Protein–RNA interactions for Protein: P22362

CCL1, C-C motif chemokine 1, humanhuman

Predictions only

Length 96 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCL1P22362 EYA2-208ENST00000497062 2384 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
CCL1P22362 COL4A3BP-203ENST00000380494 5651 ntTSL 2 BASIC14.45□□□□□ -0.1
CCL1P22362 STX10-201ENST00000242770 1099 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
CCL1P22362 FAM86B2-202ENST00000309608 806 ntTSL 3 BASIC14.45□□□□□ -0.1
CCL1P22362 SNHG5-201ENST00000369605 1032 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
CCL1P22362 SCP2-201ENST00000371509 1889 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
CCL1P22362 MEAF6-202ENST00000373073 603 ntTSL 3 BASIC14.45□□□□□ -0.1
CCL1P22362 HIBCH-202ENST00000392332 2463 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
CCL1P22362 AC073621.1-201ENST00000392730 636 ntBASIC14.45□□□□□ -0.1
CCL1P22362 SP100-204ENST00000409341 1898 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
CCL1P22362 HCG4-201ENST00000418983 998 ntBASIC14.45□□□□□ -0.1
CCL1P22362 EEF1E1-202ENST00000429723 562 ntTSL 3 BASIC14.45□□□□□ -0.1
CCL1P22362 POU5F1P6-201ENST00000466990 990 ntBASIC14.45□□□□□ -0.1
CCL1P22362 AF238378.1-201ENST00000526806 358 ntBASIC14.45□□□□□ -0.1
CCL1P22362 AP1S2-206ENST00000545766 576 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
CCL1P22362 AC116612.1-201ENST00000557144 562 ntTSL 3 BASIC14.45□□□□□ -0.1
CCL1P22362 AC087641.1-201ENST00000557561 1021 ntBASIC14.45□□□□□ -0.1
CCL1P22362 ETFA-208ENST00000559602 792 ntTSL 3 BASIC14.45□□□□□ -0.1
CCL1P22362 STX10-204ENST00000587230 1136 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
CCL1P22362 SMIM8-209ENST00000608868 815 ntAPPRIS P1 TSL 5 BASIC14.45□□□□□ -0.1
CCL1P22362 GRTP1-205ENST00000620217 1073 ntTSL 2 BASIC14.45□□□□□ -0.1
CCL1P22362 AP001350.2-201ENST00000625104 1094 ntBASIC14.45□□□□□ -0.1
CCL1P22362 LINC01144-201ENST00000626198 1710 ntBASIC14.45□□□□□ -0.1
CCL1P22362 MIDN-201ENST00000300952 3790 ntAPPRIS P2 TSL 5 BASIC14.45□□□□□ -0.1
CCL1P22362 JADE2-201ENST00000282605 2748 ntAPPRIS P1 TSL 2 BASIC14.45□□□□□ -0.1
CCL1P22362 PI4KAP1-201ENST00000610959 2425 ntTSL 2 BASIC14.45□□□□□ -0.1
CCL1P22362 ABTB1-201ENST00000232744 1965 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
CCL1P22362 SCAI-202ENST00000373549 1968 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
CCL1P22362 DPP6-202ENST00000377770 3710 ntAPPRIS P4 TSL 1 (best) BASIC14.45□□□□□ -0.1
CCL1P22362 SDR16C5-201ENST00000303749 1840 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
CCL1P22362 PCSK4-201ENST00000300954 2661 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
CCL1P22362 ARHGEF25-202ENST00000333972 2246 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
CCL1P22362 RGS3-206ENST00000374136 2092 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
CCL1P22362 RPS6KA3-201ENST00000379565 7918 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
CCL1P22362 ACSL4-201ENST00000340800 5333 ntAPPRIS P4 TSL 5 BASIC14.45□□□□□ -0.1
CCL1P22362 SNX31-201ENST00000311812 2457 ntAPPRIS P1 TSL 2 BASIC14.44□□□□□ -0.1
CCL1P22362 ASL-205ENST00000395332 1622 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
CCL1P22362 OR6D1P-203ENST00000641209 4860 ntBASIC14.44□□□□□ -0.1
CCL1P22362 REPS1-201ENST00000258062 3161 ntAPPRIS P3 TSL 1 (best) BASIC14.44□□□□□ -0.1
CCL1P22362 TUBA1C-201ENST00000301072 3001 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
CCL1P22362 SH2B1-206ENST00000545570 1488 ntTSL 2 BASIC14.44□□□□□ -0.1
CCL1P22362 BLK-205ENST00000529894 2017 ntTSL 5 BASIC14.44□□□□□ -0.1
CCL1P22362 MUL1-201ENST00000264198 2438 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
CCL1P22362 KLC4-202ENST00000347162 2404 ntAPPRIS ALT2 TSL 1 (best) BASIC14.44□□□□□ -0.1
CCL1P22362 TLE2-202ENST00000426948 2406 ntTSL 5 BASIC14.44□□□□□ -0.1
CCL1P22362 ADGRB2-206ENST00000398556 4879 ntAPPRIS ALT2 TSL 5 BASIC14.44□□□□□ -0.1
CCL1P22362 JADE2-202ENST00000361895 3212 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
CCL1P22362 PEA15-202ENST00000368076 2694 ntTSL 2 BASIC14.44□□□□□ -0.1
CCL1P22362 TBL2-205ENST00000432538 1573 ntTSL 2 BASIC14.44□□□□□ -0.1
