Protein–RNA interactions for Protein: P16333

NCK1, Cytoplasmic protein NCK1, humanhuman

Predictions only

Length 377 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NCK1P16333 CCDC188-201ENST00000439765 1475 ntAPPRIS P1 TSL 5 BASIC15.92■□□□□ 0.14
NCK1P16333 CAPRIN1-207ENST00000529307 2266 ntAPPRIS ALT2 TSL 2 BASIC15.92■□□□□ 0.14
NCK1P16333 ANXA11-203ENST00000422982 2534 ntAPPRIS P3 TSL 1 (best) BASIC15.92■□□□□ 0.14
NCK1P16333 C14orf79-205ENST00000549240 2503 ntAPPRIS ALT2 TSL 2 BASIC15.92■□□□□ 0.14
NCK1P16333 MAGI1-216ENST00000497477 3555 ntTSL 5 BASIC15.92■□□□□ 0.14
NCK1P16333 TMEM19-201ENST00000266673 5656 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
NCK1P16333 PTS-201ENST00000280362 935 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
NCK1P16333 CLDN7-202ENST00000397317 1228 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
NCK1P16333 AC093901.1-201ENST00000414886 778 ntTSL 5 BASIC15.92■□□□□ 0.14
NCK1P16333 HLA-J-202ENST00000469281 1241 ntBASIC15.92■□□□□ 0.14
NCK1P16333 RARRES2-205ENST00000482669 563 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
NCK1P16333 BOC-211ENST00000484034 1286 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
NCK1P16333 AC091607.1-201ENST00000490318 1060 ntBASIC15.92■□□□□ 0.14
NCK1P16333 LY6E-213ENST00000522528 606 ntTSL 3 BASIC15.92■□□□□ 0.14
NCK1P16333 AC005258.1-201ENST00000621615 1268 ntAPPRIS P1 TSL 2 BASIC15.92■□□□□ 0.14
NCK1P16333 GLMP-201ENST00000362007 1604 ntAPPRIS P3 TSL 1 (best) BASIC15.92■□□□□ 0.14
NCK1P16333 AC092850.2-201ENST00000623821 2697 ntBASIC15.92■□□□□ 0.14
NCK1P16333 TMEM263-201ENST00000280756 3362 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
NCK1P16333 NCOA6-206ENST00000612493 4082 ntAPPRIS ALT2 TSL 5 BASIC15.92■□□□□ 0.14
NCK1P16333 LRRC20-206ENST00000395011 2903 ntTSL 4 BASIC15.92■□□□□ 0.14
NCK1P16333 HHATL-205ENST00000441594 1865 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
NCK1P16333 SNX19-207ENST00000528555 1506 ntTSL 2 BASIC15.92■□□□□ 0.14
NCK1P16333 RAD23B-201ENST00000358015 4119 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
NCK1P16333 AC073508.3-201ENST00000619697 1419 ntBASIC15.92■□□□□ 0.14
NCK1P16333 AP000487.1-202ENST00000500185 2602 ntTSL 2 BASIC15.92■□□□□ 0.14
NCK1P16333 PPP2R5D-202ENST00000394110 2894 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
NCK1P16333 GPS1-202ENST00000320548 1949 ntTSL 2 BASIC15.92■□□□□ 0.14
NCK1P16333 COLGALT2-201ENST00000361927 5177 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
NCK1P16333 NTMT1-203ENST00000372483 1315 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
NCK1P16333 SIK3-205ENST00000446921 3858 ntAPPRIS ALT2 TSL 1 (best) BASIC15.92■□□□□ 0.14
NCK1P16333 NT5DC3-201ENST00000392876 7207 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
NCK1P16333 FAM222B-202ENST00000452648 2836 ntAPPRIS P1 TSL 2 BASIC15.91■□□□□ 0.14
