Protein–RNA interactions for Protein: P12830

CDH1, Cadherin-1, humanhuman

Predictions only

Length 882 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH1P12830 ATP6V0E2-201ENST00000421974 2605 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
CDH1P12830 DUSP8-202ENST00000397374 4480 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
CDH1P12830 SULT1A2-204ENST00000533150 1991 ntTSL 2 BASIC16.41■□□□□ 0.22
CDH1P12830 AC078925.2-201ENST00000624013 1973 ntBASIC16.41■□□□□ 0.22
CDH1P12830 GHSR-201ENST00000241256 1172 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
CDH1P12830 LCE1F-201ENST00000334371 357 ntAPPRIS P1 BASIC16.41■□□□□ 0.22
CDH1P12830 MRPS15-201ENST00000373116 1006 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
CDH1P12830 HDAC8-206ENST00000373571 2133 ntTSL 5 BASIC16.41■□□□□ 0.22
CDH1P12830 CSF3-203ENST00000394148 622 ntTSL 3 BASIC16.41■□□□□ 0.22
CDH1P12830 AC087163.2-201ENST00000457299 853 ntBASIC16.41■□□□□ 0.22
CDH1P12830 NDUFB2-209ENST00000472695 503 ntTSL 5 BASIC16.41■□□□□ 0.22
CDH1P12830 AC093909.1-201ENST00000504731 1122 ntBASIC16.41■□□□□ 0.22
CDH1P12830 PENK-208ENST00000523051 772 ntTSL 5 BASIC16.41■□□□□ 0.22
CDH1P12830 SPCS2-207ENST00000530257 612 ntTSL 3 BASIC16.41■□□□□ 0.22
CDH1P12830 ZBP1-208ENST00000541799 1041 ntAPPRIS ALT2 TSL 5 BASIC16.41■□□□□ 0.22
CDH1P12830 UBE2Q2P1-205ENST00000559871 534 ntTSL 5 BASIC16.41■□□□□ 0.22
CDH1P12830 LITAF-211ENST00000572255 516 ntTSL 4 BASIC16.41■□□□□ 0.22
CDH1P12830 LITAF-215ENST00000574763 717 ntAPPRIS P1 TSL 3 BASIC16.41■□□□□ 0.22
CDH1P12830 CIRBP-235ENST00000591935 746 ntAPPRIS ALT1 TSL 3 BASIC16.41■□□□□ 0.22
CDH1P12830 TMEM178A-206ENST00000618232 1286 ntTSL 5 BASIC16.41■□□□□ 0.22
CDH1P12830 HIST1H2AK-201ENST00000618958 393 ntAPPRIS P1 BASIC16.41■□□□□ 0.22
CDH1P12830 AC116407.3-201ENST00000623905 1129 ntBASIC16.41■□□□□ 0.22
CDH1P12830 SURF4-208ENST00000613129 3148 ntTSL 2 BASIC16.41■□□□□ 0.22
CDH1P12830 SATB1-201ENST00000338745 7810 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
CDH1P12830 SLC8A3-202ENST00000356921 5250 ntAPPRIS P3 TSL 1 (best) BASIC16.41■□□□□ 0.22
CDH1P12830 NR4A2-203ENST00000409108 1735 ntTSL 5 BASIC16.41■□□□□ 0.22
CDH1P12830 EVA1A-205ENST00000410113 1747 ntAPPRIS P2 TSL 3 BASIC16.41■□□□□ 0.22
CDH1P12830 ZNF232-201ENST00000250076 2179 ntAPPRIS P3 TSL 5 BASIC16.41■□□□□ 0.22
CDH1P12830 ATP2C1-218ENST00000510168 5067 ntAPPRIS ALT1 TSL 5 BASIC16.41■□□□□ 0.22
CDH1P12830 AQP1-204ENST00000441328 2487 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
CDH1P12830 ABCF3-203ENST00000429586 2624 ntAPPRIS P2 TSL 1 (best) BASIC16.41■□□□□ 0.22
CDH1P12830 SLC27A6-201ENST00000262462 3219 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
CDH1P12830 MAP3K9-206ENST00000555993 4449 ntAPPRIS P3 TSL 1 (best) BASIC16.41■□□□□ 0.22
