Protein–RNA interactions for Protein: P09341

CXCL1, Growth-regulated alpha protein, humanhuman

Predictions only

Length 107 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CXCL1P09341 AL451069.1-201ENST00000455414 634 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
CXCL1P09341 RBCK1-213ENST00000475269 1200 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
CXCL1P09341 SFXN1-203ENST00000502393 637 ntTSL 2 BASIC13.07□□□□□ -0.32
CXCL1P09341 MRPL36-202ENST00000505059 610 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
CXCL1P09341 AC117500.4-201ENST00000542797 617 ntTSL 3 BASIC13.07□□□□□ -0.32
CXCL1P09341 ASF1B-205ENST00000592798 769 ntTSL 2 BASIC13.07□□□□□ -0.32
CXCL1P09341 TRAPPC5-203ENST00000595985 411 ntTSL 3 BASIC13.07□□□□□ -0.32
CXCL1P09341 JRK-210ENST00000614134 8932 ntAPPRIS P4 TSL 1 (best) BASIC13.07□□□□□ -0.32
CXCL1P09341 FAM197Y4-202ENST00000622692 608 ntBASIC13.07□□□□□ -0.32
CXCL1P09341 TP53INP2-201ENST00000374809 4018 ntAPPRIS P1 TSL 5 BASIC13.07□□□□□ -0.32
CXCL1P09341 TUBGCP2-204ENST00000417178 4029 ntTSL 2 BASIC13.07□□□□□ -0.32
CXCL1P09341 SLC22A1-203ENST00000457470 1452 ntTSL 5 BASIC13.07□□□□□ -0.32
CXCL1P09341 ZFAND6-207ENST00000558494 1472 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
CXCL1P09341 STAC3-201ENST00000332782 1656 ntAPPRIS P1 TSL 2 BASIC13.07□□□□□ -0.32
CXCL1P09341 DTX3-204ENST00000548804 2067 ntAPPRIS P3 TSL 5 BASIC13.07□□□□□ -0.32
CXCL1P09341 CEP104-202ENST00000378230 6424 ntAPPRIS P1 TSL 5 BASIC13.07□□□□□ -0.32
CXCL1P09341 PRAL-201ENST00000624952 3286 ntBASIC13.07□□□□□ -0.32
CXCL1P09341 DYSF-207ENST00000409762 6727 ntAPPRIS ALT2 TSL 1 (best) BASIC13.07□□□□□ -0.32
CXCL1P09341 DYSF-211ENST00000429174 6739 ntAPPRIS ALT2 TSL 1 (best) BASIC13.07□□□□□ -0.32
CXCL1P09341 OVCH1-AS1-204ENST00000641955 5529 ntBASIC13.07□□□□□ -0.32
CXCL1P09341 KCNK4-TEX40-201ENST00000539086 2733 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
CXCL1P09341 CNKSR1-202ENST00000374253 2538 ntAPPRIS ALT2 TSL 1 (best) BASIC13.07□□□□□ -0.32
CXCL1P09341 CPEB1-211ENST00000615198 2112 ntAPPRIS P2 TSL 1 (best) BASIC13.07□□□□□ -0.32
CXCL1P09341 CELF4-223ENST00000603232 1906 ntAPPRIS ALT1 TSL 1 (best) BASIC13.07□□□□□ -0.32
CXCL1P09341 ISYNA1-202ENST00000457269 1703 ntTSL 2 BASIC13.07□□□□□ -0.32
CXCL1P09341 MYOG-201ENST00000241651 1528 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
CXCL1P09341 TRIM46-210ENST00000545012 2979 ntTSL 2 BASIC13.07□□□□□ -0.32
CXCL1P09341 SEMA4F-201ENST00000339773 2177 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
CXCL1P09341 LINC00639-201ENST00000553932 4496 ntTSL 2 BASIC13.07□□□□□ -0.32
CXCL1P09341 NF2-210ENST00000413209 4733 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
CXCL1P09341 AC027601.1-201ENST00000575922 4506 ntTSL 2 BASIC13.07□□□□□ -0.32
CXCL1P09341 GPS2-201ENST00000380728 1379 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
CXCL1P09341 TSC22D3-201ENST00000315660 2213 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