NCK1P16333 AC009292.1-201ENST00000502156 1986 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
NCK1P16333 TMEM119-201ENST00000392806 2707 ntAPPRIS P2 TSL 1 (best) BASIC15.91■□□□□ 0.14
NCK1P16333 COL17A1-202ENST00000369733 5488 ntAPPRIS ALT2 TSL 5 BASIC15.91■□□□□ 0.14
NCK1P16333 B3GNT8-201ENST00000321702 1874 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
NCK1P16333 PTPRN2-204ENST00000404321 1374 ntTSL 5 BASIC15.91■□□□□ 0.14
NCK1P16333 CBX6-202ENST00000407418 6122 ntAPPRIS P3 TSL 1 (best) BASIC15.91■□□□□ 0.14
NCK1P16333 RBFADN-201ENST00000562391 1350 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
NCK1P16333 ZNF451-203ENST00000370706 5268 ntAPPRIS ALT2 TSL 1 (best) BASIC15.91■□□□□ 0.14
NCK1P16333 GMPR-201ENST00000259727 1515 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
NCK1P16333 EYA2-201ENST00000317304 1540 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
NCK1P16333 ROBO3-201ENST00000397801 4569 ntAPPRIS P2 TSL 1 (best) BASIC15.91■□□□□ 0.14
NCK1P16333 ROBO3-220ENST00000538940 4551 ntAPPRIS ALT2 TSL 5 BASIC15.91■□□□□ 0.14
NCK1P16333 GGCT-202ENST00000275428 1173 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
NCK1P16333 SMIM11A-202ENST00000399295 1074 ntAPPRIS P1 TSL 2 BASIC15.91■□□□□ 0.14
NCK1P16333 GGT1-205ENST00000403838 1033 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
NCK1P16333 BECN2-201ENST00000419583 1296 ntAPPRIS P1 BASIC15.91■□□□□ 0.14
NCK1P16333 AL645929.1-201ENST00000420084 975 ntBASIC15.91■□□□□ 0.14
NCK1P16333 KRT18P57-201ENST00000443599 1254 ntBASIC15.91■□□□□ 0.14
NCK1P16333 NUS1P1-201ENST00000446295 882 ntBASIC15.91■□□□□ 0.14
NCK1P16333 CLN6-204ENST00000564752 900 ntTSL 3 BASIC15.91■□□□□ 0.14
NCK1P16333 ELAVL1-202ENST00000593807 856 ntTSL 3 BASIC15.91■□□□□ 0.14
NCK1P16333 IRF3-222ENST00000599144 1117 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
NCK1P16333 SMIM11B-207ENST00000624758 1074 ntAPPRIS P1 TSL 2 BASIC15.91■□□□□ 0.14
NCK1P16333 CLN6-214ENST00000636314 442 ntTSL 3 BASIC15.91■□□□□ 0.14
NCK1P16333 ZNF671-201ENST00000317398 2431 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
NCK1P16333 CALHM3-201ENST00000369783 1652 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
NCK1P16333 PTHLH-202ENST00000395868 1674 ntAPPRIS P3 TSL 1 (best) BASIC15.91■□□□□ 0.14
NCK1P16333 SYBU-205ENST00000422135 3226 ntAPPRIS ALT2 TSL 5 BASIC15.91■□□□□ 0.14
NCK1P16333 NRP1-203ENST00000374821 1988 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
NCK1P16333 NID2-208ENST00000617139 3827 ntTSL 5 BASIC15.91■□□□□ 0.14
NCK1P16333 CUTC-202ENST00000370476 1346 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
NCK1P16333 EIF4A1-203ENST00000577269 1319 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
NCK1P16333 KIF5B-201ENST00000302418 5877 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
