Protein–RNA interactions for Protein: P16298

PPP3CB, Serine/threonine-protein phosphatase 2B catalytic subunit beta isoform, humanhuman

Predictions only

Length 524 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PPP3CBP16298 ZNF514-202ENST00000411425 2755 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
PPP3CBP16298 COQ9-201ENST00000262507 1677 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
PPP3CBP16298 TMEM37-201ENST00000306406 1688 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
PPP3CBP16298 TRIM60-203ENST00000508504 1674 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
PPP3CBP16298 PI4KAP1-201ENST00000610959 2425 ntTSL 2 BASIC15.15■□□□□ 0.02
PPP3CBP16298 CAP2-208ENST00000611958 2686 ntTSL 2 BASIC15.15■□□□□ 0.02
PPP3CBP16298 LRRC59-201ENST00000225972 2910 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
PPP3CBP16298 PCSK5-205ENST00000545128 9538 ntAPPRIS ALT2 TSL 5 BASIC15.15■□□□□ 0.02
PPP3CBP16298 MC1R-204ENST00000639847 2567 ntAPPRIS P1 TSL 5 BASIC15.15■□□□□ 0.02
PPP3CBP16298 AC010198.1-201ENST00000500076 1552 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
PPP3CBP16298 HMGCLL1-202ENST00000308161 1314 ntTSL 2 BASIC15.15■□□□□ 0.02
PPP3CBP16298 SERPINH1-201ENST00000358171 2225 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
PPP3CBP16298 LINC00683-201ENST00000578803 2221 ntTSL 2 BASIC15.15■□□□□ 0.02
PPP3CBP16298 MICALL2-201ENST00000297508 3121 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
PPP3CBP16298 TRPC4AP-202ENST00000451813 3138 ntTSL 2 BASIC15.15■□□□□ 0.02
PPP3CBP16298 PPOX-202ENST00000367999 1740 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
PPP3CBP16298 GGT7-201ENST00000336431 2642 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
PPP3CBP16298 DNAJA3-201ENST00000262375 2763 ntAPPRIS P3 TSL 1 (best) BASIC15.14■□□□□ 0.01
PPP3CBP16298 RXRB-201ENST00000374680 2908 ntAPPRIS P3 TSL 1 (best) BASIC15.14■□□□□ 0.01
PPP3CBP16298 TNFRSF14-AS1-205ENST00000449660 1629 ntTSL 2 BASIC15.14■□□□□ 0.01
PPP3CBP16298 SIGLEC7-202ENST00000317643 1754 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
PPP3CBP16298 BOC-212ENST00000485230 2173 ntTSL 2 BASIC15.14■□□□□ 0.01
PPP3CBP16298 CNP-201ENST00000393888 2583 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
PPP3CBP16298 KIRREL2-205ENST00000592409 2563 ntAPPRIS ALT2 TSL 1 (best) BASIC15.14■□□□□ 0.01
PPP3CBP16298 PPP1R3B-202ENST00000519699 2334 ntAPPRIS P1 TSL 2 BASIC15.14■□□□□ 0.01
PPP3CBP16298 AC008741.2-201ENST00000612792 3115 ntBASIC15.14■□□□□ 0.01
PPP3CBP16298 TLE3-205ENST00000539550 2464 ntTSL 2 BASIC15.14■□□□□ 0.01
PPP3CBP16298 NAP1L4-222ENST00000620138 2479 ntTSL 2 BASIC15.14■□□□□ 0.01
PPP3CBP16298 MYOC-201ENST00000037502 2095 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
PPP3CBP16298 MRPL20P1-201ENST00000400819 433 ntBASIC15.14■□□□□ 0.01
PPP3CBP16298 COPS7B-207ENST00000410024 1103 ntAPPRIS P1 TSL 2 BASIC15.14■□□□□ 0.01
