Protein–RNA interactions for Protein: P06753

TPM3, Tropomyosin alpha-3 chain, humanhuman

Predictions only

Length 285 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3P06753 BX664615.1-201ENST00000443558 458 ntBASIC18.9■□□□□ 0.62
TPM3P06753 ATP6V0C-202ENST00000564973 1081 ntTSL 2 BASIC18.9■□□□□ 0.62
TPM3P06753 AC239803.1-201ENST00000594189 1278 ntTSL 5 BASIC18.9■□□□□ 0.62
TPM3P06753 AC018716.2-201ENST00000528390 2597 ntTSL 2 BASIC18.9■□□□□ 0.62
TPM3P06753 PABPC4-202ENST00000372857 3048 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
TPM3P06753 PTGES2-214ENST00000617202 1344 ntTSL 5 BASIC18.9■□□□□ 0.62
TPM3P06753 ADORA1-203ENST00000367235 2219 ntTSL 2 BASIC18.9■□□□□ 0.62
TPM3P06753 ASIC1-201ENST00000228468 4072 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
TPM3P06753 PRPF40B-201ENST00000261897 3602 ntAPPRIS ALT2 TSL 1 (best) BASIC18.9■□□□□ 0.62
TPM3P06753 PAX6-203ENST00000379109 3182 ntAPPRIS ALT1 TSL 2 BASIC18.9■□□□□ 0.62
TPM3P06753 CCDC74B-202ENST00000392984 1353 ntAPPRIS ALT2 TSL 5 BASIC18.9■□□□□ 0.62
TPM3P06753 SCP2-213ENST00000528311 1896 ntTSL 2 BASIC18.9■□□□□ 0.62
TPM3P06753 PPA2-202ENST00000348706 1414 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
TPM3P06753 CORO6-202ENST00000388767 2397 ntAPPRIS P2 TSL 2 BASIC18.9■□□□□ 0.62
TPM3P06753 LONRF3-203ENST00000422289 2898 ntTSL 2 BASIC18.9■□□□□ 0.62
TPM3P06753 OSGIN1-203ENST00000393306 1940 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
TPM3P06753 CSNK2A1-203ENST00000400217 1451 ntTSL 2 BASIC18.9■□□□□ 0.62
TPM3P06753 HYAL1-203ENST00000395143 1522 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
TPM3P06753 PRAMEF20-201ENST00000316412 1597 ntAPPRIS P1 TSL 5 BASIC18.89■□□□□ 0.62
TPM3P06753 PAFAH1B1-202ENST00000397195 5497 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.62
TPM3P06753 FNDC1-201ENST00000297267 6552 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.62
TPM3P06753 RCN2-203ENST00000394885 6347 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
TPM3P06753 PIGW-204ENST00000614443 2312 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
TPM3P06753 ZMYND12-201ENST00000372565 1775 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
TPM3P06753 IFT140-201ENST00000361339 2987 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
TPM3P06753 ENDOV-212ENST00000520284 2500 ntTSL 2 BASIC18.89■□□□□ 0.61
TPM3P06753 MRPL24-202ENST00000368211 883 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
TPM3P06753 HLA-J-202ENST00000469281 1241 ntBASIC18.89■□□□□ 0.61
TPM3P06753 CDH18-AS1-201ENST00000513573 424 ntTSL 2 BASIC18.89■□□□□ 0.61
TPM3P06753 FCGRT-210ENST00000596975 1054 ntTSL 5 BASIC18.89■□□□□ 0.61
TPM3P06753 AL136379.1-201ENST00000623471 2642 ntBASIC18.89■□□□□ 0.61
TPM3P06753 NTMT1-211ENST00000617943 1346 ntTSL 3 BASIC18.89■□□□□ 0.61
TPM3P06753 VARS2-212ENST00000542001 4064 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
TPM3P06753 KIFC1-211ENST00000428849 2706 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
TPM3P06753 RNF113B-201ENST00000267291 1376 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
TPM3P06753 IRF5-210ENST00000477535 1374 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
TPM3P06753 AC125634.1-201ENST00000438758 1403 ntBASIC18.89■□□□□ 0.61
TPM3P06753 KRT8P10-201ENST00000450021 1447 ntBASIC18.89■□□□□ 0.61
TPM3P06753 CAMK1D-204ENST00000619168 8153 ntAPPRIS P4 TSL 1 (best) BASIC18.89■□□□□ 0.61
TPM3P06753 PLTP-205ENST00000477313 2255 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
TPM3P06753 ROBO3-201ENST00000397801 4569 ntAPPRIS P2 TSL 1 (best) BASIC18.89■□□□□ 0.61
TPM3P06753 ROBO3-220ENST00000538940 4551 ntAPPRIS ALT2 TSL 5 BASIC18.89■□□□□ 0.61
TPM3P06753 LARP4-210ENST00000522085 1577 ntTSL 2 BASIC18.89■□□□□ 0.61
TPM3P06753 ALDOA-201ENST00000338110 2384 ntAPPRIS P2 TSL 1 (best) BASIC18.89■□□□□ 0.61
TPM3P06753 NEDD4-202ENST00000435532 5869 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
TPM3P06753 CBSL-201ENST00000398168 2514 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
TPM3P06753 MXI1-202ENST00000332674 3470 ntAPPRIS P4 TSL 1 (best) BASIC18.88■□□□□ 0.61
TPM3P06753 PPEF2-207ENST00000621010 1797 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
TPM3P06753 ETV3L-201ENST00000454449 1976 ntAPPRIS P1 TSL 2 BASIC18.88■□□□□ 0.61
TPM3P06753 ABCB9-216ENST00000542678 6051 ntAPPRIS P2 TSL 1 (best) BASIC18.88■□□□□ 0.61
