Protein–RNA interactions for Protein: P24386

CHM, Rab proteins geranylgeranyltransferase component A 1, humanhuman

Predictions only

Length 653 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP24386 POU4F2-201ENST00000281321 3144 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
CHMP24386 SYT6-205ENST00000609117 4424 ntTSL 5 BASIC15.76■□□□□ 0.11
CHMP24386 COLEC11-202ENST00000349077 1259 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
CHMP24386 CELA2A-201ENST00000359621 919 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
CHMP24386 DNAH14-205ENST00000366850 1103 ntTSL 5 BASIC15.76■□□□□ 0.11
CHMP24386 PFDN6-201ENST00000374606 740 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
CHMP24386 CCDC74A-202ENST00000409856 1298 ntAPPRIS ALT2 TSL 1 (best) BASIC15.76■□□□□ 0.11
CHMP24386 AC007834.1-201ENST00000446473 728 ntTSL 3 BASIC15.76■□□□□ 0.11
CHMP24386 NDUFB2-209ENST00000472695 503 ntTSL 5 BASIC15.76■□□□□ 0.11
CHMP24386 AC079776.4-201ENST00000511039 504 ntBASIC15.76■□□□□ 0.11
CHMP24386 BX640515.1-201ENST00000617215 977 ntBASIC15.76■□□□□ 0.11
CHMP24386 AC148477.8-201ENST00000624298 468 ntBASIC15.76■□□□□ 0.11
CHMP24386 AC107918.4-202ENST00000641623 219 ntBASIC15.76■□□□□ 0.11
CHMP24386 ADD1-205ENST00000398125 4079 ntTSL 5 BASIC15.76■□□□□ 0.11
CHMP24386 EFEMP1-202ENST00000394555 3024 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
CHMP24386 TTLL11-201ENST00000321582 3250 ntAPPRIS P1 TSL 5 BASIC15.76■□□□□ 0.11
CHMP24386 DIDO1-207ENST00000395343 8477 ntAPPRIS ALT2 TSL 1 (best) BASIC15.76■□□□□ 0.11
CHMP24386 ABTB1-201ENST00000232744 1965 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
CHMP24386 TP73-208ENST00000378295 5188 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
CHMP24386 RDH10-201ENST00000240285 3949 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
CHMP24386 DLG4-201ENST00000302955 3184 ntAPPRIS P3 TSL 5 BASIC15.76■□□□□ 0.11
CHMP24386 CD276-213ENST00000561213 2690 ntAPPRIS ALT2 TSL 2 BASIC15.76■□□□□ 0.11
CHMP24386 SELENBP1-204ENST00000426705 1928 ntTSL 2 BASIC15.76■□□□□ 0.11
CHMP24386 CDC42BPG-201ENST00000342711 5742 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
CHMP24386 PLEKHB1-202ENST00000354190 2380 ntAPPRIS P4 TSL 1 (best) BASIC15.76■□□□□ 0.11
CHMP24386 PLCB1-203ENST00000378641 7323 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
CHMP24386 MAPK14-201ENST00000229794 3779 ntAPPRIS P5 TSL 1 (best) BASIC15.76■□□□□ 0.11
CHMP24386 FAM53A-201ENST00000308132 2802 ntAPPRIS P1 TSL 2 BASIC15.76■□□□□ 0.11
CHMP24386 COL8A2-202ENST00000397799 4670 ntAPPRIS P1 TSL 5 BASIC15.76■□□□□ 0.11
CHMP24386 TRIM7-204ENST00000393319 2320 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
CHMP24386 PITHD1-201ENST00000246151 1603 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