NCK1P16333 USP43-201ENST00000285199 4169 ntAPPRIS P3 TSL 1 (best) BASIC15.9■□□□□ 0.14
NCK1P16333 SNAI2-201ENST00000020945 2010 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
NCK1P16333 AC148477.5-201ENST00000625164 1645 ntBASIC15.9■□□□□ 0.14
NCK1P16333 KTN1-AS1-202ENST00000412224 2185 ntTSL 2 BASIC15.9■□□□□ 0.14
NCK1P16333 MIB1-201ENST00000261537 9576 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
NCK1P16333 GK2-201ENST00000358842 1942 ntAPPRIS P1 BASIC15.9■□□□□ 0.14
NCK1P16333 SALL4-203ENST00000395997 1918 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
NCK1P16333 HS3ST3B1-201ENST00000360954 5367 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
NCK1P16333 POLR2A-201ENST00000572844 2083 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
NCK1P16333 COG5-203ENST00000393603 5418 ntAPPRIS ALT2 TSL 1 (best) BASIC15.9■□□□□ 0.14
NCK1P16333 SH2D2A-202ENST00000368199 1658 ntAPPRIS P3 TSL 1 (best) BASIC15.9■□□□□ 0.14
NCK1P16333 AXIN2-202ENST00000375702 2541 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
NCK1P16333 GAS2L2-201ENST00000604063 2661 ntAPPRIS ALT2 TSL 5 BASIC15.9■□□□□ 0.14
NCK1P16333 SSH3-203ENST00000376757 2990 ntTSL 2 BASIC15.9■□□□□ 0.14
NCK1P16333 GEM-202ENST00000396194 2103 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
NCK1P16333 AC114763.1-202ENST00000414911 867 ntTSL 3 BASIC15.9■□□□□ 0.14
NCK1P16333 XXYLT1-205ENST00000437101 2149 ntTSL 2 BASIC15.9■□□□□ 0.14
NCK1P16333 AC092647.4-201ENST00000457211 535 ntBASIC15.9■□□□□ 0.14
NCK1P16333 ST20-202ENST00000485386 529 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
NCK1P16333 AC079848.1-202ENST00000507924 444 ntTSL 3 BASIC15.9■□□□□ 0.14
NCK1P16333 CCNG1-211ENST00000512163 919 ntTSL 2 BASIC15.9■□□□□ 0.14
NCK1P16333 TK2-213ENST00000563369 882 ntTSL 5 BASIC15.9■□□□□ 0.14
NCK1P16333 ATP6V0C-202ENST00000564973 1081 ntTSL 2 BASIC15.9■□□□□ 0.14
NCK1P16333 AL603832.2-201ENST00000566195 2125 ntBASIC15.9■□□□□ 0.14
NCK1P16333 ANAPC11-204ENST00000571024 668 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
NCK1P16333 ANAPC11-218ENST00000582222 523 ntTSL 2 BASIC15.9■□□□□ 0.14
NCK1P16333 AC006011.2-201ENST00000621313 1158 ntBASIC15.9■□□□□ 0.14
NCK1P16333 AL807752.6-202ENST00000622933 765 ntAPPRIS P5 TSL 3 BASIC15.9■□□□□ 0.14
NCK1P16333 PTPN11-201ENST00000351677 6101 ntAPPRIS P3 TSL 1 (best) BASIC15.9■□□□□ 0.14
NCK1P16333 NABP2-201ENST00000267023 1417 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
NCK1P16333 AC012485.3-201ENST00000637634 2424 ntTSL 5 BASIC15.9■□□□□ 0.14
NCK1P16333 LATS1-202ENST00000392273 2567 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
NCK1P16333 STPG3-AS1-201ENST00000612170 1701 ntTSL 2 BASIC15.9■□□□□ 0.14
NCK1P16333 HIST1H2BN-204ENST00000612898 1723 ntAPPRIS P1 BASIC15.9■□□□□ 0.14
NCK1P16333 KIFC3-206ENST00000541240 3047 ntTSL 2 BASIC15.9■□□□□ 0.14
Retrieved 100 of 98,524 protein–RNA pairs in 69.8 ms