Protein–RNA interactions for Protein: P0C7X3

CCNYL3, Putative cyclin-Y-like protein 3, humanhuman

Predictions only

Length 344 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCNYL3P0C7X3 TSC2-207ENST00000439673 5287 ntAPPRIS ALT2 TSL 2 BASIC16.27■□□□□ 0.2
CCNYL3P0C7X3 LYPLA2-205ENST00000374514 1810 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
CCNYL3P0C7X3 NAT6-205ENST00000443842 1820 ntAPPRIS ALT2 TSL 2 BASIC16.27■□□□□ 0.2
CCNYL3P0C7X3 SLC9A2-201ENST00000233969 5410 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
CCNYL3P0C7X3 PHF20L1-203ENST00000337920 2311 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
CCNYL3P0C7X3 TCEAL3-201ENST00000243286 1124 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
CCNYL3P0C7X3 ARMC12-201ENST00000288065 1169 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
CCNYL3P0C7X3 RPS17-201ENST00000330244 592 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
CCNYL3P0C7X3 CKLF-204ENST00000362093 412 ntAPPRIS ALT2 TSL 1 (best) BASIC16.27■□□□□ 0.2
CCNYL3P0C7X3 SPDYC-201ENST00000377185 991 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
CCNYL3P0C7X3 APOBEC3H-202ENST00000401756 1023 ntAPPRIS ALT2 TSL 3 BASIC16.27■□□□□ 0.2
CCNYL3P0C7X3 AL122058.1-202ENST00000426580 252 ntTSL 3 BASIC16.27■□□□□ 0.2
CCNYL3P0C7X3 AP000695.1-201ENST00000429588 893 ntTSL 3 BASIC16.27■□□□□ 0.2
CCNYL3P0C7X3 DARS-AS1-203ENST00000438432 768 ntTSL 3 BASIC16.27■□□□□ 0.2
CCNYL3P0C7X3 AC130456.4-201ENST00000568635 665 ntTSL 2 BASIC16.27■□□□□ 0.2
CCNYL3P0C7X3 CROCCP3-203ENST00000589964 255 ntTSL 3 BASIC16.27■□□□□ 0.2
CCNYL3P0C7X3 HECTD1-201ENST00000399332 9134 ntAPPRIS P1 TSL 5 BASIC16.27■□□□□ 0.2
CCNYL3P0C7X3 SEMA3B-204ENST00000433753 2755 ntAPPRIS ALT1 TSL 1 (best) BASIC16.27■□□□□ 0.2
CCNYL3P0C7X3 GXYLT2-201ENST00000389617 3260 ntAPPRIS P1 TSL 5 BASIC16.27■□□□□ 0.2
CCNYL3P0C7X3 IL12RB2-202ENST00000371000 2454 ntTSL 2 BASIC16.27■□□□□ 0.19
CCNYL3P0C7X3 DAPK2-202ENST00000457488 1741 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
CCNYL3P0C7X3 TFAP2D-201ENST00000008391 1711 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
CCNYL3P0C7X3 SNX17-210ENST00000537606 2400 ntTSL 2 BASIC16.27■□□□□ 0.19
CCNYL3P0C7X3 KCNJ2-AS1-201ENST00000590966 2442 ntBASIC16.27■□□□□ 0.19
CCNYL3P0C7X3 NODAL-201ENST00000287139 1665 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
CCNYL3P0C7X3 TLE2-217ENST00000590536 2344 ntAPPRIS ALT2 TSL 1 (best) BASIC16.27■□□□□ 0.19
CCNYL3P0C7X3 NAP1L4-201ENST00000380542 2511 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
CCNYL3P0C7X3 AHDC1-202ENST00000374011 6438 ntAPPRIS P1 TSL 5 BASIC16.26■□□□□ 0.19
CCNYL3P0C7X3 VGLL4-211ENST00000430365 1377 ntAPPRIS P1 TSL 2 BASIC16.26■□□□□ 0.19
CCNYL3P0C7X3 CREBBP-201ENST00000262367 10803 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
CCNYL3P0C7X3 SCP2-202ENST00000371513 2003 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
CCNYL3P0C7X3 NLRP6-203ENST00000534750 2936 ntAPPRIS ALT2 TSL 2 BASIC16.26■□□□□ 0.19