CDH1P12830 CPEB2-AS1-201ENST00000500394 1630 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
CDH1P12830 NRG1-216ENST00000523079 2359 ntTSL 2 BASIC16.41■□□□□ 0.22
CDH1P12830 GALNT18-201ENST00000227756 2504 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
CDH1P12830 GATA3-201ENST00000346208 2654 ntAPPRIS P3 TSL 1 (best) BASIC16.41■□□□□ 0.22
CDH1P12830 MAP3K9-201ENST00000381250 4025 ntAPPRIS ALT2 TSL 5 BASIC16.41■□□□□ 0.22
CDH1P12830 RNF31-201ENST00000324103 3627 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
CDH1P12830 TRIM39-201ENST00000376656 3338 ntAPPRIS P4 TSL 2 BASIC16.4■□□□□ 0.22
CDH1P12830 MIB2-217ENST00000504599 3311 ntAPPRIS ALT2 TSL 2 BASIC16.4■□□□□ 0.22
CDH1P12830 MAP3K20-203ENST00000409176 2572 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
CDH1P12830 GULP1-206ENST00000409830 1376 ntAPPRIS P3 TSL 1 (best) BASIC16.4■□□□□ 0.22
CDH1P12830 KIF13B-206ENST00000524189 8745 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
CDH1P12830 SESN1-204ENST00000436639 3509 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
CDH1P12830 PPP1R3G-201ENST00000405617 4907 ntAPPRIS P1 BASIC16.4■□□□□ 0.22
CDH1P12830 SLC3A2-203ENST00000377890 2161 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
CDH1P12830 POC1A-201ENST00000296484 1898 ntAPPRIS P3 TSL 1 (best) BASIC16.4■□□□□ 0.22
CDH1P12830 WDR74-204ENST00000525239 1736 ntAPPRIS P1 TSL 2 BASIC16.4■□□□□ 0.22
CDH1P12830 AMOTL2-211ENST00000513145 2653 ntAPPRIS ALT1 TSL 1 (best) BASIC16.4■□□□□ 0.22
CDH1P12830 NFKBIA-201ENST00000216797 1558 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
CDH1P12830 CTPS2-201ENST00000359276 3629 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
CDH1P12830 TFF3-201ENST00000291525 407 ntAPPRIS ALT2 TSL 5 BASIC16.4■□□□□ 0.22
CDH1P12830 AC098831.1-202ENST00000438821 336 ntBASIC16.4■□□□□ 0.22
CDH1P12830 CCNG1-208ENST00000510664 994 ntTSL 5 BASIC16.4■□□□□ 0.22
CDH1P12830 AC008878.4-201ENST00000602083 293 ntTSL 5 BASIC16.4■□□□□ 0.22
CDH1P12830 AC008667.4-201ENST00000607370 168 ntBASIC16.4■□□□□ 0.22
CDH1P12830 PGM5P2-202ENST00000637225 1043 ntBASIC16.4■□□□□ 0.22
CDH1P12830 AF228730.7-201ENST00000641842 219 ntBASIC16.4■□□□□ 0.22
CDH1P12830 TEX19-201ENST00000333437 1936 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
CDH1P12830 CALD1-204ENST00000417172 1915 ntTSL 5 BASIC16.4■□□□□ 0.22
CDH1P12830 DGKZ-201ENST00000318201 3213 ntTSL 2 BASIC16.4■□□□□ 0.22
CDH1P12830 RNF216P1-203ENST00000404404 2427 ntBASIC16.4■□□□□ 0.22
CDH1P12830 GCK-209ENST00000616242 2260 ntTSL 5 BASIC16.4■□□□□ 0.22
CDH1P12830 ANKRD24-202ENST00000318934 3906 ntAPPRIS P2 TSL 5 BASIC16.4■□□□□ 0.22
CDH1P12830 KLK3-201ENST00000326003 1463 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
CDH1P12830 FOS-208ENST00000555686 1496 ntTSL 2 BASIC16.4■□□□□ 0.22
CDH1P12830 ULBP2-201ENST00000367351 1349 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