PPP3CBP16298 LINC00982-205ENST00000420957 435 ntBASIC15.14■□□□□ 0.01
PPP3CBP16298 SNHG11-205ENST00000421599 1046 ntTSL 3 BASIC15.14■□□□□ 0.01
PPP3CBP16298 ZNF295-AS1-202ENST00000429739 783 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
PPP3CBP16298 VN2R19P-201ENST00000442399 1052 ntBASIC15.14■□□□□ 0.01
PPP3CBP16298 C9orf147-204ENST00000463223 863 ntTSL 3 BASIC15.14■□□□□ 0.01
PPP3CBP16298 AC108073.2-201ENST00000464002 357 ntBASIC15.14■□□□□ 0.01
PPP3CBP16298 MRPL20-203ENST00000482352 1049 ntTSL 2 BASIC15.14■□□□□ 0.01
PPP3CBP16298 TRAF3IP2-AS1-208ENST00000525151 609 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
PPP3CBP16298 AP000763.4-201ENST00000544674 752 ntTSL 5 BASIC15.14■□□□□ 0.01
PPP3CBP16298 DCTPP1-203ENST00000567983 801 ntTSL 5 BASIC15.14■□□□□ 0.01
PPP3CBP16298 NUTF2-206ENST00000569436 1119 ntAPPRIS P1 TSL 2 BASIC15.14■□□□□ 0.01
PPP3CBP16298 CDC42EP4-206ENST00000581014 737 ntTSL 5 BASIC15.14■□□□□ 0.01
PPP3CBP16298 AC010654.1-201ENST00000615722 808 ntBASIC15.14■□□□□ 0.01
PPP3CBP16298 AC079781.4-201ENST00000641908 219 ntBASIC15.14■□□□□ 0.01
PPP3CBP16298 ZNF134-201ENST00000396161 4914 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
PPP3CBP16298 ANTXR1-201ENST00000303714 5859 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
PPP3CBP16298 RNF32-201ENST00000311822 1842 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
PPP3CBP16298 SNTG2-202ENST00000407292 1436 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
PPP3CBP16298 TRIM72-201ENST00000322122 8500 ntAPPRIS P1 TSL 2 BASIC15.14■□□□□ 0.01
PPP3CBP16298 LMNA-205ENST00000368299 2253 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
PPP3CBP16298 PWP1-202ENST00000541166 1722 ntTSL 2 BASIC15.14■□□□□ 0.01
PPP3CBP16298 RAI1-207ENST00000640861 5172 ntTSL 5 BASIC15.14■□□□□ 0.01
PPP3CBP16298 SAP130-202ENST00000259235 4065 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
PPP3CBP16298 BICD1-205ENST00000550207 1328 ntTSL 3 BASIC15.14■□□□□ 0.01
PPP3CBP16298 SIGIRR-201ENST00000332725 1639 ntAPPRIS P1 TSL 2 BASIC15.14■□□□□ 0.01
PPP3CBP16298 SMOX-205ENST00000379460 2230 ntAPPRIS P1 TSL 2 BASIC15.13■□□□□ 0.01
PPP3CBP16298 AC106886.4-201ENST00000623557 2502 ntBASIC15.13■□□□□ 0.01
PPP3CBP16298 KCNG3-201ENST00000306078 3824 ntAPPRIS P3 TSL 1 (best) BASIC15.13■□□□□ 0.01
PPP3CBP16298 AC002310.6-201ENST00000624451 1377 ntBASIC15.13■□□□□ 0.01
PPP3CBP16298 PCCB-209ENST00000469217 1841 ntAPPRIS ALT2 TSL 2 BASIC15.13■□□□□ 0.01
PPP3CBP16298 TJP1-212ENST00000614355 6977 ntAPPRIS ALT2 TSL 5 BASIC15.13■□□□□ 0.01
PPP3CBP16298 USP13-201ENST00000263966 8323 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
PPP3CBP16298 EFEMP1-202ENST00000394555 3024 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
PPP3CBP16298 MGAT1-201ENST00000307826 2761 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
PPP3CBP16298 LYPLA2-204ENST00000374505 907 ntTSL 3 BASIC15.13■□□□□ 0.01
PPP3CBP16298 YBX2P1-201ENST00000394192 760 ntBASIC15.13■□□□□ 0.01
