Protein–RNA interactions for Protein: P35914

HMGCL, Hydroxymethylglutaryl-CoA lyase, mitochondrial, humanhuman

Predictions only

Length 325 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCLP35914 ZNF446-201ENST00000335841 1889 ntTSL 5 BASIC16.69■□□□□ 0.26
HMGCLP35914 AP001189.5-201ENST00000637683 1413 ntTSL 5 BASIC16.69■□□□□ 0.26
HMGCLP35914 DCAF12L2-201ENST00000360028 2599 ntAPPRIS P1 BASIC16.69■□□□□ 0.26
HMGCLP35914 JMJD4-206ENST00000615711 2591 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
HMGCLP35914 PCGF1-201ENST00000233630 1792 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
HMGCLP35914 RBM4-204ENST00000408993 1763 ntAPPRIS P1 TSL 5 BASIC16.69■□□□□ 0.26
HMGCLP35914 SFN-201ENST00000339276 1320 ntAPPRIS P1 BASIC16.69■□□□□ 0.26
HMGCLP35914 DLG4-202ENST00000399506 3185 ntAPPRIS ALT1 TSL 2 BASIC16.69■□□□□ 0.26
HMGCLP35914 KIAA1324L-207ENST00000444627 3527 ntTSL 5 BASIC16.69■□□□□ 0.26
HMGCLP35914 SERF2-203ENST00000381359 1931 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
HMGCLP35914 OPN5-204ENST00000489301 1931 ntAPPRIS ALT2 TSL 5 BASIC16.68■□□□□ 0.26
HMGCLP35914 ACAP1-201ENST00000158762 2512 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
HMGCLP35914 PPP3CA-201ENST00000323055 4519 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
HMGCLP35914 ARID5A-201ENST00000357485 2188 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
HMGCLP35914 SPSB2-203ENST00000519357 1496 ntTSL 2 BASIC16.68■□□□□ 0.26
HMGCLP35914 AP2A2-222ENST00000534328 1491 ntTSL 5 BASIC16.68■□□□□ 0.26
HMGCLP35914 AC099398.1-201ENST00000567919 2776 ntBASIC16.68■□□□□ 0.26
HMGCLP35914 GDPD5-214ENST00000533784 2441 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
HMGCLP35914 C17orf62-201ENST00000306645 2093 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
HMGCLP35914 LINC00323-202ENST00000441268 2095 ntTSL 2 BASIC16.68■□□□□ 0.26
HMGCLP35914 RPS6KB1-203ENST00000406116 1982 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
HMGCLP35914 CCDC154-202ENST00000409671 2561 ntAPPRIS ALT2 TSL 1 (best) BASIC16.68■□□□□ 0.26
HMGCLP35914 CLCN2-205ENST00000457512 2820 ntAPPRIS ALT2 TSL 2 BASIC16.68■□□□□ 0.26
HMGCLP35914 WDR6-202ENST00000415265 1883 ntTSL 2 BASIC16.68■□□□□ 0.26
HMGCLP35914 ABCG5-201ENST00000260645 2740 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
HMGCLP35914 ATP23-201ENST00000300145 1245 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
HMGCLP35914 SLC22A18-206ENST00000449793 1225 ntTSL 5 BASIC16.68■□□□□ 0.26
HMGCLP35914 AL807752.3-201ENST00000456356 748 ntTSL 2 BASIC16.68■□□□□ 0.26
HMGCLP35914 DDIT4-AS1-201ENST00000491934 847 ntTSL 5 BASIC16.68■□□□□ 0.26
HMGCLP35914 HIST4H4-204ENST00000539745 577 ntAPPRIS P1 BASIC16.68■□□□□ 0.26
HMGCLP35914 AC002347.1-201ENST00000569543 541 ntBASIC16.68■□□□□ 0.26
HMGCLP35914 AC068137.2-201ENST00000605408 478 ntBASIC16.68■□□□□ 0.26
HMGCLP35914 AC021097.1-201ENST00000607902 574 ntBASIC16.68■□□□□ 0.26
