Protein–RNA interactions for Protein: P13942

COL11A2, Collagen alpha-2(XI) chain, humanhuman

Predicted RBP Predictions only

Length 1,736 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL11A2P13942 ILVBL-209ENST00000534378 2067 ntTSL 5 BASIC20.17■□□□□ 0.82
COL11A2P13942 ZBTB16-202ENST00000392996 2287 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
COL11A2P13942 AC118553.2-202ENST00000638792 2729 ntAPPRIS ALT2 TSL 5 BASIC20.17■□□□□ 0.82
COL11A2P13942 ABCF3-203ENST00000429586 2624 ntAPPRIS P2 TSL 1 (best) BASIC20.17■□□□□ 0.82
COL11A2P13942 GAS2L1-210ENST00000621062 2483 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
COL11A2P13942 CITED2-201ENST00000367651 2354 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
COL11A2P13942 SEPT6-209ENST00000489216 1617 ntAPPRIS ALT1 TSL 1 (best) BASIC20.16■□□□□ 0.82
COL11A2P13942 TM6SF2-201ENST00000389363 1505 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
COL11A2P13942 TNRC18-202ENST00000399434 1459 ntTSL 2 BASIC20.16■□□□□ 0.82
COL11A2P13942 PRMT1-202ENST00000454376 1327 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
COL11A2P13942 HRAS-202ENST00000397594 1099 ntTSL 2 BASIC20.16■□□□□ 0.82
COL11A2P13942 AL606534.2-205ENST00000437691 346 ntTSL 5 BASIC20.16■□□□□ 0.82
COL11A2P13942 AC034102.5-201ENST00000548731 540 ntTSL 4 BASIC20.16■□□□□ 0.82
COL11A2P13942 TNNT1-209ENST00000587758 1016 ntAPPRIS ALT2 TSL 1 (best) BASIC20.16■□□□□ 0.82
COL11A2P13942 AL158212.4-201ENST00000624062 1286 ntBASIC20.16■□□□□ 0.82
COL11A2P13942 ADARB1-205ENST00000437626 5032 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
COL11A2P13942 SUPT20H-202ENST00000356185 2681 ntAPPRIS P3 TSL 1 (best) BASIC20.16■□□□□ 0.82
COL11A2P13942 TMEM50B-210ENST00000542230 2375 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
COL11A2P13942 PHGDH-208ENST00000641023 2096 ntAPPRIS P1 BASIC20.16■□□□□ 0.82
COL11A2P13942 LETM2-201ENST00000297720 1693 ntTSL 2 BASIC20.16■□□□□ 0.82
COL11A2P13942 ZFYVE19-203ENST00000355341 2775 ntAPPRIS P3 TSL 1 (best) BASIC20.16■□□□□ 0.82
COL11A2P13942 CROCCP2-202ENST00000412962 2773 ntBASIC20.16■□□□□ 0.82
COL11A2P13942 PRKACG-201ENST00000377276 1585 ntAPPRIS P1 BASIC20.16■□□□□ 0.82
COL11A2P13942 AC009041.2-204ENST00000568394 3343 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
COL11A2P13942 ATOH1-201ENST00000306011 2212 ntAPPRIS P1 BASIC20.16■□□□□ 0.82
COL11A2P13942 FAM104B-202ENST00000358460 1179 ntAPPRIS P3 TSL 1 (best) BASIC20.16■□□□□ 0.82
COL11A2P13942 AKIP1-204ENST00000396648 1084 ntAPPRIS ALT2 TSL 2 BASIC20.16■□□□□ 0.82
COL11A2P13942 AL161785.3-201ENST00000435157 395 ntTSL 3 BASIC20.16■□□□□ 0.82
COL11A2P13942 RPS24-203ENST00000435275 656 ntAPPRIS ALT1 TSL 2 BASIC20.16■□□□□ 0.82
COL11A2P13942 RAB1B-202ENST00000527397 991 ntTSL 3 BASIC20.16■□□□□ 0.82
COL11A2P13942 AC006064.3-201ENST00000537921 477 ntTSL 4 BASIC20.16■□□□□ 0.82
COL11A2P13942 LINC01115-203ENST00000606068 577 ntBASIC20.16■□□□□ 0.82
COL11A2P13942 RPS24-214ENST00000613865 538 ntTSL 5 BASIC20.16■□□□□ 0.82
