Protein–RNA interactions for Protein: P31645

SLC6A4, Sodium-dependent serotonin transporter, humanhuman

Predictions only

Length 630 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC6A4P31645 SDCBP-202ENST00000413219 2086 ntAPPRIS P3 TSL 2 BASIC17.18■□□□□ 0.34
SLC6A4P31645 C17orf62-203ENST00000434650 2050 ntTSL 2 BASIC17.18■□□□□ 0.34
SLC6A4P31645 ZNF470-201ENST00000330619 7151 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
SLC6A4P31645 ROPN1L-201ENST00000274134 1066 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
SLC6A4P31645 MRGPRD-201ENST00000309106 966 ntAPPRIS P1 BASIC17.18■□□□□ 0.34
SLC6A4P31645 FAM24B-201ENST00000368896 704 ntAPPRIS P1 TSL 2 BASIC17.18■□□□□ 0.34
SLC6A4P31645 CD99-202ENST00000381180 530 ntTSL 2 BASIC17.18■□□□□ 0.34
SLC6A4P31645 IZUMO4-201ENST00000395296 869 ntTSL 2 BASIC17.18■□□□□ 0.34
SLC6A4P31645 GGCT-205ENST00000409436 954 ntTSL 3 BASIC17.18■□□□□ 0.34
SLC6A4P31645 SPCS2P4-201ENST00000436160 681 ntBASIC17.18■□□□□ 0.34
SLC6A4P31645 MEIS1-AS2-201ENST00000439433 690 ntTSL 2 BASIC17.18■□□□□ 0.34
SLC6A4P31645 AL391069.2-202ENST00000447795 622 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
SLC6A4P31645 AC018730.1-201ENST00000454183 327 ntTSL 3 BASIC17.18■□□□□ 0.34
SLC6A4P31645 RN7SL589P-201ENST00000481268 310 ntBASIC17.18■□□□□ 0.34
SLC6A4P31645 AP002490.2-201ENST00000524791 560 ntBASIC17.18■□□□□ 0.34
SLC6A4P31645 TMEM88-202ENST00000574668 510 ntTSL 2 BASIC17.18■□□□□ 0.34
SLC6A4P31645 AC005330.1-201ENST00000590086 1238 ntTSL 5 BASIC17.18■□□□□ 0.34
SLC6A4P31645 AC021097.1-201ENST00000607902 574 ntBASIC17.18■□□□□ 0.34
SLC6A4P31645 EPN2-203ENST00000395618 2216 ntTSL 2 BASIC17.18■□□□□ 0.34
SLC6A4P31645 FAM49B-202ENST00000517654 1817 ntAPPRIS P1 TSL 5 BASIC17.18■□□□□ 0.34
SLC6A4P31645 AC010478.1-202ENST00000559112 2367 ntTSL 2 BASIC17.18■□□□□ 0.34
SLC6A4P31645 RNF169-201ENST00000299563 7823 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
SLC6A4P31645 AC078925.2-201ENST00000624013 1973 ntBASIC17.18■□□□□ 0.34
SLC6A4P31645 SLC35G1-202ENST00000427197 2402 ntAPPRIS ALT2 TSL 1 (best) BASIC17.18■□□□□ 0.34
SLC6A4P31645 SFTPB-202ENST00000409383 1867 ntAPPRIS P2 TSL 1 (best) BASIC17.18■□□□□ 0.34
SLC6A4P31645 NSL1-203ENST00000366978 1344 ntTSL 2 BASIC17.18■□□□□ 0.34
SLC6A4P31645 ZDHHC4-206ENST00000405731 1348 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
SLC6A4P31645 BSG-215ENST00000618006 1329 ntTSL 2 BASIC17.18■□□□□ 0.34
SLC6A4P31645 SLC41A3-203ENST00000360370 2169 ntAPPRIS ALT2 TSL 1 (best) BASIC17.18■□□□□ 0.34
SLC6A4P31645 ARHGAP9-204ENST00000430041 2323 ntAPPRIS ALT2 TSL 1 (best) BASIC17.18■□□□□ 0.34
SLC6A4P31645 RNF222-201ENST00000344001 2786 ntAPPRIS P1 BASIC17.17■□□□□ 0.34
SLC6A4P31645 TMEM110-201ENST00000355083 4769 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
SLC6A4P31645 GOLGA6L17P-202ENST00000614358 1398 ntBASIC17.17■□□□□ 0.34
