Protein–RNA interactions for Protein: P20338

RAB4A, Ras-related protein Rab-4A, humanhuman

Predictions only

Length 218 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB4AP20338 C10orf91-201ENST00000321248 1257 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
RAB4AP20338 PRSS57-201ENST00000329267 1025 ntAPPRIS ALT2 TSL 1 (best) BASIC12.93□□□□□ -0.34
RAB4AP20338 TRIM27-202ENST00000377199 2967 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
RAB4AP20338 LINC00487-201ENST00000382045 2131 ntTSL 2 BASIC12.93□□□□□ -0.34
RAB4AP20338 SERF2-207ENST00000409614 582 ntTSL 2 BASIC12.93□□□□□ -0.34
RAB4AP20338 AC069152.1-201ENST00000438030 544 ntBASIC12.93□□□□□ -0.34
RAB4AP20338 MEAF6-205ENST00000448519 666 ntAPPRIS ALT1 TSL 1 (best) BASIC12.93□□□□□ -0.34
RAB4AP20338 AC003982.1-201ENST00000477404 484 ntTSL 2 BASIC12.93□□□□□ -0.34
RAB4AP20338 IAH1-215ENST00000497473 1266 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
RAB4AP20338 AC099522.1-201ENST00000505955 881 ntTSL 3 BASIC12.93□□□□□ -0.34
RAB4AP20338 AC025259.3-201ENST00000564531 542 ntTSL 3 BASIC12.93□□□□□ -0.34
RAB4AP20338 OAZ1-211ENST00000602676 1148 ntAPPRIS P3 TSL 5 BASIC12.93□□□□□ -0.34
RAB4AP20338 AC110285.5-201ENST00000611501 352 ntBASIC12.93□□□□□ -0.34
RAB4AP20338 PRSS57-202ENST00000613411 1090 ntAPPRIS P3 TSL 1 (best) BASIC12.93□□□□□ -0.34
RAB4AP20338 AC116407.2-201ENST00000613639 860 ntBASIC12.93□□□□□ -0.34
RAB4AP20338 MAGIX-206ENST00000615626 1057 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
RAB4AP20338 RIC1-201ENST00000251879 4127 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
RAB4AP20338 UVRAG-201ENST00000356136 4123 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
RAB4AP20338 ZFP90-209ENST00000570495 4636 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
RAB4AP20338 CD72-211ENST00000612238 1424 ntAPPRIS ALT2 TSL 5 BASIC12.93□□□□□ -0.34
RAB4AP20338 ADAD1-203ENST00000388725 1918 ntTSL 2 BASIC12.93□□□□□ -0.34
RAB4AP20338 SHTN1-204ENST00000392903 2400 ntAPPRIS ALT2 TSL 1 (best) BASIC12.93□□□□□ -0.34
RAB4AP20338 AC123912.2-201ENST00000594927 2409 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
RAB4AP20338 FARP1-214ENST00000595437 4926 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
RAB4AP20338 LMF2-202ENST00000474879 2582 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
RAB4AP20338 GSEC-202ENST00000629441 1572 ntTSL 2 BASIC12.93□□□□□ -0.34
RAB4AP20338 TEAD3-202ENST00000402886 2729 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
RAB4AP20338 NEK9-201ENST00000238616 8310 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
RAB4AP20338 MAPKAP1-201ENST00000265960 3395 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
RAB4AP20338 AP002414.2-201ENST00000591780 3365 ntBASIC12.93□□□□□ -0.34
RAB4AP20338 AC091100.1-201ENST00000558424 2354 ntTSL 2 BASIC12.93□□□□□ -0.34
RAB4AP20338 FAM156B-207ENST00000616419 2032 ntAPPRIS P2 TSL 2 BASIC12.93□□□□□ -0.34
