Protein–RNA interactions for Protein: P26045

PTPN3, Tyrosine-protein phosphatase non-receptor type 3, humanhuman

Predictions only

Length 913 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN3P26045 PDE4C-201ENST00000262805 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC17.12■□□□□ 0.33
PTPN3P26045 FOXA1-201ENST00000250448 2862 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
PTPN3P26045 SGPP1-201ENST00000247225 3312 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
PTPN3P26045 FAM49B-223ENST00000522746 2196 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
PTPN3P26045 MAP3K20-203ENST00000409176 2572 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
PTPN3P26045 NAIF1-201ENST00000373078 3399 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
PTPN3P26045 AC110813.1-201ENST00000507934 2209 ntTSL 2 BASIC17.12■□□□□ 0.33
PTPN3P26045 KLC1-212ENST00000553286 3135 ntTSL 5 BASIC17.12■□□□□ 0.33
PTPN3P26045 ZRSR2-201ENST00000307771 1491 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
PTPN3P26045 PKD1L2-209ENST00000531391 1488 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
PTPN3P26045 NFIX-214ENST00000592199 1509 ntTSL 5 BASIC17.11■□□□□ 0.33
PTPN3P26045 AC073957.2-201ENST00000549241 1562 ntTSL 4 BASIC17.11■□□□□ 0.33
PTPN3P26045 ZFP3-201ENST00000318833 5206 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
PTPN3P26045 APOPT1-201ENST00000409074 2523 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
PTPN3P26045 NEK2-202ENST00000366999 2131 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
PTPN3P26045 MIER1-205ENST00000371014 1728 ntTSL 2 BASIC17.11■□□□□ 0.33
PTPN3P26045 ARID1A-205ENST00000457599 6268 ntAPPRIS ALT2 TSL 5 BASIC17.11■□□□□ 0.33
PTPN3P26045 MTERF2-201ENST00000240050 1790 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
PTPN3P26045 CHAD-203ENST00000508540 1789 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
PTPN3P26045 PPEF2-207ENST00000621010 1797 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
PTPN3P26045 TFF3-201ENST00000291525 407 ntAPPRIS ALT2 TSL 5 BASIC17.11■□□□□ 0.33
PTPN3P26045 MFSD13A-202ENST00000369931 823 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
PTPN3P26045 ZNF789-202ENST00000379724 510 ntTSL 2 BASIC17.11■□□□□ 0.33
PTPN3P26045 HUS1B-201ENST00000380907 1025 ntAPPRIS P1 BASIC17.11■□□□□ 0.33
PTPN3P26045 PLA2G16-203ENST00000415826 1099 ntAPPRIS P1 TSL 2 BASIC17.11■□□□□ 0.33
PTPN3P26045 SLC4A1APP2-201ENST00000424054 1259 ntBASIC17.11■□□□□ 0.33
PTPN3P26045 PRSS29P-201ENST00000440800 595 ntBASIC17.11■□□□□ 0.33
PTPN3P26045 AC009947.1-201ENST00000444350 727 ntBASIC17.11■□□□□ 0.33
PTPN3P26045 AC093909.1-201ENST00000504731 1122 ntBASIC17.11■□□□□ 0.33
PTPN3P26045 IGHV3-22-201ENST00000520721 359 ntBASIC17.11■□□□□ 0.33
PTPN3P26045 TRPC2-202ENST00000526541 1189 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