SLC6A4P31645 KLHDC7B-201ENST00000395676 2991 ntAPPRIS P1 BASIC17.17■□□□□ 0.34
SLC6A4P31645 KCNC4-204ENST00000438661 2953 ntAPPRIS ALT2 TSL 1 (best) BASIC17.17■□□□□ 0.34
SLC6A4P31645 CCDC28A-202ENST00000611852 1505 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
SLC6A4P31645 TEX261-201ENST00000272438 3441 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
SLC6A4P31645 ZNF74-202ENST00000400451 3159 ntAPPRIS P2 TSL 1 (best) BASIC17.17■□□□□ 0.34
SLC6A4P31645 PTP4A3-201ENST00000329397 2785 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
SLC6A4P31645 SLC22A12-201ENST00000336464 1854 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
SLC6A4P31645 SPATC1-201ENST00000377470 2007 ntAPPRIS P3 TSL 1 (best) BASIC17.17■□□□□ 0.34
SLC6A4P31645 AL022341.1-201ENST00000455294 389 ntTSL 2 BASIC17.17■□□□□ 0.34
SLC6A4P31645 NDUFB2-202ENST00000460088 420 ntTSL 3 BASIC17.17■□□□□ 0.34
SLC6A4P31645 AC119403.1-201ENST00000520090 776 ntTSL 5 BASIC17.17■□□□□ 0.34
SLC6A4P31645 NEK3-206ENST00000611833 2345 ntAPPRIS ALT2 TSL 5 BASIC17.17■□□□□ 0.34
SLC6A4P31645 AL512652.2-201ENST00000625156 1716 ntBASIC17.17■□□□□ 0.34
SLC6A4P31645 BATF2-202ENST00000435842 1949 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
SLC6A4P31645 HLA-F-216ENST00000259951 1635 ntAPPRIS P4 BASIC17.17■□□□□ 0.34
SLC6A4P31645 CKMT2-202ENST00000424301 1637 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
SLC6A4P31645 KRT18P28-201ENST00000453838 1332 ntBASIC17.17■□□□□ 0.34
SLC6A4P31645 ALDH5A1-202ENST00000357578 5248 ntAPPRIS ALT2 TSL 1 (best) BASIC17.17■□□□□ 0.34
SLC6A4P31645 ISM1-201ENST00000262487 2593 ntAPPRIS P1 TSL 5 BASIC17.17■□□□□ 0.34
SLC6A4P31645 TRPV4-205ENST00000537083 2436 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
SLC6A4P31645 PNPO-201ENST00000225573 2256 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
SLC6A4P31645 DEF6-201ENST00000316637 2262 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
SLC6A4P31645 LTB4R2-202ENST00000528054 3092 ntBASIC17.17■□□□□ 0.34
SLC6A4P31645 PCBP3-204ENST00000400309 1986 ntAPPRIS ALT2 TSL 5 BASIC17.17■□□□□ 0.34
SLC6A4P31645 PTGDR-201ENST00000306051 2942 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
SLC6A4P31645 NSMF-204ENST00000371473 3556 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
SLC6A4P31645 OSBPL1A-204ENST00000399443 3317 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
SLC6A4P31645 AMT-206ENST00000458307 1860 ntTSL 2 BASIC17.16■□□□□ 0.34
SLC6A4P31645 APH1A-202ENST00000360244 2353 ntAPPRIS ALT1 TSL 1 (best) BASIC17.16■□□□□ 0.34
SLC6A4P31645 ACOT12-201ENST00000307624 2086 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
SLC6A4P31645 SEPHS2-201ENST00000478753 2551 ntAPPRIS P1 BASIC17.16■□□□□ 0.34
SLC6A4P31645 OLA1-201ENST00000284719 4417 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