RAB4AP20338 FAM156A-212ENST00000617970 2032 ntAPPRIS P2 TSL 2 BASIC12.93□□□□□ -0.34
RAB4AP20338 UMODL1-204ENST00000400427 5442 ntAPPRIS ALT2 TSL 1 (best) BASIC12.93□□□□□ -0.34
RAB4AP20338 ROPN1-209ENST00000495093 1376 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
RAB4AP20338 DUSP28-202ENST00000405954 3461 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
RAB4AP20338 MAP3K12-205ENST00000547488 2807 ntAPPRIS ALT2 TSL 2 BASIC12.93□□□□□ -0.34
RAB4AP20338 KIF19-202ENST00000389916 3643 ntAPPRIS P1 TSL 5 BASIC12.93□□□□□ -0.34
RAB4AP20338 MAPK7-202ENST00000308406 3149 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
RAB4AP20338 CEMIP-202ENST00000356249 7297 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
RAB4AP20338 KRT35-202ENST00000393989 1670 ntAPPRIS P1 TSL 5 BASIC12.93□□□□□ -0.34
RAB4AP20338 MFGE8-215ENST00000566497 1689 ntAPPRIS P1 TSL 5 BASIC12.93□□□□□ -0.34
RAB4AP20338 SPIN3-204ENST00000638257 4835 ntAPPRIS P1 TSL 5 BASIC12.92□□□□□ -0.34
RAB4AP20338 TOP1MT-218ENST00000523676 1982 ntTSL 5 BASIC12.92□□□□□ -0.34
RAB4AP20338 TTC3-203ENST00000399010 2115 ntTSL 5 BASIC12.92□□□□□ -0.34
RAB4AP20338 HSDL2-202ENST00000398805 3350 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
RAB4AP20338 DCLK2-204ENST00000506325 2298 ntAPPRIS ALT2 TSL 5 BASIC12.92□□□□□ -0.34
RAB4AP20338 KBTBD12-202ENST00000405109 5727 ntAPPRIS P1 TSL 5 BASIC12.92□□□□□ -0.34
RAB4AP20338 DLGAP1-214ENST00000539435 2402 ntTSL 2 BASIC12.92□□□□□ -0.34
RAB4AP20338 TTLL13P-202ENST00000438251 2738 ntAPPRIS P5 TSL 5 BASIC12.92□□□□□ -0.34
RAB4AP20338 ACD-215ENST00000620761 1483 ntAPPRIS ALT2 TSL 1 (best) BASIC12.92□□□□□ -0.34
RAB4AP20338 TMPRSS6-201ENST00000346753 3197 ntAPPRIS P3 TSL 1 (best) BASIC12.92□□□□□ -0.34
RAB4AP20338 WDR18-202ENST00000585809 1608 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
RAB4AP20338 FERMT1-201ENST00000217289 5151 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
RAB4AP20338 AC105001.2-201ENST00000554914 1753 ntAPPRIS P1 TSL 2 BASIC12.92□□□□□ -0.34
RAB4AP20338 TSNARE1-201ENST00000307180 1907 ntAPPRIS ALT2 TSL 5 BASIC12.92□□□□□ -0.34
RAB4AP20338 ARHGAP23P1-201ENST00000562773 1937 ntBASIC12.92□□□□□ -0.34
RAB4AP20338 HOXD3-202ENST00000410016 2384 ntAPPRIS P1 TSL 5 BASIC12.92□□□□□ -0.34
RAB4AP20338 CDC25B-204ENST00000379598 2990 ntTSL 2 BASIC12.92□□□□□ -0.34
RAB4AP20338 UBE3A-220ENST00000630424 5075 ntAPPRIS P3 TSL 5 BASIC12.92□□□□□ -0.34
RAB4AP20338 KDR-201ENST00000263923 5831 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
RAB4AP20338 OSGEP-201ENST00000206542 2002 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
RAB4AP20338 WDR74-202ENST00000311713 1153 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
RAB4AP20338 SDHC-201ENST00000342751 1127 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
RAB4AP20338 SLC6A13-201ENST00000343164 2185 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
RAB4AP20338 CNKSR1-201ENST00000361530 2625 ntAPPRIS P3 TSL 1 (best) BASIC12.92□□□□□ -0.34