CHMP24386 TEAD4-201ENST00000358409 1637 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
CHMP24386 CCDC43-202ENST00000457422 2058 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
CHMP24386 PNKD-202ENST00000258362 2991 ntAPPRIS ALT2 TSL 1 (best) BASIC15.75■□□□□ 0.11
CHMP24386 CES4A-206ENST00000540579 1825 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
CHMP24386 SLC25A45-202ENST00000398802 2286 ntAPPRIS P1 TSL 5 BASIC15.75■□□□□ 0.11
CHMP24386 AC110813.1-201ENST00000507934 2209 ntTSL 2 BASIC15.75■□□□□ 0.11
CHMP24386 PRMT1-202ENST00000454376 1327 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
CHMP24386 AL109955.1-201ENST00000417346 1540 ntTSL 2 BASIC15.75■□□□□ 0.11
CHMP24386 LCK-201ENST00000333070 2166 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
CHMP24386 SARDH-205ENST00000422262 2367 ntTSL 5 BASIC15.75■□□□□ 0.11
CHMP24386 SURF4-209ENST00000618229 3200 ntTSL 2 BASIC15.75■□□□□ 0.11
CHMP24386 NGFR-201ENST00000172229 3417 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
CHMP24386 TK2-207ENST00000544898 3441 ntAPPRIS P3 TSL 1 (best) BASIC15.75■□□□□ 0.11
CHMP24386 RBBP7-204ENST00000404022 1904 ntTSL 5 BASIC15.75■□□□□ 0.11
CHMP24386 GHSR-201ENST00000241256 1172 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
CHMP24386 TCEAL2-201ENST00000329035 1080 ntAPPRIS P1 TSL 5 BASIC15.75■□□□□ 0.11
CHMP24386 LAGE3P1-201ENST00000425356 484 ntBASIC15.75■□□□□ 0.11
CHMP24386 RPS2P1-201ENST00000434010 821 ntBASIC15.75■□□□□ 0.11
CHMP24386 AP000688.4-201ENST00000436303 446 ntTSL 3 BASIC15.75■□□□□ 0.11
CHMP24386 KNCN-203ENST00000481882 1037 ntAPPRIS ALT2 TSL 5 BASIC15.75■□□□□ 0.11
CHMP24386 TRMT112-203ENST00000535750 823 ntTSL 2 BASIC15.75■□□□□ 0.11
CHMP24386 AL589182.1-202ENST00000548416 533 ntTSL 4 BASIC15.75■□□□□ 0.11
CHMP24386 PAM16-208ENST00000573553 722 ntTSL 2 BASIC15.75■□□□□ 0.11
CHMP24386 COPE-211ENST00000600932 1144 ntTSL 5 BASIC15.75■□□□□ 0.11
CHMP24386 PRKN-208ENST00000610470 531 ntTSL 2 BASIC15.75■□□□□ 0.11
CHMP24386 LINC01197-204ENST00000611265 956 ntTSL 5 BASIC15.75■□□□□ 0.11
CHMP24386 PRKN-209ENST00000612485 225 ntTSL 5 BASIC15.75■□□□□ 0.11
CHMP24386 AL589182.2-201ENST00000619332 1049 ntBASIC15.75■□□□□ 0.11
CHMP24386 FAM215A-202ENST00000632077 792 ntBASIC15.75■□□□□ 0.11
CHMP24386 HECTD1-201ENST00000399332 9134 ntAPPRIS P1 TSL 5 BASIC15.75■□□□□ 0.11
CHMP24386 SLC29A2-205ENST00000544554 2505 ntAPPRIS P1 TSL 2 BASIC15.75■□□□□ 0.11
CHMP24386 COQ9-201ENST00000262507 1677 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
CHMP24386 TCP1-203ENST00000420894 1671 ntTSL 5 BASIC15.75■□□□□ 0.11
CHMP24386 DMRTC2-204ENST00000596827 1675 ntTSL 2 BASIC15.75■□□□□ 0.11
CHMP24386 SCUBE2-207ENST00000520467 3148 ntAPPRIS P1 TSL 2 BASIC15.75■□□□□ 0.11
CHMP24386 ADAM15-228ENST00000531455 2678 ntAPPRIS ALT2 TSL 2 BASIC15.75■□□□□ 0.11