CCL1P22362 ISCU-201ENST00000311893 994 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
CCL1P22362 CD1E-203ENST00000368156 861 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
CCL1P22362 PLA2G16-203ENST00000415826 1099 ntAPPRIS P1 TSL 2 BASIC14.44□□□□□ -0.1
CCL1P22362 BX276092.7-202ENST00000422194 696 ntTSL 3 BASIC14.44□□□□□ -0.1
CCL1P22362 AL391069.2-202ENST00000447795 622 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
CCL1P22362 PGAP2-206ENST00000459679 795 ntTSL 2 BASIC14.44□□□□□ -0.1
CCL1P22362 MPIG6B-210ENST00000480039 790 ntAPPRIS ALT2 TSL 1 (best) BASIC14.44□□□□□ -0.1
CCL1P22362 AC080013.1-201ENST00000495318 566 ntTSL 4 BASIC14.44□□□□□ -0.1
CCL1P22362 KBTBD4-203ENST00000525720 980 ntTSL 3 BASIC14.44□□□□□ -0.1
CCL1P22362 DUSP6-204ENST00000547291 1074 ntTSL 2 BASIC14.44□□□□□ -0.1
CCL1P22362 ABCD4-228ENST00000557588 763 ntTSL 3 BASIC14.44□□□□□ -0.1
CCL1P22362 LINC01711-201ENST00000598340 967 ntBASIC14.44□□□□□ -0.1
CCL1P22362 CR381653.1-203ENST00000625153 577 ntTSL 5 BASIC14.44□□□□□ -0.1
CCL1P22362 MCRIP2-211ENST00000629534 341 ntTSL 2 BASIC14.44□□□□□ -0.1
CCL1P22362 PLA2G16-206ENST00000639271 957 ntTSL 5 BASIC14.44□□□□□ -0.1
CCL1P22362 HOXA5-201ENST00000222726 1657 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
CCL1P22362 C2CD4C-201ENST00000332235 3129 ntAPPRIS P1 TSL 2 BASIC14.44□□□□□ -0.1
CCL1P22362 C16orf71-201ENST00000299320 2722 ntAPPRIS P2 TSL 1 (best) BASIC14.44□□□□□ -0.1
CCL1P22362 LINC02199-201ENST00000506655 2702 ntBASIC14.44□□□□□ -0.1
CCL1P22362 PRMT5-203ENST00000397440 1907 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
CCL1P22362 LCMT2-202ENST00000567039 1545 ntTSL 2 BASIC14.44□□□□□ -0.1
CCL1P22362 NR2C2-201ENST00000323373 2406 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
CCL1P22362 SNAI2-201ENST00000020945 2010 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
CCL1P22362 COQ8B-201ENST00000243583 2041 ntAPPRIS ALT2 TSL 1 (best) BASIC14.44□□□□□ -0.1
CCL1P22362 PCGF3-213ENST00000620529 1899 ntBASIC14.44□□□□□ -0.1
CCL1P22362 GFM1-208ENST00000478576 2147 ntTSL 2 BASIC14.44□□□□□ -0.1
CCL1P22362 AP2A2-222ENST00000534328 1491 ntTSL 5 BASIC14.44□□□□□ -0.1
CCL1P22362 ALDOA-226ENST00000569798 1499 ntTSL 2 BASIC14.44□□□□□ -0.1
CCL1P22362 WDR74-205ENST00000525752 1724 ntTSL 5 BASIC14.44□□□□□ -0.1
CCL1P22362 PDK1-203ENST00000410055 2990 ntAPPRIS P3 TSL 1 (best) BASIC14.43□□□□□ -0.1
CCL1P22362 DAPK1-207ENST00000469640 5899 ntTSL 5 BASIC14.43□□□□□ -0.1
CCL1P22362 GJA8-201ENST00000369235 1302 ntAPPRIS P1 BASIC14.43□□□□□ -0.1
CCL1P22362 POLR2A-201ENST00000572844 2083 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
CCL1P22362 CLPTM1-203ENST00000546079 2342 ntTSL 2 BASIC14.43□□□□□ -0.1
CCL1P22362 AC007950.2-201ENST00000615045 2347 ntBASIC14.43□□□□□ -0.1
CCL1P22362 XKR4-203ENST00000622811 3907 ntAPPRIS P1 TSL 5 BASIC14.43□□□□□ -0.1
CCL1P22362 AP001781.3-201ENST00000622211 2939 ntAPPRIS P1 TSL 2 BASIC14.43□□□□□ -0.1
CCL1P22362 WDR53-201ENST00000332629 1679 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
CCL1P22362 GOLGA2P3Y-201ENST00000416946 1653 ntBASIC14.43□□□□□ -0.1
CCL1P22362 C6orf136-203ENST00000376473 1402 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
CCL1P22362 LINC00963-208ENST00000454968 1403 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
CCL1P22362 UNC5D-203ENST00000416672 3532 ntAPPRIS ALT2 TSL 5 BASIC14.43□□□□□ -0.1
CCL1P22362 CNGA3-205ENST00000436404 2504 ntAPPRIS ALT2 TSL 1 (best) BASIC14.43□□□□□ -0.1
CCL1P22362 AC006449.6-201ENST00000612330 2296 ntBASIC14.43□□□□□ -0.1
CCL1P22362 CBWD5-204ENST00000377392 2863 ntTSL 2 BASIC14.43□□□□□ -0.1
CCL1P22362 PRSS27-201ENST00000302641 1130 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
CCL1P22362 PRPF31-201ENST00000321030 2126 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
CCL1P22362 TMEM44-201ENST00000330115 1278 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
CCL1P22362 DNAH14-205ENST00000366850 1103 ntTSL 5 BASIC14.43□□□□□ -0.1
CCL1P22362 FAM3A-205ENST00000393572 1041 ntTSL 2 BASIC14.43□□□□□ -0.1
CCL1P22362 AC109309.1-201ENST00000418995 435 ntTSL 3 BASIC14.43□□□□□ -0.1
Retrieved 100 of 98,524 protein–RNA pairs in 53.1 ms