Protein–RNA interactions for Protein: P35790

CHKA, Choline kinase alpha, humanhuman

Predictions only

Length 457 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHKAP35790 LY6K-205ENST00000522591 2724 ntAPPRIS ALT2 TSL 2 BASIC17.75■□□□□ 0.43
CHKAP35790 PRDM5-202ENST00000394435 2492 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
CHKAP35790 FAM153A-203ENST00000440605 1966 ntAPPRIS P2 TSL 1 (best) BASIC17.75■□□□□ 0.43
CHKAP35790 HIST1H2BN-204ENST00000612898 1723 ntAPPRIS P1 BASIC17.75■□□□□ 0.43
CHKAP35790 L1CAM-203ENST00000370055 4655 ntTSL 5 BASIC17.75■□□□□ 0.43
CHKAP35790 AL662844.4-201ENST00000606367 2838 ntBASIC17.75■□□□□ 0.43
CHKAP35790 PIGP-207ENST00000464265 3437 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
CHKAP35790 PIAS4-201ENST00000262971 3159 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
CHKAP35790 RAB23-202ENST00000468148 4837 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
CHKAP35790 CLN6-202ENST00000538696 1343 ntTSL 2 BASIC17.74■□□□□ 0.43
CHKAP35790 PKM-216ENST00000565184 2503 ntAPPRIS ALT1 TSL 1 (best) BASIC17.74■□□□□ 0.43
CHKAP35790 ATP10A-201ENST00000356865 6680 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
CHKAP35790 PPARD-202ENST00000337400 2041 ntTSL 5 BASIC17.74■□□□□ 0.43
CHKAP35790 SNRK-204ENST00000454177 2961 ntAPPRIS P1 TSL 2 BASIC17.74■□□□□ 0.43
CHKAP35790 KANK1-204ENST00000382293 5249 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
CHKAP35790 FMO5-208ENST00000578284 1784 ntTSL 5 BASIC17.74■□□□□ 0.43
CHKAP35790 AC226118.1-201ENST00000515213 2146 ntTSL 2 BASIC17.74■□□□□ 0.43
CHKAP35790 ACAT2-201ENST00000367048 3180 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
CHKAP35790 FBXL16-202ENST00000397621 3547 ntAPPRIS P1 TSL 5 BASIC17.74■□□□□ 0.43
CHKAP35790 GPBAR1-201ENST00000479077 1869 ntAPPRIS P1 TSL 2 BASIC17.74■□□□□ 0.43
CHKAP35790 MFSD1-202ENST00000392813 2244 ntTSL 2 BASIC17.74■□□□□ 0.43
CHKAP35790 SPG11-215ENST00000559193 2579 ntAPPRIS ALT2 TSL 1 (best) BASIC17.74■□□□□ 0.43
CHKAP35790 RPS6KA3-201ENST00000379565 7918 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
CHKAP35790 KRT23-201ENST00000209718 1987 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
CHKAP35790 DPEP1-203ENST00000421184 1647 ntAPPRIS P1 TSL 5 BASIC17.74■□□□□ 0.43
CHKAP35790 PAXX-201ENST00000371620 812 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
CHKAP35790 RFXANK-202ENST00000392324 1059 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
CHKAP35790 AP1S3-203ENST00000396654 830 ntAPPRIS P2 TSL 2 BASIC17.74■□□□□ 0.43
CHKAP35790 SCRN1-203ENST00000409570 535 ntTSL 4 BASIC17.74■□□□□ 0.43
CHKAP35790 AL031587.1-201ENST00000410099 1055 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
CHKAP35790 AL049612.1-201ENST00000427017 694 ntTSL 5 BASIC17.74■□□□□ 0.43
CHKAP35790 HYAL1-206ENST00000447605 666 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