PTPN3P26045 AC087641.1-201ENST00000557561 1021 ntBASIC17.11■□□□□ 0.33
PTPN3P26045 MIR4751-201ENST00000578027 74 ntBASIC17.11■□□□□ 0.33
PTPN3P26045 ACTL9-202ENST00000612068 1252 ntBASIC17.11■□□□□ 0.33
PTPN3P26045 C1QL3-202ENST00000619991 783 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
PTPN3P26045 FOXP1-223ENST00000622151 429 ntTSL 3 BASIC17.11■□□□□ 0.33
PTPN3P26045 ACY1-212ENST00000635797 1294 ntTSL 5 BASIC17.11■□□□□ 0.33
PTPN3P26045 PLA2G16-206ENST00000639271 957 ntTSL 5 BASIC17.11■□□□□ 0.33
PTPN3P26045 NFATC4-222ENST00000555590 2830 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
PTPN3P26045 KNOP1-205ENST00000568230 1311 ntAPPRIS ALT2 TSL 5 BASIC17.11■□□□□ 0.33
PTPN3P26045 WT1-209ENST00000530998 2421 ntTSL 2 BASIC17.11■□□□□ 0.33
PTPN3P26045 CALB2-202ENST00000349553 1373 ntTSL 5 BASIC17.11■□□□□ 0.33
PTPN3P26045 GULP1-206ENST00000409830 1376 ntAPPRIS P3 TSL 1 (best) BASIC17.11■□□□□ 0.33
PTPN3P26045 ABTB1-201ENST00000232744 1965 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
PTPN3P26045 TCF3-212ENST00000588136 2658 ntAPPRIS ALT2 TSL 2 BASIC17.11■□□□□ 0.33
PTPN3P26045 CCDC189-204ENST00000541260 1531 ntTSL 5 BASIC17.11■□□□□ 0.33
PTPN3P26045 TLE3-212ENST00000558201 2766 ntTSL 5 BASIC17.11■□□□□ 0.33
PTPN3P26045 SEPT9-237ENST00000591198 2160 ntTSL 2 BASIC17.11■□□□□ 0.33
PTPN3P26045 MFSD1-202ENST00000392813 2244 ntTSL 2 BASIC17.11■□□□□ 0.33
PTPN3P26045 PANX2-201ENST00000159647 2964 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
PTPN3P26045 VEPH1-218ENST00000494677 1714 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
PTPN3P26045 SMCHD1-201ENST00000320876 8821 ntAPPRIS P1 TSL 5 BASIC17.1■□□□□ 0.33
PTPN3P26045 C16orf89-203ENST00000474471 1829 ntAPPRIS ALT2 TSL 5 BASIC17.1■□□□□ 0.33
PTPN3P26045 CCDC40-201ENST00000269318 1970 ntTSL 2 BASIC17.1■□□□□ 0.33
PTPN3P26045 CNPPD1-201ENST00000360507 2060 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
PTPN3P26045 CTSG-201ENST00000216336 886 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
PTPN3P26045 AP1S3-203ENST00000396654 830 ntAPPRIS P2 TSL 2 BASIC17.1■□□□□ 0.33
PTPN3P26045 PDE6D-202ENST00000409772 672 ntTSL 3 BASIC17.1■□□□□ 0.33
PTPN3P26045 HCG4-201ENST00000418983 998 ntBASIC17.1■□□□□ 0.33
PTPN3P26045 FAM185BP-201ENST00000443595 716 ntBASIC17.1■□□□□ 0.33
PTPN3P26045 RNASET2-206ENST00000476238 887 ntAPPRIS P1 TSL 5 BASIC17.1■□□□□ 0.33
PTPN3P26045 RNA5SP415-201ENST00000517246 115 ntBASIC17.1■□□□□ 0.33
PTPN3P26045 PENK-208ENST00000523051 772 ntTSL 5 BASIC17.1■□□□□ 0.33
PTPN3P26045 AL121894.2-201ENST00000602977 491 ntBASIC17.1■□□□□ 0.33
PTPN3P26045 AC011247.3-202ENST00000605062 570 ntTSL 4 BASIC17.1■□□□□ 0.33
PTPN3P26045 SLC9A3-AS1-204ENST00000606288 791 ntTSL 2 BASIC17.1■□□□□ 0.33
PTPN3P26045 SCN5A-214ENST00000612060 714 ntTSL 5 BASIC17.1■□□□□ 0.33