HMGCLP35914 NCOA5-201ENST00000290231 3220 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
HMGCLP35914 NFIX-214ENST00000592199 1509 ntTSL 5 BASIC16.68■□□□□ 0.26
HMGCLP35914 RPS5-202ENST00000596046 1520 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
HMGCLP35914 TULP2-201ENST00000221399 1754 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
HMGCLP35914 FO681492.1-201ENST00000623662 5321 ntAPPRIS P5 TSL 2 BASIC16.68■□□□□ 0.26
HMGCLP35914 TTC24-201ENST00000368236 2005 ntAPPRIS P1 TSL 5 BASIC16.68■□□□□ 0.26
HMGCLP35914 PHF20L1-220ENST00000622263 3375 ntAPPRIS P1 TSL 5 BASIC16.68■□□□□ 0.26
HMGCLP35914 SENP1-204ENST00000549518 2260 ntAPPRIS P2 TSL 1 (best) BASIC16.68■□□□□ 0.26
HMGCLP35914 PCDHGC5-202ENST00000610789 2763 ntAPPRIS ALT2 BASIC16.68■□□□□ 0.26
HMGCLP35914 AL139384.1-201ENST00000612143 3047 ntBASIC16.68■□□□□ 0.26
HMGCLP35914 RAB15-203ENST00000533601 3515 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
HMGCLP35914 UGT3A2-204ENST00000513300 1924 ntTSL 2 BASIC16.68■□□□□ 0.26
HMGCLP35914 REEP2-211ENST00000613650 1944 ntTSL 5 BASIC16.68■□□□□ 0.26
HMGCLP35914 SDCBP-201ENST00000260130 2167 ntAPPRIS P3 TSL 1 (best) BASIC16.68■□□□□ 0.26
HMGCLP35914 AL031731.1-201ENST00000642131 2094 ntBASIC16.68■□□□□ 0.26
HMGCLP35914 KLHL31-201ENST00000370905 5743 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
HMGCLP35914 PPP2R5B-201ENST00000164133 2745 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
HMGCLP35914 RUNX1-203ENST00000358356 2720 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
HMGCLP35914 ZNF623-201ENST00000458270 2733 ntAPPRIS ALT2 TSL 1 (best) BASIC16.68■□□□□ 0.26
HMGCLP35914 KPNA2-202ENST00000537025 2456 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
HMGCLP35914 ADGRB2-202ENST00000373658 5414 ntAPPRIS ALT2 TSL 5 BASIC16.67■□□□□ 0.26
HMGCLP35914 AFF2-204ENST00000370458 1488 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
HMGCLP35914 ALDH1A3-201ENST00000329841 3924 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
HMGCLP35914 FAM208A-209ENST00000493960 5600 ntAPPRIS P2 TSL 5 BASIC16.67■□□□□ 0.26
HMGCLP35914 DIAPH1-201ENST00000253811 5789 ntAPPRIS ALT2 TSL 5 BASIC16.67■□□□□ 0.26
HMGCLP35914 DIAPH1-202ENST00000389054 5795 ntAPPRIS P4 TSL 5 BASIC16.67■□□□□ 0.26
HMGCLP35914 DIAPH1-204ENST00000398557 5789 ntAPPRIS ALT2 TSL 5 BASIC16.67■□□□□ 0.26
HMGCLP35914 LDLRAP1-201ENST00000374338 2940 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
HMGCLP35914 ELMO3-203ENST00000477898 2281 ntAPPRIS ALT2 TSL 2 BASIC16.67■□□□□ 0.26
HMGCLP35914 AL731569.1-201ENST00000428940 3058 ntTSL 2 BASIC16.67■□□□□ 0.26
HMGCLP35914 TMC4-209ENST00000617472 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC16.67■□□□□ 0.26
HMGCLP35914 DUOXA2-201ENST00000323030 1760 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
HMGCLP35914 FGD5-201ENST00000285046 5720 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
