Protein–RNA interactions for Protein: P33552

CKS2, Cyclin-dependent kinases regulatory subunit 2, humanhuman

Predictions only

Length 79 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CKS2P33552 AC099063.4-201ENST00000641099 1602 ntBASIC12.4□□□□□ -0.42
CKS2P33552 FLI1-207ENST00000534087 3859 ntTSL 2 BASIC12.4□□□□□ -0.42
CKS2P33552 MRI1-202ENST00000319545 3027 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
CKS2P33552 MFSD14B-201ENST00000375344 3420 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
CKS2P33552 SLC5A7-202ENST00000409059 2032 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
CKS2P33552 ULBP2-201ENST00000367351 1349 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
CKS2P33552 VLDLR-AS1-205ENST00000599229 1346 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
CKS2P33552 CD68-201ENST00000250092 1878 ntAPPRIS P3 TSL 1 (best) BASIC12.4□□□□□ -0.42
CKS2P33552 LANCL2-201ENST00000254770 4353 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
CKS2P33552 FTSJ1-202ENST00000348411 1892 ntAPPRIS P4 TSL 1 (best) BASIC12.4□□□□□ -0.42
CKS2P33552 ZNF408-201ENST00000311764 2442 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
CKS2P33552 GCK-202ENST00000345378 2421 ntTSL 2 BASIC12.4□□□□□ -0.42
CKS2P33552 PTPRO-201ENST00000281171 5301 ntAPPRIS P3 TSL 1 (best) BASIC12.4□□□□□ -0.42
CKS2P33552 ANGPTL4-202ENST00000393962 1705 ntTSL 5 BASIC12.4□□□□□ -0.42
CKS2P33552 RFK-201ENST00000376736 2684 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
CKS2P33552 GEM-202ENST00000396194 2103 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
CKS2P33552 ARPC1B-201ENST00000252725 1551 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
CKS2P33552 HAUS8-201ENST00000253669 1568 ntAPPRIS P3 TSL 1 (best) BASIC12.4□□□□□ -0.42
CKS2P33552 ABTB1-202ENST00000453791 1961 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
CKS2P33552 XPO6-201ENST00000304658 4422 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
CKS2P33552 STEAP2-201ENST00000287908 6873 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
CKS2P33552 ASNS-201ENST00000175506 2356 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
CKS2P33552 P2RY6-207ENST00000538328 1425 ntAPPRIS P1 TSL 3 BASIC12.4□□□□□ -0.42
CKS2P33552 SIX6-201ENST00000327720 2787 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
CKS2P33552 TRIM13-204ENST00000420995 2607 ntAPPRIS P3 TSL 1 (best) BASIC12.4□□□□□ -0.42
CKS2P33552 ENSA-206ENST00000361631 725 ntTSL 2 BASIC12.4□□□□□ -0.42
CKS2P33552 FUOM-203ENST00000368552 762 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
CKS2P33552 FAM26F-202ENST00000368605 1117 ntAPPRIS P1 TSL 5 BASIC12.4□□□□□ -0.42
CKS2P33552 COX5BP2-201ENST00000392354 334 ntBASIC12.4□□□□□ -0.42
CKS2P33552 AC007405.3-201ENST00000429172 561 ntTSL 3 BASIC12.4□□□□□ -0.42
CKS2P33552 AC007563.2-201ENST00000447289 552 ntTSL 5 BASIC12.4□□□□□ -0.42
CKS2P33552 AC109462.3-201ENST00000573934 613 ntBASIC12.4□□□□□ -0.42
CKS2P33552 TK1-205ENST00000590862 642 ntTSL 3 BASIC12.4□□□□□ -0.42
CKS2P33552 GXYLT1P4-201ENST00000613576 1192 ntBASIC12.4□□□□□ -0.42
CKS2P33552 AC004263.2-201ENST00000617183 678 ntBASIC12.4□□□□□ -0.42
CKS2P33552 TBCB-214ENST00000629269 413 ntTSL 5 BASIC12.4□□□□□ -0.42
CKS2P33552 C12orf65-201ENST00000253233 2073 ntAPPRIS P2 TSL 1 (best) BASIC12.4□□□□□ -0.42
CKS2P33552 B3GAT1-201ENST00000312527 3652 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
CKS2P33552 OSGIN1-203ENST00000393306 1940 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
CKS2P33552 PRMT5-203ENST00000397440 1907 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
CKS2P33552 COL26A1-203ENST00000613501 2970 ntAPPRIS ALT2 TSL 1 (best) BASIC12.4□□□□□ -0.42
CKS2P33552 NFE2-202ENST00000435572 1762 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
CKS2P33552 ANAPC11-211ENST00000575195 1361 ntAPPRIS P1 TSL 2 BASIC12.4□□□□□ -0.42
CKS2P33552 CCDC68-204ENST00000591504 4132 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
CKS2P33552 MMP2-201ENST00000219070 3741 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
CKS2P33552 USP25-201ENST00000285679 3973 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
CKS2P33552 PLAUR-201ENST00000221264 1610 ntAPPRIS ALT2 TSL 1 (best) BASIC12.4□□□□□ -0.42
CKS2P33552 CLEC18B-201ENST00000339953 1865 ntAPPRIS P2 TSL 1 (best) BASIC12.4□□□□□ -0.42
CKS2P33552 ACTL8-201ENST00000375406 1861 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
