Protein–RNA interactions for Protein: P10747

CD28, T-cell-specific surface glycoprotein CD28, humanhuman

Predictions only

Length 220 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD28P10747 ADPGK-AS1-201ENST00000563592 2730 ntTSL 2 BASIC13.13□□□□□ -0.31
CD28P10747 CNST-202ENST00000366512 2422 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
CD28P10747 SKOR1-202ENST00000380035 3675 ntAPPRIS ALT2 TSL 5 BASIC13.13□□□□□ -0.31
CD28P10747 ANKHD1-202ENST00000297183 7606 ntTSL 5 BASIC13.13□□□□□ -0.31
CD28P10747 LRRC42-201ENST00000319223 1727 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
CD28P10747 STPG3-AS1-201ENST00000612170 1701 ntTSL 2 BASIC13.13□□□□□ -0.31
CD28P10747 RAB4B-EGLN2-201ENST00000594136 2554 ntAPPRIS P1 TSL 2 BASIC13.13□□□□□ -0.31
CD28P10747 PARVG-206ENST00000444313 3523 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
CD28P10747 SUFU-202ENST00000369902 5001 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
CD28P10747 PFN2-201ENST00000239940 2261 ntAPPRIS P3 TSL 1 (best) BASIC13.13□□□□□ -0.31
CD28P10747 KAT2A-201ENST00000225916 3109 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
CD28P10747 TIMM50-220ENST00000607714 1338 ntAPPRIS ALT2 TSL 1 (best) BASIC13.13□□□□□ -0.31
CD28P10747 BEST2-202ENST00000549706 2183 ntAPPRIS P1 TSL 5 BASIC13.13□□□□□ -0.31
CD28P10747 RTKN2-203ENST00000395260 2076 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
CD28P10747 RNPS1-203ENST00000397086 2069 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
CD28P10747 LINC01554-202ENST00000436592 2052 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
CD28P10747 PRSS36-201ENST00000268281 2840 ntAPPRIS P3 TSL 1 (best) BASIC13.12□□□□□ -0.31
CD28P10747 SCAI-202ENST00000373549 1968 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
CD28P10747 WDR25-202ENST00000402312 1969 ntAPPRIS P1 TSL 2 BASIC13.12□□□□□ -0.31
CD28P10747 RND2-202ENST00000587250 4147 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
CD28P10747 DENND3-201ENST00000262585 5438 ntAPPRIS P2 TSL 5 BASIC13.12□□□□□ -0.31
CD28P10747 CSAD-209ENST00000453446 1774 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
CD28P10747 POC1A-203ENST00000474012 1760 ntAPPRIS ALT2 TSL 2 BASIC13.12□□□□□ -0.31
CD28P10747 PHLDB1-202ENST00000361417 5753 ntAPPRIS P3 TSL 1 (best) BASIC13.12□□□□□ -0.31
CD28P10747 GSK3B-201ENST00000264235 7711 ntAPPRIS ALT1 TSL 1 (best) BASIC13.12□□□□□ -0.31
CD28P10747 TNFAIP1-202ENST00000544907 1656 ntTSL 2 BASIC13.12□□□□□ -0.31
CD28P10747 OLFM2-203ENST00000590841 1665 ntTSL 2 BASIC13.12□□□□□ -0.31
CD28P10747 TRAPPC2L-201ENST00000301021 2215 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
CD28P10747 BCL11A-201ENST00000335712 5942 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
CD28P10747 NRIP1-203ENST00000400202 7671 ntAPPRIS P1 TSL 5 BASIC13.12□□□□□ -0.31
CD28P10747 RPAP3-203ENST00000432584 2133 ntTSL 2 BASIC13.12□□□□□ -0.31
