Protein–RNA interactions for Protein: P28566

HTR1E, 5-hydroxytryptamine receptor 1E, humanhuman

Predictions only

Length 365 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HTR1EP28566 DIRC2-201ENST00000261038 3596 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
HTR1EP28566 SYT6-205ENST00000609117 4424 ntTSL 5 BASIC16.13■□□□□ 0.17
HTR1EP28566 NAA50-201ENST00000240922 6135 ntAPPRIS P3 TSL 1 (best) BASIC16.13■□□□□ 0.17
HTR1EP28566 AC009336.1-201ENST00000608941 1553 ntBASIC16.13■□□□□ 0.17
HTR1EP28566 GALE-216ENST00000617979 1566 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
HTR1EP28566 ASB16-AS1-201ENST00000585457 2213 ntTSL 2 BASIC16.13■□□□□ 0.17
HTR1EP28566 AKT1-214ENST00000555528 3066 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
HTR1EP28566 RAI2-203ENST00000415486 2037 ntTSL 2 BASIC16.12■□□□□ 0.17
HTR1EP28566 ARVCF-204ENST00000406522 2682 ntTSL 5 BASIC16.12■□□□□ 0.17
HTR1EP28566 ADAM23-201ENST00000264377 6330 ntAPPRIS P2 TSL 1 (best) BASIC16.12■□□□□ 0.17
HTR1EP28566 HS6ST2-203ENST00000406696 1818 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
HTR1EP28566 NFASC-205ENST00000403080 2462 ntTSL 2 BASIC16.12■□□□□ 0.17
HTR1EP28566 LGR6-205ENST00000439764 2487 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
HTR1EP28566 TAF3-201ENST00000344293 4872 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
HTR1EP28566 TNIP1-202ENST00000389378 2935 ntAPPRIS ALT2 TSL 2 BASIC16.12■□□□□ 0.17
HTR1EP28566 NFATC4-211ENST00000554344 2955 ntAPPRIS ALT2 TSL 1 (best) BASIC16.12■□□□□ 0.17
HTR1EP28566 NGFR-201ENST00000172229 3417 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
HTR1EP28566 SOWAHB-201ENST00000334306 3220 ntAPPRIS P1 BASIC16.12■□□□□ 0.17
HTR1EP28566 LRRC61-201ENST00000323078 1684 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
HTR1EP28566 GFM1-208ENST00000478576 2147 ntTSL 2 BASIC16.12■□□□□ 0.17
HTR1EP28566 KCNA5-201ENST00000252321 2800 ntAPPRIS P1 BASIC16.12■□□□□ 0.17
HTR1EP28566 AL353593.2-201ENST00000602529 1483 ntBASIC16.12■□□□□ 0.17
HTR1EP28566 FAM49B-223ENST00000522746 2196 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
HTR1EP28566 ANKRD37-201ENST00000335174 1141 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
HTR1EP28566 EIF6-202ENST00000374443 1017 ntTSL 5 BASIC16.12■□□□□ 0.17
HTR1EP28566 HIST2H3DP1-201ENST00000401004 416 ntBASIC16.12■□□□□ 0.17
HTR1EP28566 TM4SF19-TCTEX1D2-201ENST00000442633 964 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
HTR1EP28566 AC073648.2-201ENST00000510116 352 ntBASIC16.12■□□□□ 0.17
HTR1EP28566 AC096582.2-201ENST00000510860 516 ntBASIC16.12■□□□□ 0.17
HTR1EP28566 JPH4-203ENST00000544177 1124 ntTSL 2 BASIC16.12■□□□□ 0.17
HTR1EP28566 LITAF-211ENST00000572255 516 ntTSL 4 BASIC16.12■□□□□ 0.17
HTR1EP28566 LITAF-215ENST00000574763 717 ntAPPRIS P1 TSL 3 BASIC16.12■□□□□ 0.17