TPM3P06753 AHCY-201ENST00000217426 2143 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
TPM3P06753 KTN1-AS1-202ENST00000412224 2185 ntTSL 2 BASIC18.88■□□□□ 0.61
TPM3P06753 CPEB2-209ENST00000538197 6878 ntAPPRIS P4 TSL 5 BASIC18.88■□□□□ 0.61
TPM3P06753 CMTM3-202ENST00000424011 2330 ntAPPRIS P1 TSL 2 BASIC18.88■□□□□ 0.61
TPM3P06753 APOPT1-201ENST00000409074 2523 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
TPM3P06753 ANXA11-203ENST00000422982 2534 ntAPPRIS P3 TSL 1 (best) BASIC18.88■□□□□ 0.61
TPM3P06753 AL139300.1-201ENST00000472726 2505 ntAPPRIS P1 TSL 2 BASIC18.88■□□□□ 0.61
TPM3P06753 POMZP3-201ENST00000275569 1259 ntTSL 2 BASIC18.88■□□□□ 0.61
TPM3P06753 ROMO1-204ENST00000374078 498 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
TPM3P06753 CXorf40A-202ENST00000393985 1148 ntAPPRIS P3 TSL 1 (best) BASIC18.88■□□□□ 0.61
TPM3P06753 HOMER2P1-201ENST00000455653 964 ntBASIC18.88■□□□□ 0.61
TPM3P06753 YBX1P2-201ENST00000489612 999 ntBASIC18.88■□□□□ 0.61
TPM3P06753 AC004080.5-201ENST00000498652 368 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
TPM3P06753 AC116353.4-201ENST00000507279 576 ntTSL 4 BASIC18.88■□□□□ 0.61
TPM3P06753 STK19B-204ENST00000512515 211 ntBASIC18.88■□□□□ 0.61
TPM3P06753 AP003396.3-201ENST00000530918 778 ntTSL 5 BASIC18.88■□□□□ 0.61
TPM3P06753 GOLGA2P7-203ENST00000557881 896 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
TPM3P06753 AC005944.1-201ENST00000592758 564 ntTSL 3 BASIC18.88■□□□□ 0.61
TPM3P06753 AC100793.2-201ENST00000593139 542 ntTSL 5 BASIC18.88■□□□□ 0.61
TPM3P06753 TMEM191A-211ENST00000637163 1067 ntBASIC18.88■□□□□ 0.61
TPM3P06753 GHDC-201ENST00000301671 2650 ntAPPRIS P1 TSL 2 BASIC18.88■□□□□ 0.61
TPM3P06753 AKR1A1-214ENST00000621846 1360 ntAPPRIS P1 TSL 5 BASIC18.88■□□□□ 0.61
TPM3P06753 FAM131B-206ENST00000443739 4382 ntAPPRIS ALT1 TSL 1 (best) BASIC18.88■□□□□ 0.61
TPM3P06753 ST8SIA5-202ENST00000536490 1499 ntTSL 2 BASIC18.88■□□□□ 0.61
TPM3P06753 ZFAND6-207ENST00000558494 1472 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
TPM3P06753 AC009336.1-201ENST00000608941 1553 ntBASIC18.88■□□□□ 0.61
TPM3P06753 FAM198B-203ENST00000585682 4900 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
TPM3P06753 CALHM3-201ENST00000369783 1652 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
TPM3P06753 PIGT-257ENST00000640210 1715 ntTSL 5 BASIC18.88■□□□□ 0.61
TPM3P06753 XK-201ENST00000378616 5206 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
TPM3P06753 INTS11-203ENST00000419704 1798 ntTSL 2 BASIC18.88■□□□□ 0.61
TPM3P06753 MKNK2-201ENST00000250896 3774 ntAPPRIS P4 TSL 5 BASIC18.88■□□□□ 0.61
TPM3P06753 CD19-201ENST00000324662 1932 ntAPPRIS P3 TSL 1 (best) BASIC18.88■□□□□ 0.61
TPM3P06753 MPP1-202ENST00000369534 2042 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
TPM3P06753 PI16-201ENST00000373674 2190 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
TPM3P06753 PITPNM2-202ENST00000320201 6736 ntAPPRIS P3 TSL 5 BASIC18.88■□□□□ 0.61
TPM3P06753 EYA2-208ENST00000497062 2384 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
TPM3P06753 AP001372.2-201ENST00000526036 2493 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
TPM3P06753 C14orf79-205ENST00000549240 2503 ntAPPRIS ALT2 TSL 2 BASIC18.88■□□□□ 0.61
TPM3P06753 PTPRO-202ENST00000348962 5061 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
TPM3P06753 RFWD2-204ENST00000367669 3033 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
TPM3P06753 COL11A2-201ENST00000341947 6425 ntAPPRIS ALT2 TSL 5 BASIC18.87■□□□□ 0.61
TPM3P06753 GUCD1-204ENST00000407471 3482 ntAPPRIS P3 TSL 5 BASIC18.87■□□□□ 0.61
TPM3P06753 NID1-201ENST00000264187 5864 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
TPM3P06753 DNAJB9-201ENST00000249356 2715 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
TPM3P06753 TAF1B-201ENST00000263663 2387 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
TPM3P06753 NPNT-201ENST00000305572 3003 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
TPM3P06753 MAP2K5-202ENST00000340972 1491 ntTSL 2 BASIC18.87■□□□□ 0.61
TPM3P06753 ANK1-206ENST00000348036 622 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
TPM3P06753 CFAP100-201ENST00000352312 2086 ntAPPRIS P2 TSL 2 BASIC18.87■□□□□ 0.61
Retrieved 100 of 98,524 protein–RNA pairs in 29.5 ms