CHMP24386 MYB-203ENST00000341911 3672 ntAPPRIS ALT1 TSL 1 (best) BASIC15.75■□□□□ 0.11
CHMP24386 WDR13-202ENST00000376729 5469 ntAPPRIS P1 TSL 5 BASIC15.75■□□□□ 0.11
CHMP24386 DGKE-204ENST00000572810 1843 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
CHMP24386 INTS14-209ENST00000567744 2419 ntTSL 2 BASIC15.75■□□□□ 0.11
CHMP24386 SORT1-201ENST00000256637 7028 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
CHMP24386 SPATS2L-202ENST00000360760 2119 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
CHMP24386 ASTN2-205ENST00000361209 4622 ntAPPRIS P2 TSL 1 (best) BASIC15.74■□□□□ 0.11
CHMP24386 FUK-207ENST00000571514 3054 ntTSL 2 BASIC15.74■□□□□ 0.11
CHMP24386 TK2-201ENST00000299697 5114 ntAPPRIS P3 TSL 1 (best) BASIC15.74■□□□□ 0.11
CHMP24386 ZNF500-201ENST00000219478 5880 ntAPPRIS P1 TSL 2 BASIC15.74■□□□□ 0.11
CHMP24386 SHANK1-204ENST00000391814 6622 ntAPPRIS ALT2 TSL 5 BASIC15.74■□□□□ 0.11
CHMP24386 MYOC-201ENST00000037502 2095 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
CHMP24386 THSD1-202ENST00000349258 3189 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
CHMP24386 CYP2R1-201ENST00000334636 2235 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
CHMP24386 KCTD11-201ENST00000333751 2783 ntAPPRIS P1 BASIC15.74■□□□□ 0.11
CHMP24386 MAGEA2-208ENST00000623438 2009 ntAPPRIS P1 TSL 2 BASIC15.74■□□□□ 0.11
CHMP24386 TOR3A-201ENST00000352445 1182 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
CHMP24386 ART5-201ENST00000359918 1241 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
CHMP24386 ENSA-206ENST00000361631 725 ntTSL 2 BASIC15.74■□□□□ 0.11
CHMP24386 INIP-202ENST00000374236 874 ntTSL 2 BASIC15.74■□□□□ 0.11
CHMP24386 SEMA4B-202ENST00000411539 3807 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
CHMP24386 VPS13A-AS1-201ENST00000415172 519 ntTSL 2 BASIC15.74■□□□□ 0.11
CHMP24386 HNRNPDP1-201ENST00000439535 754 ntBASIC15.74■□□□□ 0.11
CHMP24386 S100A2-206ENST00000497140 697 ntTSL 2 BASIC15.74■□□□□ 0.11
CHMP24386 C1QB-203ENST00000509305 1254 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
CHMP24386 ZBP1-208ENST00000541799 1041 ntAPPRIS ALT2 TSL 5 BASIC15.74■□□□□ 0.11
CHMP24386 FGFR1OP2-206ENST00000546072 956 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
CHMP24386 AC084125.4-201ENST00000580385 338 ntTSL 3 BASIC15.74■□□□□ 0.11
CHMP24386 CIRBP-235ENST00000591935 746 ntAPPRIS ALT1 TSL 3 BASIC15.74■□□□□ 0.11
CHMP24386 LIN28B-AS1-205ENST00000637414 879 ntTSL 5 BASIC15.74■□□□□ 0.11
CHMP24386 RASAL3-201ENST00000343625 3293 ntAPPRIS P2 TSL 2 BASIC15.74■□□□□ 0.11
CHMP24386 CDKN2B-AS1-208ENST00000580576 2175 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
CHMP24386 PDAP1-201ENST00000350498 2546 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Retrieved 100 of 98,524 protein–RNA pairs in 30.7 ms