HTR1EP28566 CIRBP-235ENST00000591935 746 ntAPPRIS ALT1 TSL 3 BASIC16.12■□□□□ 0.17
HTR1EP28566 AC012615.5-201ENST00000592720 581 ntTSL 4 BASIC16.12■□□□□ 0.17
HTR1EP28566 BNIP3P18-201ENST00000593976 575 ntBASIC16.12■□□□□ 0.17
HTR1EP28566 PRKN-208ENST00000610470 531 ntTSL 2 BASIC16.12■□□□□ 0.17
HTR1EP28566 PRKN-209ENST00000612485 225 ntTSL 5 BASIC16.12■□□□□ 0.17
HTR1EP28566 RUSC1-203ENST00000368349 1968 ntAPPRIS P3 TSL 1 (best) BASIC16.12■□□□□ 0.17
HTR1EP28566 HTR1A-201ENST00000323865 1778 ntAPPRIS P1 BASIC16.12■□□□□ 0.17
HTR1EP28566 B3GNT4-206ENST00000546192 2749 ntAPPRIS P1 TSL 2 BASIC16.12■□□□□ 0.17
HTR1EP28566 RDH10-201ENST00000240285 3949 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
HTR1EP28566 ZNF84-208ENST00000539354 3237 ntAPPRIS P2 TSL 1 (best) BASIC16.12■□□□□ 0.17
HTR1EP28566 COLEC11-206ENST00000403096 1557 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
HTR1EP28566 CHD1L-203ENST00000369259 2358 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
HTR1EP28566 VOPP1-207ENST00000428648 2866 ntTSL 2 BASIC16.12■□□□□ 0.17
HTR1EP28566 AMT-206ENST00000458307 1860 ntTSL 2 BASIC16.12■□□□□ 0.17
HTR1EP28566 TSC2-222ENST00000568454 5434 ntAPPRIS ALT2 TSL 2 BASIC16.12■□□□□ 0.17
HTR1EP28566 TLCD2-201ENST00000330676 5971 ntAPPRIS P1 TSL 2 BASIC16.12■□□□□ 0.17
HTR1EP28566 AL596257.1-201ENST00000641463 2694 ntBASIC16.12■□□□□ 0.17
HTR1EP28566 NR2C2-201ENST00000323373 2406 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
HTR1EP28566 WDR1-205ENST00000502702 1691 ntTSL 5 BASIC16.11■□□□□ 0.17
HTR1EP28566 TEX264-209ENST00000457573 1448 ntAPPRIS P3 TSL 5 BASIC16.11■□□□□ 0.17
HTR1EP28566 SMN1-204ENST00000506163 1445 ntAPPRIS ALT2 TSL 1 (best) BASIC16.11■□□□□ 0.17
HTR1EP28566 KLHDC8B-201ENST00000332780 1959 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
HTR1EP28566 ME2P1-201ENST00000426028 1970 ntBASIC16.11■□□□□ 0.17
HTR1EP28566 CTSD-213ENST00000637915 1982 ntAPPRIS ALT2 TSL 5 BASIC16.11■□□□□ 0.17
HTR1EP28566 PCDHA13-202ENST00000409494 4884 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
HTR1EP28566 DENND3-201ENST00000262585 5438 ntAPPRIS P2 TSL 5 BASIC16.11■□□□□ 0.17
HTR1EP28566 CLDN6-202ENST00000396925 1739 ntAPPRIS P1 TSL 5 BASIC16.11■□□□□ 0.17
HTR1EP28566 ZNF397-204ENST00000585800 2046 ntTSL 5 BASIC16.11■□□□□ 0.17
HTR1EP28566 CERS6-201ENST00000305747 7217 ntAPPRIS P3 TSL 2 BASIC16.11■□□□□ 0.17
HTR1EP28566 MGME1-201ENST00000377704 1781 ntTSL 3 BASIC16.11■□□□□ 0.17
HTR1EP28566 NEUROD1-201ENST00000295108 2852 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
HTR1EP28566 TVP23B-201ENST00000307767 2064 ntAPPRIS P2 TSL 1 (best) BASIC16.11■□□□□ 0.17
HTR1EP28566 DPF3-204ENST00000546183 1514 ntTSL 2 BASIC16.11■□□□□ 0.17
HTR1EP28566 CDIPT-209ENST00000569956 1532 ntAPPRIS P1 TSL 5 BASIC16.11■□□□□ 0.17
HTR1EP28566 EFNB3-201ENST00000226091 3222 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