CHKAP35790 CR559946.1-201ENST00000453835 531 ntTSL 4 BASIC17.74■□□□□ 0.43
CHKAP35790 PAX9-204ENST00000554201 1289 ntTSL 2 BASIC17.74■□□□□ 0.43
CHKAP35790 MIR3687-2-201ENST00000577708 61 ntBASIC17.74■□□□□ 0.43
CHKAP35790 ELOF1-204ENST00000587806 1172 ntTSL 2 BASIC17.74■□□□□ 0.43
CHKAP35790 SLC9A3-AS1-204ENST00000606288 791 ntTSL 2 BASIC17.74■□□□□ 0.43
CHKAP35790 MIR3687-1-201ENST00000614492 61 ntBASIC17.74■□□□□ 0.43
CHKAP35790 AC139530.3-201ENST00000620344 690 ntBASIC17.74■□□□□ 0.43
CHKAP35790 DAPK2-202ENST00000457488 1741 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
CHKAP35790 AC002310.6-201ENST00000624451 1377 ntBASIC17.74■□□□□ 0.43
CHKAP35790 FAM86DP-207ENST00000497543 2152 ntTSL 2 BASIC17.74■□□□□ 0.43
CHKAP35790 PPP3CA-203ENST00000394854 4685 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
CHKAP35790 VAV2-203ENST00000406606 4691 ntAPPRIS P2 TSL 1 (best) BASIC17.74■□□□□ 0.43
CHKAP35790 SESN1-204ENST00000436639 3509 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
CHKAP35790 KHNYN-202ENST00000553935 3359 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
CHKAP35790 RABEP1-202ENST00000537505 5365 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
CHKAP35790 ASAP3-212ENST00000618240 2226 ntTSL 5 BASIC17.74■□□□□ 0.43
CHKAP35790 ETV4-205ENST00000545954 1775 ntTSL 2 BASIC17.74■□□□□ 0.43
CHKAP35790 UNC5D-203ENST00000416672 3532 ntAPPRIS ALT2 TSL 5 BASIC17.73■□□□□ 0.43
CHKAP35790 PCDHA8-202ENST00000531613 5260 ntAPPRIS P2 TSL 1 (best) BASIC17.73■□□□□ 0.43
CHKAP35790 DENND6B-201ENST00000413817 4939 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
CHKAP35790 CHFR-203ENST00000432561 2648 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
CHKAP35790 BMPER-201ENST00000297161 5031 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
CHKAP35790 LCORL-203ENST00000382226 5009 ntAPPRIS P2 TSL 5 BASIC17.73■□□□□ 0.43
CHKAP35790 KLC1-206ENST00000389744 3250 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
CHKAP35790 TBC1D10B-201ENST00000409939 3350 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
CHKAP35790 PKLR-202ENST00000392414 2479 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
CHKAP35790 CELF3-201ENST00000290583 3246 ntAPPRIS P3 TSL 1 (best) BASIC17.73■□□□□ 0.43
CHKAP35790 GPR137-212ENST00000539851 1843 ntTSL 2 BASIC17.73■□□□□ 0.43
CHKAP35790 TRIM39-201ENST00000376656 3338 ntAPPRIS P4 TSL 2 BASIC17.73■□□□□ 0.43
CHKAP35790 SELENBP1-204ENST00000426705 1928 ntTSL 2 BASIC17.73■□□□□ 0.43
CHKAP35790 FCN2-201ENST00000291744 1057 ntAPPRIS P2 TSL 1 (best) BASIC17.73■□□□□ 0.43
CHKAP35790 CRADD-201ENST00000332896 1169 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
CHKAP35790 YBX2P1-201ENST00000394192 760 ntBASIC17.73■□□□□ 0.43
CHKAP35790 THAP7-202ENST00000399133 1144 ntAPPRIS P1 TSL 2 BASIC17.73■□□□□ 0.43
CHKAP35790 UPF3AP3-201ENST00000420996 769 ntBASIC17.73■□□□□ 0.43