PPP3CBP16298 ZGLP1-201ENST00000403352 1028 ntAPPRIS ALT2 TSL 5 BASIC15.13■□□□□ 0.01
PPP3CBP16298 CROCCP2-202ENST00000412962 2773 ntBASIC15.13■□□□□ 0.01
PPP3CBP16298 GNB2-205ENST00000419828 1285 ntTSL 5 BASIC15.13■□□□□ 0.01
PPP3CBP16298 SVOPL-204ENST00000436657 1420 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
PPP3CBP16298 CR559946.1-201ENST00000453835 531 ntTSL 4 BASIC15.13■□□□□ 0.01
PPP3CBP16298 ARL15-201ENST00000502271 3248 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
PPP3CBP16298 PLA2G12A-202ENST00000502283 1189 ntAPPRIS ALT2 TSL 1 (best) BASIC15.13■□□□□ 0.01
PPP3CBP16298 SUMO2P17-202ENST00000508743 738 ntTSL 3 BASIC15.13■□□□□ 0.01
PPP3CBP16298 MOK-203ENST00000517966 1230 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
PPP3CBP16298 SLC25A3P1-206ENST00000569142 925 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
PPP3CBP16298 CDKN2B-AS1-208ENST00000580576 2175 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
PPP3CBP16298 KLK6-204ENST00000594641 842 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
PPP3CBP16298 SBDS-205ENST00000617799 953 ntAPPRIS ALT1 TSL 5 BASIC15.13■□□□□ 0.01
PPP3CBP16298 C1QL3-202ENST00000619991 783 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
PPP3CBP16298 MAGEA2-208ENST00000623438 2009 ntAPPRIS P1 TSL 2 BASIC15.13■□□□□ 0.01
PPP3CBP16298 SFRP1-201ENST00000220772 4492 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
PPP3CBP16298 FENDRR-206ENST00000599749 2843 ntTSL 3 BASIC15.13■□□□□ 0.01
PPP3CBP16298 SLC9A2-201ENST00000233969 5410 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
PPP3CBP16298 CCDC155-201ENST00000447857 2378 ntAPPRIS P2 TSL 1 (best) BASIC15.13■□□□□ 0.01
PPP3CBP16298 NUDT16P1-202ENST00000499077 2208 ntTSL 2 BASIC15.13■□□□□ 0.01
PPP3CBP16298 MAP4K3-201ENST00000263881 4362 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
PPP3CBP16298 DRC3-201ENST00000313838 2064 ntAPPRIS P1 TSL 5 BASIC15.13■□□□□ 0.01
PPP3CBP16298 RRBP1-208ENST00000470422 2070 ntTSL 2 BASIC15.13■□□□□ 0.01
PPP3CBP16298 DMKN-201ENST00000339686 1927 ntAPPRIS P3 TSL 1 (best) BASIC15.13■□□□□ 0.01
PPP3CBP16298 CAP2-202ENST00000378990 1812 ntTSL 2 BASIC15.13■□□□□ 0.01
PPP3CBP16298 LRP11-201ENST00000239367 3260 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
PPP3CBP16298 GMIP-204ENST00000587238 2987 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
PPP3CBP16298 RREB1-204ENST00000379938 8778 ntAPPRIS P3 TSL 1 (best) BASIC15.12■□□□□ 0.01
PPP3CBP16298 AL355312.1-201ENST00000407115 2176 ntBASIC15.12■□□□□ 0.01
PPP3CBP16298 BEST2-202ENST00000549706 2183 ntAPPRIS P1 TSL 5 BASIC15.12■□□□□ 0.01
PPP3CBP16298 C9orf43-202ENST00000374165 2049 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
PPP3CBP16298 ACTN4-201ENST00000252699 4963 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
PPP3CBP16298 MAP3K9-201ENST00000381250 4025 ntAPPRIS ALT2 TSL 5 BASIC15.12■□□□□ 0.01
Retrieved 100 of 98,524 protein–RNA pairs in 59.7 ms