HTR1EP28566 GNMT-201ENST00000372808 1072 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
HTR1EP28566 C1QC-203ENST00000374640 1163 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
HTR1EP28566 GLIPR1L1-202ENST00000378695 885 ntAPPRIS ALT2 TSL 1 (best) BASIC16.11■□□□□ 0.17
HTR1EP28566 ODF3B-202ENST00000401779 869 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
HTR1EP28566 ODF3B-203ENST00000403326 643 ntTSL 3 BASIC16.11■□□□□ 0.17
HTR1EP28566 CHMP3-203ENST00000409225 1099 ntTSL 2 BASIC16.11■□□□□ 0.17
HTR1EP28566 RFX3-AS1-201ENST00000423112 552 ntTSL 3 BASIC16.11■□□□□ 0.17
HTR1EP28566 ODF3B-205ENST00000428989 762 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
HTR1EP28566 THAP5-204ENST00000438865 868 ntTSL 2 BASIC16.11■□□□□ 0.17
HTR1EP28566 AC132008.2-207ENST00000454517 770 ntBASIC16.11■□□□□ 0.17
HTR1EP28566 STK19B-204ENST00000512515 211 ntBASIC16.11■□□□□ 0.17
HTR1EP28566 RPL18-208ENST00000549920 1004 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
HTR1EP28566 RPL18-209ENST00000550645 463 ntTSL 5 BASIC16.11■□□□□ 0.17
HTR1EP28566 RPL18-214ENST00000552588 559 ntTSL 3 BASIC16.11■□□□□ 0.17
HTR1EP28566 ZPBP2-204ENST00000584588 1277 ntTSL 5 BASIC16.11■□□□□ 0.17
HTR1EP28566 AC243547.2-201ENST00000616257 234 ntTSL 3 BASIC16.11■□□□□ 0.17
HTR1EP28566 BCS1L-202ENST00000392109 1583 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
HTR1EP28566 BCS1L-204ENST00000392111 1584 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
HTR1EP28566 AC006538.1-201ENST00000567905 1585 ntBASIC16.11■□□□□ 0.17
HTR1EP28566 FTSJ1-202ENST00000348411 1892 ntAPPRIS P4 TSL 1 (best) BASIC16.11■□□□□ 0.17
HTR1EP28566 KLHL36-204ENST00000564996 2173 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
HTR1EP28566 TAP2-202ENST00000374899 2497 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
HTR1EP28566 AC068944.1-201ENST00000514855 1604 ntTSL 2 BASIC16.11■□□□□ 0.17
HTR1EP28566 ARHGEF25-202ENST00000333972 2246 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
HTR1EP28566 ZNF500-201ENST00000219478 5880 ntAPPRIS P1 TSL 2 BASIC16.11■□□□□ 0.17
HTR1EP28566 ARHGAP11A-201ENST00000361627 5898 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
HTR1EP28566 LTBR-201ENST00000228918 2260 ntAPPRIS P3 TSL 1 (best) BASIC16.11■□□□□ 0.17
HTR1EP28566 TMPRSS13-203ENST00000524993 1950 ntAPPRIS P3 TSL 1 (best) BASIC16.11■□□□□ 0.17
HTR1EP28566 KCTD14-201ENST00000353172 1691 ntAPPRIS P3 TSL 1 (best) BASIC16.11■□□□□ 0.17
HTR1EP28566 IRF5-210ENST00000477535 1374 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
HTR1EP28566 ATP2C1-218ENST00000510168 5067 ntAPPRIS ALT1 TSL 5 BASIC16.11■□□□□ 0.17
HTR1EP28566 CHST14-201ENST00000306243 3574 ntAPPRIS P1 BASIC16.11■□□□□ 0.17
HTR1EP28566 MAP3K11-201ENST00000309100 3566 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Retrieved 100 of 98,524 protein–RNA pairs in 28.4 ms