103 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
BRCC3P46736 HSD17B10-203ENST00000375304 916 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
BRCC3P46736 TEX30-202ENST00000376021 1038 ntTSL 2 BASIC17.78■□□□□ 0.44
BRCC3P46736 LINC00398-201ENST00000414407 906 ntTSL 2 BASIC17.78■□□□□ 0.44
BRCC3P46736 CNN2P2-201ENST00000443536 909 ntBASIC17.78■□□□□ 0.44
BRCC3P46736 AL391069.2-202ENST00000447795 622 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
BRCC3P46736 CNN2P3-201ENST00000450201 906 ntBASIC17.78■□□□□ 0.44
BRCC3P46736 GATD1-206ENST00000526325 756 ntTSL 5 BASIC17.78■□□□□ 0.44
BRCC3P46736 SPCS2P1-201ENST00000561636 679 ntBASIC17.78■□□□□ 0.44
BRCC3P46736 AC051619.7-201ENST00000568314 623 ntBASIC17.78■□□□□ 0.44
BRCC3P46736 AJ003147.2-201ENST00000576468 629 ntTSL 3 BASIC17.78■□□□□ 0.44
BRCC3P46736 PCDHGC4-204ENST00000618371 812 ntTSL 3 BASIC17.78■□□□□ 0.44
BRCC3P46736 AL136317.3-201ENST00000618497 906 ntBASIC17.78■□□□□ 0.44
BRCC3P46736 SEPT6-209ENST00000489216 1617 ntAPPRIS ALT1 TSL 1 (best) BASIC17.78■□□□□ 0.44
BRCC3P46736 CLDN5-202ENST00000406028 2548 ntTSL 2 BASIC17.78■□□□□ 0.44
BRCC3P46736 NOMO2-202ENST00000381474 3911 ntAPPRIS ALT2 TSL 5 BASIC17.78■□□□□ 0.44
BRCC3P46736 SH2D3C-205ENST00000420366 2682 ntTSL 2 BASIC17.78■□□□□ 0.44
BRCC3P46736 RHBDF1-201ENST00000262316 2992 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
BRCC3P46736 YAP1-209ENST00000537274 5350 ntAPPRIS ALT2 TSL 5 BASIC17.78■□□□□ 0.44
BRCC3P46736 AES-201ENST00000221561 1884 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
BRCC3P46736 AL391256.1-201ENST00000443260 1855 ntBASIC17.78■□□□□ 0.44
BRCC3P46736 THEM4-201ENST00000368814 2377 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
BRCC3P46736 AL139300.1-201ENST00000472726 2505 ntAPPRIS P1 TSL 2 BASIC17.77■□□□□ 0.44
BRCC3P46736 U2AF2-201ENST00000308924 1698 ntAPPRIS P3 TSL 1 (best) BASIC17.77■□□□□ 0.44
BRCC3P46736 FBXO7-201ENST00000266087 2195 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
BRCC3P46736 SLC35E2B-204ENST00000614300 2156 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
BRCC3P46736 TTLL5-219ENST00000556977 1961 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
BRCC3P46736 BDKRB2-201ENST00000539359 1600 ntTSL 2 BASIC17.77■□□□□ 0.44
BRCC3P46736 RABL6-201ENST00000311502 3091 ntAPPRIS P3 TSL 1 (best) BASIC17.77■□□□□ 0.44
BRCC3P46736 PROC-201ENST00000234071 1773 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
BRCC3P46736 KBTBD11-201ENST00000320248 6710 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
BRCC3P46736 MRPL2-201ENST00000230413 899 ntTSL 2 BASIC17.77■□□□□ 0.44
BRCC3P46736 SIVA1-202ENST00000347067 550 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
BRCC3P46736 S100A14-204ENST00000368702 1218 ntAPPRIS P1 TSL 3 BASIC17.77■□□□□ 0.44
BRCC3P46736 AC021188.1-201ENST00000421534 740 ntTSL 3 BASIC17.77■□□□□ 0.44
BRCC3P46736 AL451069.2-201ENST00000428814 297 ntTSL 3 BASIC17.77■□□□□ 0.44
BRCC3P46736 AP001471.1-201ENST00000454245 672 ntTSL 3 BASIC17.77■□□□□ 0.44
BRCC3P46736 S100A14-206ENST00000476873 1025 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
BRCC3P46736 RAB7A-204ENST00000483906 533 ntTSL 3 BASIC17.77■□□□□ 0.44
BRCC3P46736 AC067863.1-201ENST00000494933 530 ntBASIC17.77■□□□□ 0.44
BRCC3P46736 CERNA1-201ENST00000559779 908 ntTSL 3 BASIC17.77■□□□□ 0.44
BRCC3P46736 Z97055.2-201ENST00000563715 859 ntTSL 3 BASIC17.77■□□□□ 0.44
BRCC3P46736 MOB3A-209ENST00000592280 1071 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
BRCC3P46736 AC011467.4-201ENST00000594891 528 ntBASIC17.77■□□□□ 0.44
BRCC3P46736 CLN3-246ENST00000636228 1224 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
BRCC3P46736 LINC00963-208ENST00000454968 1403 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
BRCC3P46736 RAB37-208ENST00000402449 1560 ntAPPRIS P3 TSL 2 BASIC17.77■□□□□ 0.44
Retrieved 100 of 98,524 protein–RNA pairs in 49.1 ms