CXCL1P09341 LYPLAL1-201ENST00000366927 1819 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
CXCL1P09341 LTV1-201ENST00000367576 1847 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
CXCL1P09341 SLC30A5-209ENST00000621204 3999 ntTSL 5 BASIC13.06□□□□□ -0.32
CXCL1P09341 TOR2A-202ENST00000373281 2477 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
CXCL1P09341 ZNF557-201ENST00000252840 2268 ntAPPRIS P3 TSL 1 (best) BASIC13.06□□□□□ -0.32
CXCL1P09341 AL079301.1-201ENST00000424580 1633 ntTSL 2 BASIC13.06□□□□□ -0.32
CXCL1P09341 ADARB2-203ENST00000381312 8421 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
CXCL1P09341 AC092338.2-201ENST00000568827 1415 ntBASIC13.06□□□□□ -0.32
CXCL1P09341 PDE4DIP-201ENST00000313431 5676 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
CXCL1P09341 SLFNL1-205ENST00000439569 2117 ntAPPRIS P3 TSL 2 BASIC13.06□□□□□ -0.32
CXCL1P09341 SAFB-205ENST00000588852 2842 ntAPPRIS ALT2 TSL 1 (best) BASIC13.06□□□□□ -0.32
CXCL1P09341 LIPE-AS1-205ENST00000594688 2383 ntTSL 2 BASIC13.06□□□□□ -0.32
CXCL1P09341 PCDHA6-203ENST00000529310 5374 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
CXCL1P09341 MPP1-205ENST00000413259 2195 ntTSL 2 BASIC13.06□□□□□ -0.32
CXCL1P09341 LARP6-201ENST00000299213 4469 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
CXCL1P09341 PHYH-202ENST00000396913 1732 ntTSL 5 BASIC13.06□□□□□ -0.32
CXCL1P09341 PEX11G-201ENST00000221480 1062 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
CXCL1P09341 CHPF-202ENST00000373891 1079 ntTSL 2 BASIC13.06□□□□□ -0.32
CXCL1P09341 AL050404.1-201ENST00000424566 802 ntTSL 2 BASIC13.06□□□□□ -0.32
CXCL1P09341 AC005104.2-201ENST00000427818 678 ntBASIC13.06□□□□□ -0.32
CXCL1P09341 CIRBP-235ENST00000591935 746 ntAPPRIS ALT1 TSL 3 BASIC13.06□□□□□ -0.32
CXCL1P09341 C16orf74-206ENST00000602766 832 ntAPPRIS ALT2 TSL 3 BASIC13.06□□□□□ -0.32
CXCL1P09341 AL359736.2-201ENST00000621992 437 ntBASIC13.06□□□□□ -0.32
CXCL1P09341 SEMA5B-201ENST00000195173 4523 ntAPPRIS ALT2 TSL 5 BASIC13.06□□□□□ -0.32
CXCL1P09341 LPO-210ENST00000582328 2680 ntAPPRIS ALT2 TSL 5 BASIC13.06□□□□□ -0.32
CXCL1P09341 PCDHA3-201ENST00000522353 5260 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
CXCL1P09341 PLTP-202ENST00000372420 1530 ntTSL 2 BASIC13.06□□□□□ -0.32
CXCL1P09341 TMEM82-201ENST00000375782 1520 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
CXCL1P09341 LINC00634-201ENST00000381348 1510 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
CXCL1P09341 C17orf100-201ENST00000542475 1756 ntAPPRIS P1 BASIC13.06□□□□□ -0.32
CXCL1P09341 NXF1-213ENST00000532297 2795 ntAPPRIS P1 TSL 5 BASIC13.06□□□□□ -0.32
CXCL1P09341 NFIC-211ENST00000641145 8399 ntBASIC13.06□□□□□ -0.32
CXCL1P09341 ABHD14B-203ENST00000395008 1818 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
CXCL1P09341 ZBTB32-202ENST00000392197 2068 ntAPPRIS P1 TSL 5 BASIC13.06□□□□□ -0.32