HMGCLP35914 AIFM3-203ENST00000405089 2333 ntAPPRIS ALT1 TSL 2 BASIC16.67■□□□□ 0.26
HMGCLP35914 TPBG-203ENST00000543496 2881 ntAPPRIS P1 TSL 2 BASIC16.67■□□□□ 0.26
HMGCLP35914 FBXO4-201ENST00000281623 1682 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
HMGCLP35914 CPSF4-201ENST00000292476 1691 ntAPPRIS P3 TSL 1 (best) BASIC16.67■□□□□ 0.26
HMGCLP35914 ENOSF1-202ENST00000340116 1658 ntTSL 5 BASIC16.67■□□□□ 0.26
HMGCLP35914 MRGPRD-201ENST00000309106 966 ntAPPRIS P1 BASIC16.67■□□□□ 0.26
HMGCLP35914 IFNL1-201ENST00000333625 857 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
HMGCLP35914 HIST1H3D-201ENST00000356476 411 ntAPPRIS P1 BASIC16.67■□□□□ 0.26
HMGCLP35914 HMGN4-201ENST00000377575 1225 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
HMGCLP35914 ADARB2-201ENST00000381305 703 ntTSL 2 BASIC16.67■□□□□ 0.26
HMGCLP35914 PMP22-202ENST00000395936 816 ntTSL 3 BASIC16.67■□□□□ 0.26
HMGCLP35914 MOB1B-202ENST00000396051 1107 ntTSL 2 BASIC16.67■□□□□ 0.26
HMGCLP35914 FAM19A5-204ENST00000406880 833 ntTSL 3 BASIC16.67■□□□□ 0.26
HMGCLP35914 CCNL2-202ENST00000408918 1186 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
HMGCLP35914 C2orf49-202ENST00000410049 854 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
HMGCLP35914 AC023274.1-201ENST00000418278 595 ntBASIC16.67■□□□□ 0.26
HMGCLP35914 AC004832.2-201ENST00000426397 482 ntBASIC16.67■□□□□ 0.26
HMGCLP35914 C21orf33-205ENST00000427803 1077 ntTSL 2 BASIC16.67■□□□□ 0.26
HMGCLP35914 NICN1-204ENST00000436744 1271 ntTSL 2 BASIC16.67■□□□□ 0.26
HMGCLP35914 CCND3-213ENST00000510503 1257 ntTSL 3 BASIC16.67■□□□□ 0.26
HMGCLP35914 AC009567.1-201ENST00000515071 525 ntTSL 4 BASIC16.67■□□□□ 0.26
HMGCLP35914 AP002770.1-201ENST00000540547 428 ntTSL 4 BASIC16.67■□□□□ 0.26
HMGCLP35914 AL009183.1-201ENST00000603760 355 ntBASIC16.67■□□□□ 0.26
HMGCLP35914 GUCY1A2-202ENST00000347596 2532 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
HMGCLP35914 ASL-201ENST00000304874 2143 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
HMGCLP35914 DEF6-201ENST00000316637 2262 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
HMGCLP35914 VEPH1-218ENST00000494677 1714 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
HMGCLP35914 GMPR2-217ENST00000559104 1719 ntTSL 5 BASIC16.67■□□□□ 0.26
HMGCLP35914 ETV4-211ENST00000591713 1727 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
HMGCLP35914 NUP50-202ENST00000396096 1895 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
HMGCLP35914 CD72-204ENST00000396757 2035 ntAPPRIS P2 TSL 5 BASIC16.67■□□□□ 0.26
HMGCLP35914 FLT1-201ENST00000282397 7092 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
HMGCLP35914 AL512625.3-203ENST00000445604 1602 ntTSL 5 BASIC16.67■□□□□ 0.26
HMGCLP35914 PPEF2-207ENST00000621010 1797 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
Retrieved 100 of 98,524 protein–RNA pairs in 42.7 ms