CD28P10747 KLK3-201ENST00000326003 1463 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
CD28P10747 LILRA6-201ENST00000245621 1395 ntAPPRIS ALT2 TSL 5 BASIC13.12□□□□□ -0.31
CD28P10747 KCNC2-203ENST00000393288 2485 ntAPPRIS ALT2 TSL 1 (best) BASIC13.12□□□□□ -0.31
CD28P10747 SELENBP1-204ENST00000426705 1928 ntTSL 2 BASIC13.12□□□□□ -0.31
CD28P10747 PROSER1-211ENST00000625998 5102 ntAPPRIS ALT2 TSL 5 BASIC13.12□□□□□ -0.31
CD28P10747 CYP2W1-202ENST00000340150 2361 ntTSL 2 BASIC13.12□□□□□ -0.31
CD28P10747 METTL26-202ENST00000338401 544 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
CD28P10747 SNHG11-201ENST00000359074 1031 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
CD28P10747 TSSC4-202ENST00000380992 992 ntAPPRIS ALT2 TSL 5 BASIC13.12□□□□□ -0.31
CD28P10747 CLTA-203ENST00000396603 1090 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
CD28P10747 FAM58DP-201ENST00000428076 619 ntBASIC13.12□□□□□ -0.31
CD28P10747 SLBP-205ENST00000488267 987 ntTSL 2 BASIC13.12□□□□□ -0.31
CD28P10747 VASH2-211ENST00000517399 1068 ntAPPRIS ALT1 TSL 1 (best) BASIC13.12□□□□□ -0.31
CD28P10747 IGHV3-62-201ENST00000520057 340 ntBASIC13.12□□□□□ -0.31
CD28P10747 TSFM-210ENST00000550559 897 ntTSL 5 BASIC13.12□□□□□ -0.31
CD28P10747 AC005759.1-201ENST00000594805 855 ntTSL 3 BASIC13.12□□□□□ -0.31
CD28P10747 Z92544.3-201ENST00000624747 417 ntBASIC13.12□□□□□ -0.31
CD28P10747 ST6GALNAC6-201ENST00000291839 2280 ntAPPRIS P3 TSL 1 (best) BASIC13.12□□□□□ -0.31
CD28P10747 DYSF-207ENST00000409762 6727 ntAPPRIS ALT2 TSL 1 (best) BASIC13.12□□□□□ -0.31
CD28P10747 DYSF-211ENST00000429174 6739 ntAPPRIS ALT2 TSL 1 (best) BASIC13.12□□□□□ -0.31
CD28P10747 AC093525.9-201ENST00000624961 1746 ntBASIC13.12□□□□□ -0.31
CD28P10747 EPHA10-201ENST00000319637 2050 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
CD28P10747 GABRB2-202ENST00000353437 1963 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
CD28P10747 HMGA2-210ENST00000541363 8094 ntAPPRIS ALT1 TSL 1 (best) BASIC13.12□□□□□ -0.31
CD28P10747 CDIPT-209ENST00000569956 1532 ntAPPRIS P1 TSL 5 BASIC13.12□□□□□ -0.31
CD28P10747 AL139398.1-201ENST00000638795 1529 ntTSL 5 BASIC13.12□□□□□ -0.31
CD28P10747 FAM69C-201ENST00000343998 3671 ntAPPRIS P1 TSL 5 BASIC13.12□□□□□ -0.31
CD28P10747 ECE2-205ENST00000404464 3229 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
CD28P10747 ZNF140-210ENST00000544426 2340 ntTSL 2 BASIC13.12□□□□□ -0.31
CD28P10747 GNAS-203ENST00000306120 1878 ntBASIC13.12□□□□□ -0.31
CD28P10747 AMHR2-202ENST00000379791 1437 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
CD28P10747 ZNF211-203ENST00000299871 2577 ntAPPRIS ALT2 TSL 3 BASIC13.12□□□□□ -0.31
CD28P10747 AKAP8P1-201ENST00000434743 1349 ntBASIC13.12□□□□□ -0.31
CD28P10747 SLC30A1-201ENST00000367001 5474 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
CD28P10747 EMILIN3-201ENST00000332312 3796 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
