Protein–RNA interactions for Protein: P12107

COL11A1, Collagen alpha-1(XI) chain, humanhuman

Predicted RBP Predictions only

Length 1,806 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL11A1P12107 FOLR3-204ENST00000611028 820 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
COL11A1P12107 PROC-201ENST00000234071 1773 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
COL11A1P12107 GTPBP8-202ENST00000383677 1787 ntTSL 3 BASIC18.81■□□□□ 0.6
COL11A1P12107 ADCYAP1R1-203ENST00000409363 1889 ntAPPRIS ALT2 TSL 1 (best) BASIC18.81■□□□□ 0.6
COL11A1P12107 UBAP1L-201ENST00000502113 1381 ntAPPRIS P1 TSL 5 BASIC18.81■□□□□ 0.6
COL11A1P12107 LMBR1L-204ENST00000547382 2235 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
COL11A1P12107 ACY3-201ENST00000255082 1300 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
COL11A1P12107 AKR7L-202ENST00000429712 1313 ntAPPRIS P5 TSL 1 (best) BASIC18.81■□□□□ 0.6
COL11A1P12107 IDH3G-212ENST00000619865 1339 ntTSL 5 BASIC18.81■□□□□ 0.6
COL11A1P12107 TOM1L2-209ENST00000540946 1420 ntTSL 2 BASIC18.81■□□□□ 0.6
COL11A1P12107 RNF121-203ENST00000393713 2132 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
COL11A1P12107 KCTD15-202ENST00000430256 2555 ntAPPRIS P1 TSL 2 BASIC18.81■□□□□ 0.6
COL11A1P12107 TAF1C-222ENST00000570117 2349 ntAPPRIS ALT2 TSL 2 BASIC18.81■□□□□ 0.6
COL11A1P12107 FTSJ1-201ENST00000019019 1986 ntAPPRIS ALT1 TSL 2 BASIC18.81■□□□□ 0.6
COL11A1P12107 HM13-202ENST00000340852 1606 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
COL11A1P12107 SS18L2-201ENST00000011691 781 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
COL11A1P12107 LRP3-201ENST00000253193 3807 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
COL11A1P12107 UBB-201ENST00000302182 1225 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
COL11A1P12107 TOMM5-201ENST00000321301 751 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
COL11A1P12107 SMAGP-202ENST00000398453 1062 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
COL11A1P12107 RCAN3-204ENST00000425530 997 ntTSL 5 BASIC18.81■□□□□ 0.6
COL11A1P12107 SLC30A5-203ENST00000502979 681 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
COL11A1P12107 IFITM2-204ENST00000533141 588 ntAPPRIS ALT2 TSL 4 BASIC18.81■□□□□ 0.6
COL11A1P12107 PUDP-206ENST00000540122 825 ntTSL 2 BASIC18.81■□□□□ 0.6
COL11A1P12107 AC138207.8-201ENST00000579692 739 ntTSL 3 BASIC18.81■□□□□ 0.6
COL11A1P12107 AL662799.1-202ENST00000614205 422 ntBASIC18.81■□□□□ 0.6
COL11A1P12107 CCKAR-201ENST00000295589 1720 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
COL11A1P12107 GSTO2-203ENST00000450629 1391 ntTSL 5 BASIC18.81■□□□□ 0.6
COL11A1P12107 NTNG2-202ENST00000393229 4792 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
COL11A1P12107 TGIF1-205ENST00000401449 1670 ntTSL 2 BASIC18.8■□□□□ 0.6
COL11A1P12107 TCP1-203ENST00000420894 1671 ntTSL 5 BASIC18.8■□□□□ 0.6
COL11A1P12107 ACVR1B-201ENST00000257963 4563 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