CDH1P12830 LINC02415-201ENST00000508505 1315 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
CDH1P12830 RRM2-202ENST00000360566 3673 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
CDH1P12830 SCAP-201ENST00000265565 4394 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
CDH1P12830 DPY19L2P4-202ENST00000497063 2018 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
CDH1P12830 ARID1A-205ENST00000457599 6268 ntAPPRIS ALT2 TSL 5 BASIC16.4■□□□□ 0.22
CDH1P12830 PDPK2P-201ENST00000382326 2387 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
CDH1P12830 GAPDH-201ENST00000229239 1875 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.22
CDH1P12830 NUP50-202ENST00000396096 1895 ntTSL 1 (best) BASIC16.39■□□□□ 0.22
CDH1P12830 ASAP3-212ENST00000618240 2226 ntTSL 5 BASIC16.39■□□□□ 0.22
CDH1P12830 ZNF517-202ENST00000525105 1383 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
CDH1P12830 THNSL2-202ENST00000343544 2052 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
CDH1P12830 RAPGEFL1-209ENST00000544503 2079 ntTSL 2 BASIC16.39■□□□□ 0.21
CDH1P12830 AC006449.5-201ENST00000610658 2098 ntBASIC16.39■□□□□ 0.21
CDH1P12830 TXNDC11-202ENST00000356957 3178 ntAPPRIS ALT2 TSL 1 (best) BASIC16.39■□□□□ 0.21
CDH1P12830 PPP1R3E-201ENST00000452015 4773 ntAPPRIS P1 TSL 2 BASIC16.39■□□□□ 0.21
CDH1P12830 CRELD1-206ENST00000452070 1778 ntAPPRIS P1 TSL 2 BASIC16.39■□□□□ 0.21
CDH1P12830 CTD-3080P12.3-203ENST00000514376 1757 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
CDH1P12830 ZADH2-201ENST00000322342 7732 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
CDH1P12830 TSPAN3-201ENST00000267970 6467 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
CDH1P12830 GML-201ENST00000220940 723 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
CDH1P12830 MSANTD3-201ENST00000374885 786 ntTSL 2 BASIC16.39■□□□□ 0.21
CDH1P12830 TSTD1-204ENST00000423014 593 ntAPPRIS ALT2 TSL 2 BASIC16.39■□□□□ 0.21
CDH1P12830 AC079776.4-201ENST00000511039 504 ntBASIC16.39■□□□□ 0.21
CDH1P12830 IGHV3-65-201ENST00000523210 341 ntBASIC16.39■□□□□ 0.21
CDH1P12830 BAX-213ENST00000539787 458 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
CDH1P12830 AK2-210ENST00000548033 936 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
CDH1P12830 ADAM10-217ENST00000561288 583 ntTSL 3 BASIC16.39■□□□□ 0.21
CDH1P12830 GABARAP-204ENST00000571253 837 ntTSL 2 BASIC16.39■□□□□ 0.21
CDH1P12830 DEF8-228ENST00000610455 816 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
CDH1P12830 FOXP1-223ENST00000622151 429 ntTSL 3 BASIC16.39■□□□□ 0.21
CDH1P12830 HOXC5-201ENST00000312492 1805 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
CDH1P12830 PUF60-201ENST00000313352 1804 ntAPPRIS ALT1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Retrieved 100 of 98,524 protein–RNA pairs in 29.5 ms