COL11A2P13942 ZNF696-201ENST00000330143 2795 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
COL11A2P13942 RASA4B-201ENST00000306682 2589 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
COL11A2P13942 MAGEA2-201ENST00000595583 1830 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
COL11A2P13942 CCT6A-202ENST00000335503 2529 ntTSL 5 BASIC20.15■□□□□ 0.82
COL11A2P13942 AD000671.3-202ENST00000591091 1712 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
COL11A2P13942 MRPS30-202ENST00000507110 1678 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
COL11A2P13942 LRRC38-201ENST00000376085 2209 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
COL11A2P13942 PDIA3P1-201ENST00000471856 1510 ntBASIC20.15■□□□□ 0.82
COL11A2P13942 CD300LG-206ENST00000588884 1459 ntAPPRIS ALT2 TSL 2 BASIC20.15■□□□□ 0.82
COL11A2P13942 SPSB1-201ENST00000328089 3120 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
COL11A2P13942 HNRNPM-217ENST00000620401 2458 ntAPPRIS ALT2 TSL 1 (best) BASIC20.15■□□□□ 0.82
COL11A2P13942 TVP23C-204ENST00000438826 1852 ntAPPRIS ALT1 TSL 1 (best) BASIC20.15■□□□□ 0.82
COL11A2P13942 PRPS2-203ENST00000398491 1348 ntAPPRIS ALT1 TSL 1 (best) BASIC20.15■□□□□ 0.82
COL11A2P13942 WLS-205ENST00000370976 2332 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
COL11A2P13942 PLAC9-201ENST00000372263 785 ntAPPRIS P2 TSL 1 (best) BASIC20.15■□□□□ 0.82
COL11A2P13942 DIRC3-201ENST00000423123 552 ntAPPRIS P1 TSL 4 BASIC20.15■□□□□ 0.82
COL11A2P13942 SLC30A5-203ENST00000502979 681 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
COL11A2P13942 STARD4-205ENST00000505803 803 ntAPPRIS P1 TSL 2 BASIC20.15■□□□□ 0.82
COL11A2P13942 STARD4-207ENST00000509887 1186 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
COL11A2P13942 SDHAP3-202ENST00000515467 728 ntBASIC20.15■□□□□ 0.82
COL11A2P13942 CD63-208ENST00000549117 1233 ntAPPRIS P1 TSL 3 BASIC20.15■□□□□ 0.82
COL11A2P13942 AC087612.1-201ENST00000560238 658 ntTSL 5 BASIC20.15■□□□□ 0.82
COL11A2P13942 IL32-235ENST00000613483 1033 ntAPPRIS ALT2 TSL 5 BASIC20.15■□□□□ 0.82
COL11A2P13942 OR2T27-203ENST00000641652 1285 ntAPPRIS P1 BASIC20.15■□□□□ 0.82
COL11A2P13942 DNAJA3-203ENST00000431375 2294 ntTSL 2 BASIC20.15■□□□□ 0.82
COL11A2P13942 BVES-202ENST00000336775 1663 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
COL11A2P13942 CD8A-202ENST00000352580 1977 ntAPPRIS ALT2 TSL 2 BASIC20.15■□□□□ 0.82
COL11A2P13942 SNX16-201ENST00000345957 1853 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.82
COL11A2P13942 GSKIP-205ENST00000555181 2218 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.82
COL11A2P13942 CPT2-207ENST00000636867 2643 ntTSL 5 BASIC20.14■□□□□ 0.82
COL11A2P13942 SELENBP1-201ENST00000368868 1752 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.82
COL11A2P13942 KRT5-201ENST00000252242 2531 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.82
COL11A2P13942 RABGGTA-201ENST00000216840 2088 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