CCNYL3P0C7X3 DNM1-216ENST00000634267 2909 ntTSL 5 BASIC16.26■□□□□ 0.19
CCNYL3P0C7X3 DHCR7-201ENST00000355527 2666 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
CCNYL3P0C7X3 SEPT9-202ENST00000423034 3984 ntAPPRIS ALT1 TSL 1 (best) BASIC16.26■□□□□ 0.19
CCNYL3P0C7X3 EIF4A1-203ENST00000577269 1319 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
CCNYL3P0C7X3 ZC3H7B-201ENST00000352645 5909 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
CCNYL3P0C7X3 SLK-201ENST00000335753 7673 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
CCNYL3P0C7X3 GDF6-201ENST00000287020 3701 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
CCNYL3P0C7X3 LITAF-209ENST00000571688 2632 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
CCNYL3P0C7X3 TUSC3-204ENST00000506802 1546 ntTSL 5 BASIC16.26■□□□□ 0.19
CCNYL3P0C7X3 DDX28-201ENST00000332395 2169 ntAPPRIS P1 BASIC16.26■□□□□ 0.19
CCNYL3P0C7X3 AC003002.1-202ENST00000596755 1743 ntAPPRIS P1 BASIC16.26■□□□□ 0.19
CCNYL3P0C7X3 TMEM59L-205ENST00000600490 1717 ntAPPRIS P1 TSL 5 BASIC16.26■□□□□ 0.19
CCNYL3P0C7X3 NCOA5-201ENST00000290231 3220 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
CCNYL3P0C7X3 RASA2-202ENST00000452898 2562 ntAPPRIS ALT2 TSL 5 BASIC16.26■□□□□ 0.19
CCNYL3P0C7X3 CACNA1G-202ENST00000354983 8138 ntAPPRIS ALT2 TSL 5 BASIC16.26■□□□□ 0.19
CCNYL3P0C7X3 TK2-201ENST00000299697 5114 ntAPPRIS P3 TSL 1 (best) BASIC16.26■□□□□ 0.19
CCNYL3P0C7X3 PRLH-201ENST00000165524 264 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
CCNYL3P0C7X3 BTBD3-201ENST00000254977 4686 ntAPPRIS ALT1 TSL 2 BASIC16.26■□□□□ 0.19
CCNYL3P0C7X3 ADRB3-201ENST00000345060 2950 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
CCNYL3P0C7X3 RPL36-201ENST00000347512 707 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
CCNYL3P0C7X3 ANKRD54-202ENST00000406423 954 ntTSL 3 BASIC16.26■□□□□ 0.19
CCNYL3P0C7X3 PCAT6-201ENST00000417262 748 ntTSL 2 BASIC16.26■□□□□ 0.19
CCNYL3P0C7X3 METTL21AP1-201ENST00000438852 635 ntBASIC16.26■□□□□ 0.19
CCNYL3P0C7X3 SLC26A4-AS1-202ENST00000449741 586 ntTSL 4 BASIC16.26■□□□□ 0.19
CCNYL3P0C7X3 SNRK-204ENST00000454177 2961 ntAPPRIS P1 TSL 2 BASIC16.26■□□□□ 0.19
CCNYL3P0C7X3 OR7E47P-204ENST00000575924 449 ntBASIC16.26■□□□□ 0.19
CCNYL3P0C7X3 AC024592.3-202ENST00000586349 506 ntTSL 2 BASIC16.26■□□□□ 0.19
CCNYL3P0C7X3 AL355385.1-201ENST00000606123 409 ntBASIC16.26■□□□□ 0.19
CCNYL3P0C7X3 AKIRIN1-202ENST00000432648 2741 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
CCNYL3P0C7X3 AL135999.2-201ENST00000622438 1686 ntBASIC16.26■□□□□ 0.19
CCNYL3P0C7X3 ARHGEF5-202ENST00000471847 1862 ntAPPRIS ALT2 TSL 1 (best) BASIC16.26■□□□□ 0.19
CCNYL3P0C7X3 SVOPL-204ENST00000436657 1420 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
CCNYL3P0C7X3 LMNB2-201ENST00000325327 4671 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
CCNYL3P0C7X3 LRPPRC-203ENST00000409946 1848 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
CCNYL3P0C7X3 RALGDS-205ENST00000393160 3801 ntAPPRIS ALT2 TSL 1 (best) BASIC16.26■□□□□ 0.19