CHKAP35790 ARPC4-203ENST00000433034 926 ntTSL 3 BASIC17.73■□□□□ 0.43
CHKAP35790 DDIT4-AS1-201ENST00000491934 847 ntTSL 5 BASIC17.73■□□□□ 0.43
CHKAP35790 AC105202.1-202ENST00000522060 834 ntTSL 3 BASIC17.73■□□□□ 0.43
CHKAP35790 AP000763.4-201ENST00000544674 752 ntTSL 5 BASIC17.73■□□□□ 0.43
CHKAP35790 KRT73-AS1-202ENST00000551089 563 ntTSL 4 BASIC17.73■□□□□ 0.43
CHKAP35790 AL137786.1-202ENST00000555496 789 ntTSL 5 BASIC17.73■□□□□ 0.43
CHKAP35790 AL662799.1-201ENST00000630418 496 ntTSL 5 BASIC17.73■□□□□ 0.43
CHKAP35790 LINC00612-201ENST00000538094 2213 ntTSL 2 BASIC17.73■□□□□ 0.43
CHKAP35790 TRIM9-201ENST00000298355 5284 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
CHKAP35790 CSK-210ENST00000567571 2443 ntAPPRIS P1 TSL 2 BASIC17.73■□□□□ 0.43
CHKAP35790 OTUD5-204ENST00000428668 1493 ntTSL 2 BASIC17.73■□□□□ 0.43
CHKAP35790 CHAT-205ENST00000395562 2528 ntAPPRIS ALT2 TSL 1 (best) BASIC17.73■□□□□ 0.43
CHKAP35790 TPST2-201ENST00000338754 5697 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
CHKAP35790 BRPF1-201ENST00000383829 4736 ntAPPRIS ALT1 TSL 1 (best) BASIC17.73■□□□□ 0.43
CHKAP35790 JRK-211ENST00000615982 2823 ntAPPRIS ALT2 TSL 1 (best) BASIC17.73■□□□□ 0.43
CHKAP35790 C18orf63-201ENST00000579455 5127 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
CHKAP35790 AC006449.5-201ENST00000610658 2098 ntBASIC17.73■□□□□ 0.43
CHKAP35790 SLC35E2B-204ENST00000614300 2156 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
CHKAP35790 PNKD-202ENST00000258362 2991 ntAPPRIS ALT2 TSL 1 (best) BASIC17.73■□□□□ 0.43
CHKAP35790 C21orf58-201ENST00000291691 2975 ntAPPRIS P3 TSL 2 BASIC17.73■□□□□ 0.43
CHKAP35790 ILF3-203ENST00000449870 6119 ntAPPRIS ALT2 TSL 1 (best) BASIC17.73■□□□□ 0.43
CHKAP35790 MBL1P-201ENST00000480805 1424 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
CHKAP35790 TSPYL5-201ENST00000322128 4491 ntAPPRIS P1 BASIC17.72■□□□□ 0.43
CHKAP35790 RASL11A-201ENST00000241463 1543 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
CHKAP35790 TBC1D10C-203ENST00000526387 1520 ntTSL 2 BASIC17.72■□□□□ 0.43
CHKAP35790 AL590627.1-201ENST00000626603 1910 ntTSL 2 BASIC17.72■□□□□ 0.43
CHKAP35790 CNGA3-205ENST00000436404 2504 ntAPPRIS ALT2 TSL 1 (best) BASIC17.72■□□□□ 0.43
CHKAP35790 ZBTB9-201ENST00000395064 2716 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
CHKAP35790 PABPC4-203ENST00000372858 2753 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
CHKAP35790 SPINT1-202ENST00000562057 2456 ntAPPRIS ALT2 TSL 1 (best) BASIC17.72■□□□□ 0.43
CHKAP35790 RAB3IP-202ENST00000362025 2055 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
CHKAP35790 LAT2-201ENST00000275635 1869 ntAPPRIS P2 TSL 1 (best) BASIC17.72■□□□□ 0.43
CHKAP35790 POC1A-201ENST00000296484 1898 ntAPPRIS P3 TSL 1 (best) BASIC17.72■□□□□ 0.43
Retrieved 100 of 98,524 protein–RNA pairs in 32.3 ms