CXCL1P09341 CCDC115-201ENST00000259229 1646 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
CXCL1P09341 ADAM15-202ENST00000355956 2877 ntAPPRIS ALT2 TSL 1 (best) BASIC13.06□□□□□ -0.32
CXCL1P09341 STEAP3-204ENST00000409811 2103 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
CXCL1P09341 AP004609.1-201ENST00000498872 1646 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
CXCL1P09341 BNIP2-212ENST00000607373 1851 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
CXCL1P09341 PSMG3-AS1-201ENST00000437621 5701 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
CXCL1P09341 NAALADL1-204ENST00000358658 2699 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
CXCL1P09341 TRIM17-203ENST00000366697 2652 ntAPPRIS P1 TSL 2 BASIC13.06□□□□□ -0.32
CXCL1P09341 GCK-202ENST00000345378 2421 ntTSL 2 BASIC13.05□□□□□ -0.32
CXCL1P09341 AC139530.2-201ENST00000571730 1922 ntAPPRIS P1 TSL 2 BASIC13.05□□□□□ -0.32
CXCL1P09341 C2orf81-202ENST00000612891 1902 ntAPPRIS ALT2 TSL 5 BASIC13.05□□□□□ -0.32
CXCL1P09341 POTEE-204ENST00000613282 1926 ntTSL 5 BASIC13.05□□□□□ -0.32
CXCL1P09341 POTEI-202ENST00000615053 1926 ntTSL 5 BASIC13.05□□□□□ -0.32
CXCL1P09341 IRGC-201ENST00000244314 1662 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
CXCL1P09341 CEACAM16-202ENST00000587331 1692 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
CXCL1P09341 PSD2-201ENST00000274710 4513 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
CXCL1P09341 FBXW9-203ENST00000587955 1437 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
CXCL1P09341 PHTF1-201ENST00000357783 2747 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
CXCL1P09341 GCK-203ENST00000395796 2539 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
CXCL1P09341 SLC39A13-201ENST00000354884 2289 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
CXCL1P09341 MAU2-201ENST00000262815 4994 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
CXCL1P09341 SPATA21-205ENST00000540400 1773 ntAPPRIS ALT2 TSL 1 (best) BASIC13.05□□□□□ -0.32
CXCL1P09341 TRAF7-201ENST00000326181 3700 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
CXCL1P09341 GLB1L2-201ENST00000339772 3152 ntAPPRIS P1 TSL 5 BASIC13.05□□□□□ -0.32
CXCL1P09341 NCF1B-201ENST00000423083 1516 ntTSL 2 BASIC13.05□□□□□ -0.32
CXCL1P09341 MZF1-201ENST00000215057 2905 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
CXCL1P09341 HNRNPK-204ENST00000376263 2942 ntAPPRIS P4 TSL 1 (best) BASIC13.05□□□□□ -0.32
CXCL1P09341 RAB2A-201ENST00000262646 3848 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
CXCL1P09341 KRT18P65-201ENST00000439811 1286 ntBASIC13.05□□□□□ -0.32
CXCL1P09341 C7orf49-209ENST00000483029 596 ntTSL 2 BASIC13.05□□□□□ -0.32
CXCL1P09341 ZNF346-203ENST00000503425 1191 ntTSL 2 BASIC13.05□□□□□ -0.32
CXCL1P09341 H1FX-AS1-204ENST00000511998 917 ntTSL 5 BASIC13.05□□□□□ -0.32
CXCL1P09341 TMEM9B-AS1-201ENST00000525484 1053 ntTSL 5 BASIC13.05□□□□□ -0.32
Retrieved 100 of 98,524 protein–RNA pairs in 56.7 ms