PTPN3P26045 DHRS7-212ENST00000611054 1321 ntTSL 5 BASIC17.1■□□□□ 0.33
PTPN3P26045 MIB2-217ENST00000504599 3311 ntAPPRIS ALT2 TSL 2 BASIC17.1■□□□□ 0.33
PTPN3P26045 KIF16B-203ENST00000408042 4640 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
PTPN3P26045 SMO-201ENST00000249373 3738 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
PTPN3P26045 COQ7-201ENST00000321998 2657 ntAPPRIS P3 TSL 1 (best) BASIC17.1■□□□□ 0.33
PTPN3P26045 PCIF1-201ENST00000372409 2747 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
PTPN3P26045 AL121758.1-201ENST00000488788 2714 ntAPPRIS P1 TSL 2 BASIC17.1■□□□□ 0.33
PTPN3P26045 CBX6-202ENST00000407418 6122 ntAPPRIS P3 TSL 1 (best) BASIC17.1■□□□□ 0.33
PTPN3P26045 HOXA5-201ENST00000222726 1657 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
PTPN3P26045 AL662844.4-201ENST00000606367 2838 ntBASIC17.1■□□□□ 0.33
PTPN3P26045 PCGF1-201ENST00000233630 1792 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
PTPN3P26045 PAX3-207ENST00000409551 1782 ntAPPRIS ALT1 TSL 1 (best) BASIC17.1■□□□□ 0.33
PTPN3P26045 ZNF561-AS1-204ENST00000587536 1799 ntTSL 2 BASIC17.1■□□□□ 0.33
PTPN3P26045 ZNF354C-201ENST00000315475 5411 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
PTPN3P26045 CYP46A1-201ENST00000261835 2181 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
PTPN3P26045 TDRD7-201ENST00000355295 3834 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
PTPN3P26045 F7-201ENST00000346342 2409 ntAPPRIS ALT2 TSL 1 (best) BASIC17.09■□□□□ 0.33
PTPN3P26045 SLC22A12-205ENST00000473690 2522 ntTSL 2 BASIC17.09■□□□□ 0.33
PTPN3P26045 SLAIN2-201ENST00000264313 6299 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
PTPN3P26045 DIP2A-205ENST00000466639 2711 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
PTPN3P26045 TIGAR-201ENST00000179259 2782 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
PTPN3P26045 AC091980.2-201ENST00000619056 2775 ntAPPRIS P1 BASIC17.09■□□□□ 0.33
PTPN3P26045 HBQ1-201ENST00000199708 536 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
PTPN3P26045 MRNIP-201ENST00000292586 1238 ntAPPRIS P4 TSL 1 (best) BASIC17.09■□□□□ 0.33
PTPN3P26045 ISCA2-201ENST00000298818 851 ntTSL 5 BASIC17.09■□□□□ 0.33
PTPN3P26045 TMEM44-201ENST00000330115 1278 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
PTPN3P26045 LCE1F-201ENST00000334371 357 ntAPPRIS P1 BASIC17.09■□□□□ 0.33
PTPN3P26045 POLD4-207ENST00000531239 584 ntTSL 2 BASIC17.09■□□□□ 0.33
PTPN3P26045 FIBP-212ENST00000533045 1173 ntTSL 5 BASIC17.09■□□□□ 0.33
PTPN3P26045 ZNF445-205ENST00000617032 1291 ntTSL 5 BASIC17.09■□□□□ 0.33
PTPN3P26045 PSMA6-216ENST00000627895 484 ntTSL 5 BASIC17.09■□□□□ 0.33
PTPN3P26045 SRSF2-205ENST00000508921 1390 ntTSL 2 BASIC17.09■□□□□ 0.33
PTPN3P26045 FOXP3-206ENST00000557224 1371 ntTSL 2 BASIC17.09■□□□□ 0.33
Retrieved 100 of 98,524 protein–RNA pairs in 66.4 ms