Protein–RNA interactions for Protein: P40938

RFC3, Replication factor C subunit 3, humanhuman

Predictions only

Length 356 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFC3P40938 NECAP2-208ENST00000504551 768 ntTSL 5 BASIC15.39■□□□□ 0.05
RFC3P40938 BATF2-204ENST00000527716 1230 ntTSL 2 BASIC15.39■□□□□ 0.05
RFC3P40938 OR10S1-201ENST00000531945 1121 ntAPPRIS P2 BASIC15.39■□□□□ 0.05
RFC3P40938 MMP17-203ENST00000535004 719 ntTSL 3 BASIC15.39■□□□□ 0.05
RFC3P40938 NDUFS7-216ENST00000546283 1060 ntTSL 2 BASIC15.39■□□□□ 0.05
RFC3P40938 TMEM263-206ENST00000550344 925 ntAPPRIS P1 TSL 2 BASIC15.39■□□□□ 0.05
RFC3P40938 IGHV3OR16-6-201ENST00000568775 360 ntBASIC15.39■□□□□ 0.05
RFC3P40938 AC093028.1-201ENST00000622998 982 ntBASIC15.39■□□□□ 0.05
RFC3P40938 OR10S1-202ENST00000641123 1121 ntAPPRIS ALT2 BASIC15.39■□□□□ 0.05
RFC3P40938 KCNK9-203ENST00000520439 1441 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
RFC3P40938 FBXO18-201ENST00000362091 3560 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
RFC3P40938 PODNL1-201ENST00000254320 1859 ntTSL 2 BASIC15.39■□□□□ 0.05
RFC3P40938 ELL-203ENST00000596124 1852 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
RFC3P40938 DLG4-201ENST00000302955 3184 ntAPPRIS P3 TSL 5 BASIC15.39■□□□□ 0.05
RFC3P40938 DLG4-202ENST00000399506 3185 ntAPPRIS ALT1 TSL 2 BASIC15.39■□□□□ 0.05
RFC3P40938 SLX1A-SULT1A3-202ENST00000565342 2195 ntTSL 2 BASIC15.39■□□□□ 0.05
RFC3P40938 SALL3-202ENST00000537592 6555 ntAPPRIS P1 TSL 5 BASIC15.39■□□□□ 0.05
RFC3P40938 DAPK1-202ENST00000408954 5892 ntAPPRIS P1 TSL 2 BASIC15.39■□□□□ 0.05
RFC3P40938 SARDH-202ENST00000371867 1326 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
RFC3P40938 UNC13A-206ENST00000552293 5314 ntAPPRIS ALT2 TSL 5 BASIC15.39■□□□□ 0.05
RFC3P40938 TPD52L1-213ENST00000534000 2356 ntAPPRIS P3 TSL 1 (best) BASIC15.39■□□□□ 0.05
RFC3P40938 GRAMD1A-211ENST00000599564 2825 ntTSL 5 BASIC15.39■□□□□ 0.05
RFC3P40938 CDC25B-204ENST00000379598 2990 ntTSL 2 BASIC15.39■□□□□ 0.05
RFC3P40938 ARID1A-205ENST00000457599 6268 ntAPPRIS ALT2 TSL 5 BASIC15.39■□□□□ 0.05
RFC3P40938 BICD2-201ENST00000356884 6427 ntAPPRIS ALT2 TSL 1 (best) BASIC15.39■□□□□ 0.05
RFC3P40938 MYH14-202ENST00000376970 6787 ntAPPRIS ALT2 TSL 5 BASIC15.38■□□□□ 0.05
RFC3P40938 ANKRD26P3-201ENST00000454044 2748 ntBASIC15.38■□□□□ 0.05
RFC3P40938 LRCH3-201ENST00000334859 2258 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
RFC3P40938 LINC00896-202ENST00000609602 2128 ntBASIC15.38■□□□□ 0.05
RFC3P40938 ELF2-207ENST00000510408 1965 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
RFC3P40938 SLC27A5-207ENST00000601355 1987 ntAPPRIS ALT2 TSL 2 BASIC15.38■□□□□ 0.05
RFC3P40938 PCCB-201ENST00000251654 1833 ntAPPRIS P3 TSL 1 (best) BASIC15.38■□□□□ 0.05