COL11A2P13942 NEU1-206ENST00000375631 2045 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
COL11A2P13942 TXNRD2-218ENST00000542719 2024 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
COL11A2P13942 RNF146-203ENST00000368314 2369 ntAPPRIS ALT1 TSL 2 BASIC20.14■□□□□ 0.81
COL11A2P13942 RBM24-203ENST00000425446 1034 ntTSL 3 BASIC20.14■□□□□ 0.81
COL11A2P13942 RHOA-206ENST00000454011 889 ntTSL 2 BASIC20.14■□□□□ 0.81
COL11A2P13942 LINC01605-204ENST00000522718 1093 ntTSL 3 BASIC20.14■□□□□ 0.81
COL11A2P13942 C11orf98-201ENST00000524958 654 ntAPPRIS P1 TSL 2 BASIC20.14■□□□□ 0.81
COL11A2P13942 RORA-AS1-205ENST00000559824 761 ntTSL 3 BASIC20.14■□□□□ 0.81
COL11A2P13942 TECR-207ENST00000596073 1170 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
COL11A2P13942 TECR-220ENST00000600083 1204 ntTSL 2 BASIC20.14■□□□□ 0.81
COL11A2P13942 TMEM261P1-201ENST00000604899 340 ntBASIC20.14■□□□□ 0.81
COL11A2P13942 AC113189.4-201ENST00000575331 5553 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
COL11A2P13942 HS3ST2-201ENST00000261374 2314 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
COL11A2P13942 USP27X-AS1-201ENST00000437322 2175 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
COL11A2P13942 HOXC5-201ENST00000312492 1805 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
COL11A2P13942 MAFF-201ENST00000338483 2490 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
COL11A2P13942 RAX2-201ENST00000555633 2414 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
COL11A2P13942 PCDHB17P-201ENST00000539533 2393 ntBASIC20.14■□□□□ 0.81
COL11A2P13942 METRN-204ENST00000568223 3325 ntAPPRIS P2 TSL 1 (best) BASIC20.14■□□□□ 0.81
COL11A2P13942 TBP-206ENST00000540980 1701 ntAPPRIS ALT2 TSL 2 BASIC20.14■□□□□ 0.81
COL11A2P13942 BEGAIN-211ENST00000637646 2911 ntTSL 5 BASIC20.14■□□□□ 0.81
COL11A2P13942 NPBWR2-201ENST00000369768 1352 ntAPPRIS P1 BASIC20.14■□□□□ 0.81
COL11A2P13942 FIBIN-201ENST00000318627 1938 ntAPPRIS P1 BASIC20.14■□□□□ 0.81
COL11A2P13942 TMEM91-202ENST00000356385 944 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
COL11A2P13942 EFNA4-201ENST00000359751 1096 ntAPPRIS ALT2 TSL 1 (best) BASIC20.13■□□□□ 0.81
COL11A2P13942 GBGT1-202ENST00000372038 847 ntTSL 3 BASIC20.13■□□□□ 0.81
COL11A2P13942 AL162431.1-201ENST00000434447 543 ntTSL 3 BASIC20.13■□□□□ 0.81
COL11A2P13942 AL355994.2-201ENST00000447882 704 ntBASIC20.13■□□□□ 0.81
COL11A2P13942 SPDYE16-201ENST00000515340 858 ntAPPRIS ALT2 TSL 5 BASIC20.13■□□□□ 0.81
COL11A2P13942 CNOT8-210ENST00000519404 945 ntTSL 2 BASIC20.13■□□□□ 0.81
COL11A2P13942 CNOT8-214ENST00000520671 923 ntTSL 2 BASIC20.13■□□□□ 0.81
COL11A2P13942 CNOT8-218ENST00000521583 1151 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
COL11A2P13942 TGIF2-C20orf24-201ENST00000558530 918 ntAPPRIS P1 TSL 3 BASIC20.13■□□□□ 0.81
COL11A2P13942 C19orf53-206ENST00000593274 491 ntTSL 2 BASIC20.13■□□□□ 0.81
Retrieved 100 of 98,524 protein–RNA pairs in 32.7 ms