CD28P10747 SCAP-201ENST00000265565 4394 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
CD28P10747 CAMKV-204ENST00000466940 1475 ntTSL 2 BASIC13.11□□□□□ -0.31
CD28P10747 HMGXB3-202ENST00000503427 5275 ntAPPRIS ALT2 TSL 5 BASIC13.11□□□□□ -0.31
CD28P10747 DVL2-201ENST00000005340 3018 ntAPPRIS P2 TSL 1 (best) BASIC13.11□□□□□ -0.31
CD28P10747 AP003071.5-201ENST00000641568 2695 ntAPPRIS P1 BASIC13.11□□□□□ -0.31
CD28P10747 DNAJC10-210ENST00000616986 5783 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
CD28P10747 GGT5-201ENST00000263112 2334 ntAPPRIS ALT2 TSL 1 (best) BASIC13.11□□□□□ -0.31
CD28P10747 ZFPL1-201ENST00000294258 1371 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
CD28P10747 DUS3L-202ENST00000320699 1355 ntAPPRIS ALT2 TSL 1 (best) BASIC13.11□□□□□ -0.31
CD28P10747 HNRNPUL2-BSCL2-201ENST00000403734 4001 ntAPPRIS P1 TSL 2 BASIC13.11□□□□□ -0.31
CD28P10747 FAM222A-201ENST00000358906 2731 ntAPPRIS P1 TSL 5 BASIC13.11□□□□□ -0.31
CD28P10747 PRX-201ENST00000291825 5502 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
CD28P10747 NKAIN2-201ENST00000368416 1106 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
CD28P10747 UGGT2-202ENST00000376714 1233 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
CD28P10747 DANCR-201ENST00000411630 904 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
CD28P10747 SPDYE2-202ENST00000432940 1209 ntAPPRIS P2 TSL 1 (best) BASIC13.11□□□□□ -0.31
CD28P10747 SPCS2P4-201ENST00000436160 681 ntBASIC13.11□□□□□ -0.31
CD28P10747 SPDYE2B-201ENST00000436228 1209 ntAPPRIS P2 TSL 1 (best) BASIC13.11□□□□□ -0.31
CD28P10747 MSLNL-201ENST00000442466 2109 ntAPPRIS P1 TSL 5 BASIC13.11□□□□□ -0.31
CD28P10747 FOLR3-201ENST00000442948 805 ntTSL 5 BASIC13.11□□□□□ -0.31
CD28P10747 CTDSP1-204ENST00000443891 1109 ntTSL 3 BASIC13.11□□□□□ -0.31
CD28P10747 AL391845.1-202ENST00000449154 437 ntTSL 3 BASIC13.11□□□□□ -0.31
CD28P10747 ITGA9-AS1-209ENST00000450990 562 ntTSL 4 BASIC13.11□□□□□ -0.31
CD28P10747 SPDYE5-201ENST00000455862 1209 ntAPPRIS P2 TSL 1 (best) BASIC13.11□□□□□ -0.31
CD28P10747 AL355140.1-201ENST00000457328 398 ntTSL 5 BASIC13.11□□□□□ -0.31
CD28P10747 AC069335.1-201ENST00000489972 472 ntBASIC13.11□□□□□ -0.31
CD28P10747 PTHLH-207ENST00000539239 890 ntAPPRIS ALT1 TSL 5 BASIC13.11□□□□□ -0.31
CD28P10747 GALNT9-208ENST00000541995 1001 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
CD28P10747 VPS29-207ENST00000549970 818 ntTSL 3 BASIC13.11□□□□□ -0.31
CD28P10747 FAM177A1-207ENST00000554052 540 ntAPPRIS ALT2 TSL 2 BASIC13.11□□□□□ -0.31
CD28P10747 SPCS2P1-201ENST00000561636 679 ntBASIC13.11□□□□□ -0.31
CD28P10747 PMF1-BGLAP-204ENST00000567140 655 ntTSL 3 BASIC13.11□□□□□ -0.31
CD28P10747 KRT16P2-202ENST00000579062 563 ntTSL 4 BASIC13.11□□□□□ -0.31
CD28P10747 WT1-AS_2.1-201ENST00000613208 137 ntBASIC13.11□□□□□ -0.31
Retrieved 100 of 98,524 protein–RNA pairs in 51.1 ms