CCNYL3P0C7X3 AGBL5-202ENST00000360131 3177 ntAPPRIS P3 TSL 1 (best) BASIC16.26■□□□□ 0.19
CCNYL3P0C7X3 CSTB-204ENST00000640406 2354 ntTSL 2 BASIC16.26■□□□□ 0.19
CCNYL3P0C7X3 LINC00905-202ENST00000588117 1768 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
CCNYL3P0C7X3 TMEM177-201ENST00000272521 1394 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
CCNYL3P0C7X3 LRFN3-201ENST00000246529 2513 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
CCNYL3P0C7X3 FAM57B-202ENST00000380495 2313 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
CCNYL3P0C7X3 WWTR1-201ENST00000360632 2103 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
CCNYL3P0C7X3 STK39-201ENST00000355999 3820 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
CCNYL3P0C7X3 RHD-207ENST00000454452 1303 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
CCNYL3P0C7X3 ELOA3-201ENST00000330682 1877 ntAPPRIS P1 BASIC16.25■□□□□ 0.19
CCNYL3P0C7X3 KIF5C-201ENST00000435030 6931 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
CCNYL3P0C7X3 GCSH-209ENST00000639689 2412 ntTSL 5 BASIC16.25■□□□□ 0.19
CCNYL3P0C7X3 BAGE2-202ENST00000474011 1482 ntTSL 2 BASIC16.25■□□□□ 0.19
CCNYL3P0C7X3 C22orf39-201ENST00000333059 1221 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
CCNYL3P0C7X3 LINC01503-203ENST00000436710 901 ntTSL 3 BASIC16.25■□□□□ 0.19
CCNYL3P0C7X3 HIST4H4-204ENST00000539745 577 ntAPPRIS P1 BASIC16.25■□□□□ 0.19
CCNYL3P0C7X3 MRPL34-205ENST00000600434 793 ntAPPRIS P2 TSL 3 BASIC16.25■□□□□ 0.19
CCNYL3P0C7X3 CICP6-201ENST00000457191 2729 ntBASIC16.25■□□□□ 0.19
CCNYL3P0C7X3 NMD3-202ENST00000460469 3061 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
CCNYL3P0C7X3 HYAL3-202ENST00000359051 1635 ntTSL 5 BASIC16.25■□□□□ 0.19
CCNYL3P0C7X3 EGR2-203ENST00000439032 2844 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
CCNYL3P0C7X3 DMKN-201ENST00000339686 1927 ntAPPRIS P3 TSL 1 (best) BASIC16.25■□□□□ 0.19
CCNYL3P0C7X3 TFAP2B-202ENST00000393655 5773 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
CCNYL3P0C7X3 STOX1-204ENST00000399169 3281 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
CCNYL3P0C7X3 NDRG4-202ENST00000356752 1375 ntTSL 2 BASIC16.25■□□□□ 0.19
CCNYL3P0C7X3 CLN5-208ENST00000636183 6664 ntAPPRIS P2 TSL 1 (best) BASIC16.25■□□□□ 0.19
CCNYL3P0C7X3 KCNC1-202ENST00000379472 7965 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
CCNYL3P0C7X3 AP000347.2-202ENST00000421064 3041 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
CCNYL3P0C7X3 DNM2-201ENST00000355667 3541 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
CCNYL3P0C7X3 MIOX-202ENST00000395732 1658 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
CCNYL3P0C7X3 CD24-201ENST00000606017 2180 ntAPPRIS P3 TSL 1 (best) BASIC16.24■□□□□ 0.19
CCNYL3P0C7X3 ZNF454-201ENST00000320129 2332 ntAPPRIS P1 TSL 2 BASIC16.24■□□□□ 0.19
CCNYL3P0C7X3 ZGLP1-202ENST00000403903 2303 ntAPPRIS P2 TSL 1 (best) BASIC16.24■□□□□ 0.19
Retrieved 100 of 98,524 protein–RNA pairs in 31.5 ms