CKS2P33552 CLEC18C-202ENST00000536907 1865 ntAPPRIS ALT2 TSL 5 BASIC12.4□□□□□ -0.42
CKS2P33552 STBD1-201ENST00000237642 3420 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
CKS2P33552 POM121C-206ENST00000607367 3690 ntAPPRIS ALT2 TSL 5 BASIC12.4□□□□□ -0.43
CKS2P33552 SBF1-202ENST00000380817 8008 ntAPPRIS P2 TSL 1 (best) BASIC12.4□□□□□ -0.43
CKS2P33552 ASIC3-201ENST00000297512 1718 ntTSL 1 (best) BASIC12.4□□□□□ -0.43
CKS2P33552 C15orf59-204ENST00000569673 6573 ntAPPRIS P1 TSL 5 BASIC12.4□□□□□ -0.43
CKS2P33552 CCDC40-201ENST00000269318 1970 ntTSL 2 BASIC12.39□□□□□ -0.43
CKS2P33552 HNRNPDL-208ENST00000621267 4139 ntAPPRIS P2 TSL 1 (best) BASIC12.39□□□□□ -0.43
CKS2P33552 WIPI1-202ENST00000546360 1575 ntTSL 2 BASIC12.39□□□□□ -0.43
CKS2P33552 POLR2A-201ENST00000572844 2083 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
CKS2P33552 EIF2S2-201ENST00000374980 2656 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
CKS2P33552 SLC6A9-204ENST00000372307 2162 ntTSL 2 BASIC12.39□□□□□ -0.43
CKS2P33552 IGSF8-205ENST00000614243 2191 ntAPPRIS P2 TSL 1 (best) BASIC12.39□□□□□ -0.43
CKS2P33552 CDK1-204ENST00000448257 1948 ntAPPRIS ALT1 TSL 1 (best) BASIC12.39□□□□□ -0.43
CKS2P33552 FRMD3-201ENST00000304195 5297 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
CKS2P33552 TGIF1-205ENST00000401449 1670 ntTSL 2 BASIC12.39□□□□□ -0.43
CKS2P33552 AUTS2-218ENST00000615871 4511 ntTSL 5 BASIC12.39□□□□□ -0.43
CKS2P33552 CLEC10A-204ENST00000571664 1442 ntAPPRIS ALT2 TSL 1 (best) BASIC12.39□□□□□ -0.43
CKS2P33552 AC097374.1-201ENST00000568768 6624 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
CKS2P33552 TMEM181-201ENST00000367090 5390 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
CKS2P33552 GLUL-202ENST00000331872 4364 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
CKS2P33552 ANXA11-203ENST00000422982 2534 ntAPPRIS P3 TSL 1 (best) BASIC12.39□□□□□ -0.43
CKS2P33552 ENDOV-212ENST00000520284 2500 ntTSL 2 BASIC12.39□□□□□ -0.43
CKS2P33552 CARNMT1-202ENST00000376834 4130 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
CKS2P33552 AIFM1-201ENST00000287295 2260 ntAPPRIS P4 TSL 1 (best) BASIC12.39□□□□□ -0.43
CKS2P33552 SLC26A1-202ENST00000398516 3109 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
CKS2P33552 ELANE-201ENST00000263621 920 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
CKS2P33552 MBD1-202ENST00000269471 2980 ntAPPRIS ALT2 TSL 5 BASIC12.39□□□□□ -0.43
CKS2P33552 HBA1-201ENST00000320868 577 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
CKS2P33552 TNNI3-201ENST00000344887 840 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
CKS2P33552 DAB1-202ENST00000371230 1150 ntTSL 5 BASIC12.39□□□□□ -0.43
CKS2P33552 DDT-202ENST00000398344 713 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
CKS2P33552 DDT-203ENST00000403754 569 ntTSL 3 BASIC12.39□□□□□ -0.43
CKS2P33552 DDT-206ENST00000430101 573 ntTSL 2 BASIC12.39□□□□□ -0.43
CKS2P33552 USHBP1-203ENST00000431146 2136 ntTSL 2 BASIC12.39□□□□□ -0.43
CKS2P33552 WDR86-AS1-203ENST00000480632 704 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
CKS2P33552 MYD88-211ENST00000495303 976 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
CKS2P33552 SLC39A13-212ENST00000531974 856 ntTSL 2 BASIC12.39□□□□□ -0.43
CKS2P33552 AL512604.3-201ENST00000569583 964 ntBASIC12.39□□□□□ -0.43
CKS2P33552 BCL2L12-208ENST00000600947 633 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
CKS2P33552 AP001412.1-201ENST00000608405 714 ntBASIC12.39□□□□□ -0.43
CKS2P33552 TRAPPC6A-201ENST00000006275 805 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
CKS2P33552 SIL1-201ENST00000265195 1895 ntAPPRIS P1 TSL 5 BASIC12.39□□□□□ -0.43
CKS2P33552 ZNF618-201ENST00000288466 9109 ntAPPRIS P3 TSL 2 BASIC12.39□□□□□ -0.43
CKS2P33552 GGT6-204ENST00000574154 2482 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
CKS2P33552 LINGO1-201ENST00000355300 3055 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
CKS2P33552 IFIH1-202ENST00000421365 1617 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
CKS2P33552 P2RX5-209ENST00000552276 1642 ntAPPRIS ALT2 TSL 5 BASIC12.39□□□□□ -0.43
CKS2P33552 ATXN2L-202ENST00000336783 4367 ntAPPRIS ALT2 TSL 1 (best) BASIC12.39□□□□□ -0.43
CKS2P33552 IGDCC3-201ENST00000327987 4479 ntAPPRIS P2 TSL 1 (best) BASIC12.39□□□□□ -0.43
CKS2P33552 CALCR-207ENST00000426151 1741 ntAPPRIS P3 TSL 1 (best) BASIC12.39□□□□□ -0.43
Retrieved 100 of 98,524 protein–RNA pairs in 28.9 ms