RFC3P40938 CDIPT-209ENST00000569956 1532 ntAPPRIS P1 TSL 5 BASIC15.38■□□□□ 0.05
RFC3P40938 TPSAB1-202ENST00000461509 1357 ntAPPRIS ALT2 TSL 1 (best) BASIC15.38■□□□□ 0.05
RFC3P40938 SIRT6-214ENST00000601488 1361 ntTSL 3 BASIC15.38■□□□□ 0.05
RFC3P40938 RGS3-211ENST00000462403 2155 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
RFC3P40938 MUS81-215ENST00000533035 2180 ntTSL 5 BASIC15.38■□□□□ 0.05
RFC3P40938 MTHFD2L-203ENST00000395759 2354 ntAPPRIS P2 TSL 5 BASIC15.38■□□□□ 0.05
RFC3P40938 AC016396.2-201ENST00000562575 1417 ntBASIC15.38■□□□□ 0.05
RFC3P40938 SACS-AS1-201ENST00000443092 2234 ntTSL 2 BASIC15.38■□□□□ 0.05
RFC3P40938 AP000347.2-202ENST00000421064 3041 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
RFC3P40938 RWDD3-201ENST00000263893 1078 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
RFC3P40938 CRYBA2-201ENST00000295728 893 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
RFC3P40938 STOM-202ENST00000347359 870 ntTSL 2 BASIC15.38■□□□□ 0.05
RFC3P40938 LINC01640-201ENST00000452505 550 ntTSL 4 BASIC15.38■□□□□ 0.05
RFC3P40938 MLF1-210ENST00000484955 1247 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
RFC3P40938 AP000344.2-201ENST00000512987 629 ntBASIC15.38■□□□□ 0.05
RFC3P40938 CTBP1-AS2-204ENST00000514984 533 ntTSL 4 BASIC15.38■□□□□ 0.05
RFC3P40938 LEPROTL1-203ENST00000518001 589 ntTSL 4 BASIC15.38■□□□□ 0.05
RFC3P40938 MIR4515-201ENST00000584082 81 ntBASIC15.38■□□□□ 0.05
RFC3P40938 AC022145.2-201ENST00000598203 171 ntBASIC15.38■□□□□ 0.05
RFC3P40938 FSTL3-207ENST00000605925 748 ntTSL 4 BASIC15.38■□□□□ 0.05
RFC3P40938 AC099522.2-201ENST00000607001 744 ntBASIC15.38■□□□□ 0.05
RFC3P40938 AC105339.1-204ENST00000636249 355 ntBASIC15.38■□□□□ 0.05
RFC3P40938 AL645728.2-201ENST00000641974 660 ntBASIC15.38■□□□□ 0.05
RFC3P40938 AL162586.1-201ENST00000439298 2055 ntTSL 2 BASIC15.38■□□□□ 0.05
RFC3P40938 TMEM127-202ENST00000432959 3099 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
RFC3P40938 PRR5-203ENST00000403581 2279 ntTSL 2 BASIC15.38■□□□□ 0.05
RFC3P40938 NPM2-209ENST00000521157 1484 ntAPPRIS P2 TSL 5 BASIC15.38■□□□□ 0.05
RFC3P40938 DKK3-201ENST00000326932 2636 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
RFC3P40938 LUC7L2-202ENST00000354926 2645 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
RFC3P40938 NR1H3-204ENST00000407404 1330 ntTSL 5 BASIC15.38■□□□□ 0.05
RFC3P40938 GMDS-AS1-201ENST00000456943 2308 ntTSL 2 BASIC15.38■□□□□ 0.05
RFC3P40938 PCDHGC3-205ENST00000617641 2346 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
RFC3P40938 SDCBP-201ENST00000260130 2167 ntAPPRIS P3 TSL 1 (best) BASIC15.38■□□□□ 0.05
RFC3P40938 ZMYND11-208ENST00000397962 2150 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