COL11A1P12107 CREB3L1-206ENST00000621158 2687 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
COL11A1P12107 DCST1-202ENST00000368419 2207 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
COL11A1P12107 PCGF3-213ENST00000620529 1899 ntBASIC18.8■□□□□ 0.6
COL11A1P12107 PDX1-201ENST00000381033 2501 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
COL11A1P12107 IMPDH1P4-201ENST00000445028 1534 ntBASIC18.8■□□□□ 0.6
COL11A1P12107 CLCNKB-204ENST00000619181 1544 ntTSL 5 BASIC18.8■□□□□ 0.6
COL11A1P12107 TSC22D3-203ENST00000372383 2266 ntTSL 2 BASIC18.8■□□□□ 0.6
COL11A1P12107 RNF183-202ENST00000416588 849 ntAPPRIS P1 TSL 3 BASIC18.8■□□□□ 0.6
COL11A1P12107 ZNF710-AS1-201ENST00000558334 1168 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
COL11A1P12107 DUSP26-203ENST00000523956 1373 ntAPPRIS P1 TSL 5 BASIC18.8■□□□□ 0.6
COL11A1P12107 IL11RA-215ENST00000602473 1388 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
COL11A1P12107 IL3RA-202ENST00000381469 1476 ntTSL 5 BASIC18.8■□□□□ 0.6
COL11A1P12107 HLA-A-202ENST00000376806 1854 ntBASIC18.8■□□□□ 0.6
COL11A1P12107 OBSL1-201ENST00000289656 2274 ntTSL 5 BASIC18.8■□□□□ 0.6
COL11A1P12107 ORAOV1-206ENST00000536870 2274 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
COL11A1P12107 ZSCAN10-202ENST00000538082 2350 ntTSL 4 BASIC18.8■□□□□ 0.6
COL11A1P12107 IFFO1-201ENST00000336604 2686 ntAPPRIS P3 TSL 1 (best) BASIC18.8■□□□□ 0.6
COL11A1P12107 CPVL-202ENST00000396276 1739 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
COL11A1P12107 C19orf54-203ENST00000470681 2521 ntTSL 2 BASIC18.8■□□□□ 0.6
COL11A1P12107 ZNF213-202ENST00000416391 2996 ntAPPRIS P1 TSL 5 BASIC18.79■□□□□ 0.6
COL11A1P12107 MRPL53-201ENST00000258105 1162 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
COL11A1P12107 CD28-203ENST00000458610 705 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
COL11A1P12107 FKBP11-208ENST00000550765 1030 ntAPPRIS P3 TSL 1 (best) BASIC18.79■□□□□ 0.6
COL11A1P12107 AL928654.4-206ENST00000551180 980 ntAPPRIS ALT2 TSL 5 BASIC18.79■□□□□ 0.6
COL11A1P12107 DUSP13-214ENST00000607131 1019 ntAPPRIS P3 TSL 1 (best) BASIC18.79■□□□□ 0.6
COL11A1P12107 DRG1-201ENST00000331457 1746 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
COL11A1P12107 GABARAPL1-205ENST00000539170 1700 ntTSL 3 BASIC18.79■□□□□ 0.6
COL11A1P12107 MGAT3-201ENST00000341184 5062 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
COL11A1P12107 C9orf66-201ENST00000382387 2918 ntAPPRIS P1 BASIC18.79■□□□□ 0.6
COL11A1P12107 MPL-202ENST00000413998 1887 ntAPPRIS ALT2 TSL 1 (best) BASIC18.79■□□□□ 0.6
COL11A1P12107 MAPKAPK3-201ENST00000357955 2500 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
COL11A1P12107 ACRV1-201ENST00000315608 1042 ntAPPRIS ALT2 TSL 1 (best) BASIC18.79■□□□□ 0.6
COL11A1P12107 AC007388.1-210ENST00000415640 458 ntTSL 3 BASIC18.79■□□□□ 0.6
COL11A1P12107 AC098859.1-201ENST00000502915 1238 ntBASIC18.79■□□□□ 0.6