RAB4AP20338 CCDC107-202ENST00000378406 1016 ntAPPRIS ALT2 TSL 2 BASIC12.92□□□□□ -0.34
RAB4AP20338 ARSE-201ENST00000381134 1853 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
RAB4AP20338 WWOX-203ENST00000406884 1701 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
RAB4AP20338 RAB29-203ENST00000414729 1157 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
RAB4AP20338 PHKG2-202ENST00000424889 1566 ntTSL 2 BASIC12.92□□□□□ -0.34
RAB4AP20338 CCDC107-206ENST00000426546 1242 ntAPPRIS P3 TSL 1 (best) BASIC12.92□□□□□ -0.34
RAB4AP20338 AP000697.1-201ENST00000430607 339 ntTSL 5 BASIC12.92□□□□□ -0.34
RAB4AP20338 MAP2K4P1-201ENST00000438453 1195 ntBASIC12.92□□□□□ -0.34
RAB4AP20338 FUT3-202ENST00000458379 2024 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
RAB4AP20338 B3GAT3P1-201ENST00000471720 806 ntBASIC12.92□□□□□ -0.34
RAB4AP20338 AC091133.2-201ENST00000505903 428 ntTSL 3 BASIC12.92□□□□□ -0.34
RAB4AP20338 AC117500.2-201ENST00000508145 1561 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
RAB4AP20338 THAP6-213ENST00000514480 1161 ntAPPRIS P3 TSL 1 (best) BASIC12.92□□□□□ -0.34
RAB4AP20338 SCARA5-203ENST00000518030 1074 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
RAB4AP20338 SIVA1-203ENST00000535554 1244 ntAPPRIS ALT1 TSL 2 BASIC12.92□□□□□ -0.34
RAB4AP20338 C14orf144-202ENST00000555282 854 ntTSL 3 BASIC12.92□□□□□ -0.34
RAB4AP20338 AC233263.1-201ENST00000578059 224 ntBASIC12.92□□□□□ -0.34
RAB4AP20338 AC010327.5-201ENST00000586923 3061 ntBASIC12.92□□□□□ -0.34
RAB4AP20338 RABAC1-210ENST00000601891 628 ntTSL 3 BASIC12.92□□□□□ -0.34
RAB4AP20338 AP000692.2-201ENST00000608391 879 ntBASIC12.92□□□□□ -0.34
RAB4AP20338 TRAPPC3-208ENST00000616074 1114 ntTSL 5 BASIC12.92□□□□□ -0.34
RAB4AP20338 MIR6786-201ENST00000616843 113 ntBASIC12.92□□□□□ -0.34
RAB4AP20338 KRTAP5-11-203ENST00000617152 558 ntAPPRIS ALT2 TSL 5 BASIC12.92□□□□□ -0.34
RAB4AP20338 VAT1-201ENST00000355653 2734 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
RAB4AP20338 ABTB2-201ENST00000435224 4902 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
RAB4AP20338 ANKLE2-210ENST00000542657 2446 ntTSL 2 BASIC12.92□□□□□ -0.34
RAB4AP20338 DEF6-201ENST00000316637 2262 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
RAB4AP20338 Z99756.1-201ENST00000458463 1951 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
RAB4AP20338 PHF14-215ENST00000634607 3407 ntAPPRIS P1 TSL 5 BASIC12.92□□□□□ -0.34
RAB4AP20338 DNAL4-201ENST00000216068 1504 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
RAB4AP20338 C12orf42-205ENST00000548048 1532 ntAPPRIS ALT2 TSL 5 BASIC12.92□□□□□ -0.34
RAB4AP20338 FBN3-207ENST00000601739 9086 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
RAB4AP20338 DDX1-202ENST00000381341 2817 ntAPPRIS P1 TSL 5 BASIC12.92□□□□□ -0.34
RAB4AP20338 COL25A1-201ENST00000399126 2674 ntAPPRIS ALT2 TSL 5 BASIC12.92□□□□□ -0.34
Retrieved 100 of 98,524 protein–RNA pairs in 32 ms