RFC3P40938 KDM5C-204ENST00000375401 6031 ntAPPRIS P3 TSL 1 (best) BASIC15.38■□□□□ 0.05
RFC3P40938 HYAL3-207ENST00000621157 1696 ntAPPRIS P1 TSL 5 BASIC15.38■□□□□ 0.05
RFC3P40938 TXNRD2-218ENST00000542719 2024 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
RFC3P40938 TPT1-AS1-215ENST00000522673 1519 ntTSL 5 BASIC15.38■□□□□ 0.05
RFC3P40938 AC012569.1-201ENST00000591191 1524 ntBASIC15.38■□□□□ 0.05
RFC3P40938 SYT6-205ENST00000609117 4424 ntTSL 5 BASIC15.37■□□□□ 0.05
RFC3P40938 NAT9-201ENST00000357814 1875 ntTSL 1 (best) BASIC15.37■□□□□ 0.05
RFC3P40938 C8orf34-206ENST00000518698 2223 ntAPPRIS P2 TSL 2 BASIC15.37■□□□□ 0.05
RFC3P40938 DCAF12L2-201ENST00000360028 2599 ntAPPRIS P1 BASIC15.37■□□□□ 0.05
RFC3P40938 VRK1-201ENST00000216639 1745 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
RFC3P40938 ZNF580-202ENST00000543039 1707 ntAPPRIS P1 BASIC15.37■□□□□ 0.05
RFC3P40938 AC003002.1-202ENST00000596755 1743 ntAPPRIS P1 BASIC15.37■□□□□ 0.05
RFC3P40938 MCM9-201ENST00000316068 2442 ntTSL 1 (best) BASIC15.37■□□□□ 0.05
RFC3P40938 SLC8A2-201ENST00000236877 5234 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
RFC3P40938 CDC25A-202ENST00000351231 3663 ntTSL 1 (best) BASIC15.37■□□□□ 0.05
RFC3P40938 PBK-201ENST00000301905 2118 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
RFC3P40938 HARS-204ENST00000438307 1789 ntTSL 2 BASIC15.37■□□□□ 0.05
RFC3P40938 ERO1A-201ENST00000395686 5285 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
RFC3P40938 TECR-201ENST00000215567 1171 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
RFC3P40938 IFNL1-201ENST00000333625 857 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
RFC3P40938 AC002056.1-201ENST00000395613 760 ntBASIC15.37■□□□□ 0.05
RFC3P40938 FAM19A5-204ENST00000406880 833 ntTSL 3 BASIC15.37■□□□□ 0.05
RFC3P40938 HMGA1P7-201ENST00000406908 502 ntBASIC15.37■□□□□ 0.05
RFC3P40938 HHATL-AS1-201ENST00000423165 557 ntTSL 4 BASIC15.37■□□□□ 0.05
RFC3P40938 TSEN15P1-201ENST00000423257 515 ntBASIC15.37■□□□□ 0.05
RFC3P40938 MIPEPP3-202ENST00000424756 347 ntTSL 3 BASIC15.37■□□□□ 0.05
RFC3P40938 PON3-203ENST00000427422 894 ntTSL 3 BASIC15.37■□□□□ 0.05
RFC3P40938 Z97056.1-201ENST00000433230 556 ntTSL 2 BASIC15.37■□□□□ 0.05
RFC3P40938 AC140658.5-201ENST00000438532 169 ntBASIC15.37■□□□□ 0.05
RFC3P40938 SLC22A18-206ENST00000449793 1225 ntTSL 5 BASIC15.37■□□□□ 0.05
RFC3P40938 AC004835.2-201ENST00000603762 682 ntBASIC15.37■□□□□ 0.05
RFC3P40938 BSG-214ENST00000614867 960 ntTSL 3 BASIC15.37■□□□□ 0.05
RFC3P40938 RAB9A-203ENST00000618931 737 ntAPPRIS P1 TSL 2 BASIC15.37■□□□□ 0.05
RFC3P40938 AL513210.1-201ENST00000629608 234 ntBASIC15.37■□□□□ 0.05
Retrieved 100 of 98,524 protein–RNA pairs in 32 ms