COL11A1P12107 AC020765.3-201ENST00000613051 740 ntBASIC18.79■□□□□ 0.6
COL11A1P12107 TVP23C-201ENST00000225576 1527 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
COL11A1P12107 DHX33-202ENST00000433302 2225 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
COL11A1P12107 TMEM161A-206ENST00000587583 1654 ntTSL 5 BASIC18.78■□□□□ 0.6
COL11A1P12107 TBX6-203ENST00000553607 2162 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
COL11A1P12107 TNRC18-202ENST00000399434 1459 ntTSL 2 BASIC18.78■□□□□ 0.6
COL11A1P12107 FFAR2-201ENST00000246549 2051 ntAPPRIS P1 BASIC18.78■□□□□ 0.6
COL11A1P12107 GNAS-212ENST00000371098 1719 ntTSL 5 BASIC18.78■□□□□ 0.6
COL11A1P12107 NOL4L-210ENST00000616976 1376 ntTSL 5 BASIC18.78■□□□□ 0.6
COL11A1P12107 RELA-227ENST00000615805 2236 ntTSL 5 BASIC18.78■□□□□ 0.6
COL11A1P12107 B3GNT8-201ENST00000321702 1874 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
COL11A1P12107 EBI3-201ENST00000221847 1186 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
COL11A1P12107 GFOD2-201ENST00000268797 2126 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
COL11A1P12107 OR52W1-201ENST00000311352 1114 ntAPPRIS P1 BASIC18.78■□□□□ 0.6
COL11A1P12107 C1QC-202ENST00000374639 1183 ntAPPRIS P1 TSL 2 BASIC18.78■□□□□ 0.6
COL11A1P12107 ARRB2-203ENST00000381488 1236 ntTSL 2 BASIC18.78■□□□□ 0.6
COL11A1P12107 LINC00475-203ENST00000417983 703 ntTSL 2 BASIC18.78■□□□□ 0.6
COL11A1P12107 RASL12-203ENST00000434605 982 ntTSL 2 BASIC18.78■□□□□ 0.6
COL11A1P12107 HLA-J-202ENST00000469281 1241 ntBASIC18.78■□□□□ 0.6
COL11A1P12107 KRBOX4-207ENST00000487081 1247 ntAPPRIS ALT2 TSL 1 (best) BASIC18.78■□□□□ 0.6
COL11A1P12107 SLC8B1-206ENST00000549069 1058 ntTSL 2 BASIC18.78■□□□□ 0.6
COL11A1P12107 COQ6-210ENST00000554920 649 ntTSL 3 BASIC18.78■□□□□ 0.6
COL11A1P12107 MAX-210ENST00000555419 765 ntTSL 5 BASIC18.78■□□□□ 0.6
COL11A1P12107 AC007431.3-201ENST00000623221 587 ntBASIC18.78■□□□□ 0.6
COL11A1P12107 FCHO1-201ENST00000252771 3118 ntAPPRIS P1 TSL 5 BASIC18.78■□□□□ 0.6
COL11A1P12107 FBXO4-201ENST00000281623 1682 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
COL11A1P12107 CABIN1-202ENST00000337989 2422 ntAPPRIS ALT2 TSL 1 (best) BASIC18.78■□□□□ 0.6
COL11A1P12107 PTPRO-209ENST00000543886 2070 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
COL11A1P12107 STAC3-206ENST00000554578 1580 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
COL11A1P12107 NFATC4-215ENST00000554661 2631 ntAPPRIS ALT2 TSL 1 (best) BASIC18.78■□□□□ 0.6
COL11A1P12107 THEM4-201ENST00000368814 2377 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
COL11A1P12107 PNPO-201ENST00000225573 2256 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
COL11A1P12107 FAM174A-201ENST00000312637 1356 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
COL11A1P12107 PPFIA1-202ENST00000389547 4133 ntAPPRIS ALT1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Retrieved 100 of 98,524 protein–RNA pairs in 64.1 ms