SLC6A4P31645 FUT5-201ENST00000252675 1916 ntAPPRIS P1 BASIC17.16■□□□□ 0.34
SLC6A4P31645 KLHDC3-202ENST00000326974 1909 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
SLC6A4P31645 HYAL3-201ENST00000336307 1942 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
SLC6A4P31645 MOCS1-206ENST00000425303 1920 ntTSL 2 BASIC17.16■□□□□ 0.34
SLC6A4P31645 RGS3-210ENST00000462143 2759 ntTSL 2 BASIC17.16■□□□□ 0.34
SLC6A4P31645 EIF3L-202ENST00000406934 2282 ntTSL 2 BASIC17.16■□□□□ 0.34
SLC6A4P31645 AC020916.1-201ENST00000587762 1774 ntBASIC17.16■□□□□ 0.34
SLC6A4P31645 CTRB2-201ENST00000303037 901 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
SLC6A4P31645 YIF1B-201ENST00000329420 964 ntTSL 3 BASIC17.16■□□□□ 0.34
SLC6A4P31645 METTL26-202ENST00000338401 544 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
SLC6A4P31645 CGB3-201ENST00000357383 877 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
SLC6A4P31645 CGB2-201ENST00000359342 627 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
SLC6A4P31645 AL139400.1-201ENST00000366220 510 ntBASIC17.16■□□□□ 0.34
SLC6A4P31645 TNNC2-202ENST00000372557 780 ntTSL 3 BASIC17.16■□□□□ 0.34
SLC6A4P31645 FBXO44-205ENST00000376768 959 ntTSL 2 BASIC17.16■□□□□ 0.34
SLC6A4P31645 LGMN-202ENST00000393218 2115 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
SLC6A4P31645 CYB5A-203ENST00000397914 619 ntTSL 3 BASIC17.16■□□□□ 0.34
SLC6A4P31645 AL627223.1-201ENST00000416693 442 ntBASIC17.16■□□□□ 0.34
SLC6A4P31645 METTL21AP1-201ENST00000438852 635 ntBASIC17.16■□□□□ 0.34
SLC6A4P31645 AL592309.1-201ENST00000443127 649 ntBASIC17.16■□□□□ 0.34
SLC6A4P31645 AL355140.1-201ENST00000457328 398 ntTSL 5 BASIC17.16■□□□□ 0.34
SLC6A4P31645 AC069335.1-201ENST00000489972 472 ntBASIC17.16■□□□□ 0.34
SLC6A4P31645 AC103736.1-203ENST00000524565 872 ntTSL 3 BASIC17.16■□□□□ 0.34
SLC6A4P31645 RNF34-208ENST00000555076 593 ntTSL 3 BASIC17.16■□□□□ 0.34
SLC6A4P31645 AC090515.4-201ENST00000558042 450 ntTSL 3 BASIC17.16■□□□□ 0.34
SLC6A4P31645 LINC01225-203ENST00000563550 1244 ntBASIC17.16■□□□□ 0.34
SLC6A4P31645 AL139011.1-202ENST00000642063 584 ntBASIC17.16■□□□□ 0.34
SLC6A4P31645 TLE3-205ENST00000539550 2464 ntTSL 2 BASIC17.16■□□□□ 0.34
SLC6A4P31645 EDA-204ENST00000374553 5272 ntAPPRIS ALT1 TSL 1 (best) BASIC17.16■□□□□ 0.34
SLC6A4P31645 SPAG1-201ENST00000251809 3748 ntAPPRIS P1 TSL 5 BASIC17.16■□□□□ 0.34
SLC6A4P31645 CRTC3-201ENST00000268184 2537 ntAPPRIS P3 TSL 1 (best) BASIC17.16■□□□□ 0.34
SLC6A4P31645 ACBD3-201ENST00000366812 3573 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
SLC6A4P31645 CCDC120-203ENST00000536628 2381 ntAPPRIS ALT2 TSL 2 BASIC17.16■□□□□ 0.34
SLC6A4P31645 KCNQ2-202ENST00000344462 2750 ntAPPRIS ALT2 TSL 1 (best) BASIC17.16■□□□□ 0.34
SLC6A4P31645 OSR2-209ENST00000522510 1528 ntAPPRIS P1 TSL 2 BASIC17.16■□□□□ 0.34
Retrieved 100 of 98,524 protein–RNA pairs in 56.4 ms