Protein–RNA interactions for Protein: P05423

POLR3D, DNA-directed RNA polymerase III subunit RPC4, humanhuman

Predicted RBP Predictions only

Length 398 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
POLR3DP05423 SFN-201ENST00000339276 1320 ntAPPRIS P1 BASIC20.04■□□□□ 0.8
POLR3DP05423 ALDH3A2-225ENST00000630662 1558 ntTSL 5 BASIC20.04■□□□□ 0.8
POLR3DP05423 ZFP64-205ENST00000371518 1841 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
POLR3DP05423 C17orf62-203ENST00000434650 2050 ntTSL 2 BASIC20.04■□□□□ 0.8
POLR3DP05423 HYAL3-207ENST00000621157 1696 ntAPPRIS P1 TSL 5 BASIC20.04■□□□□ 0.8
POLR3DP05423 KCNK9-203ENST00000520439 1441 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
POLR3DP05423 KRT8P49-201ENST00000604166 1432 ntBASIC20.04■□□□□ 0.8
POLR3DP05423 PROC-201ENST00000234071 1773 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
POLR3DP05423 ITGA8-201ENST00000378076 6755 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
POLR3DP05423 RPS27A-201ENST00000272317 1071 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
POLR3DP05423 ROPN1L-201ENST00000274134 1066 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
POLR3DP05423 CRYBA2-201ENST00000295728 893 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
POLR3DP05423 TMEM179B-201ENST00000333449 1023 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
POLR3DP05423 HIST1H3D-201ENST00000356476 411 ntAPPRIS P1 BASIC20.04■□□□□ 0.8
POLR3DP05423 AC004461.1-201ENST00000412461 403 ntBASIC20.04■□□□□ 0.8
POLR3DP05423 AL354836.1-201ENST00000414042 681 ntTSL 2 BASIC20.04■□□□□ 0.8
POLR3DP05423 TIMM8BP1-201ENST00000452384 211 ntBASIC20.04■□□□□ 0.8
POLR3DP05423 AHSA1-202ENST00000535854 1173 ntTSL 2 BASIC20.04■□□□□ 0.8
POLR3DP05423 COX14-202ENST00000548985 677 ntAPPRIS P1 TSL 2 BASIC20.04■□□□□ 0.8
POLR3DP05423 MPDU1-223ENST00000582151 728 ntBASIC20.04■□□□□ 0.8
POLR3DP05423 METTL23-203ENST00000586738 1059 ntTSL 5 BASIC20.04■□□□□ 0.8
POLR3DP05423 METTL23-205ENST00000588302 925 ntTSL 5 BASIC20.04■□□□□ 0.8
POLR3DP05423 GPR42-202ENST00000597214 1182 ntAPPRIS P1 BASIC20.04■□□□□ 0.8
POLR3DP05423 AC010615.2-202ENST00000597444 832 ntTSL 3 BASIC20.04■□□□□ 0.8
POLR3DP05423 AC004835.2-201ENST00000603762 682 ntBASIC20.04■□□□□ 0.8
POLR3DP05423 FSTL3-207ENST00000605925 748 ntTSL 4 BASIC20.04■□□□□ 0.8
POLR3DP05423 MRFAP1-205ENST00000617365 2112 ntTSL 5 BASIC20.04■□□□□ 0.8
POLR3DP05423 ASPH-211ENST00000518068 2744 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
POLR3DP05423 MIB2-232ENST00000520777 3321 ntAPPRIS ALT2 TSL 1 (best) BASIC20.04■□□□□ 0.8
POLR3DP05423 ZDHHC9-202ENST00000371064 2473 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
POLR3DP05423 B4GALT4-216ENST00000483209 2494 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
POLR3DP05423 RAB15-203ENST00000533601 3515 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
POLR3DP05423 RABGGTA-201ENST00000216840 2088 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
POLR3DP05423 STOX1-201ENST00000298596 3377 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
POLR3DP05423 ARHGEF4-206ENST00000428230 2172 ntTSL 5 BASIC20.04■□□□□ 0.8
POLR3DP05423 GAL3ST4-201ENST00000360039 2537 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
POLR3DP05423 KLHDC7B-201ENST00000395676 2991 ntAPPRIS P1 BASIC20.04■□□□□ 0.8
POLR3DP05423 OPCML-202ENST00000374778 1302 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
POLR3DP05423 MBOAT1-201ENST00000324607 1794 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
POLR3DP05423 UNC5C-202ENST00000504962 1789 ntTSL 2 BASIC20.03■□□□□ 0.8
POLR3DP05423 KDSR-202ENST00000406396 5447 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
POLR3DP05423 TSPAN4-205ENST00000397406 1426 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
POLR3DP05423 NCOA5-201ENST00000290231 3220 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
POLR3DP05423 RPAIN-203ENST00000381209 1535 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
POLR3DP05423 ZNF580-202ENST00000543039 1707 ntAPPRIS P1 BASIC20.03■□□□□ 0.8
POLR3DP05423 PIGT-257ENST00000640210 1715 ntTSL 5 BASIC20.03■□□□□ 0.8
POLR3DP05423 GOSR2-202ENST00000393456 788 ntTSL 3 BASIC20.03■□□□□ 0.8
POLR3DP05423 IZUMO4-201ENST00000395296 869 ntTSL 2 BASIC20.03■□□□□ 0.8
POLR3DP05423 YWHAZ-204ENST00000395953 994 ntAPPRIS P1 TSL 5 BASIC20.03■□□□□ 0.8
POLR3DP05423 ANKRD54-202ENST00000406423 954 ntTSL 3 BASIC20.03■□□□□ 0.8
POLR3DP05423 AL355306.1-201ENST00000415580 579 ntBASIC20.03■□□□□ 0.8
POLR3DP05423 GATB-205ENST00000508611 605 ntTSL 2 BASIC20.03■□□□□ 0.8
POLR3DP05423 PTHLH-207ENST00000539239 890 ntAPPRIS ALT1 TSL 5 BASIC20.03■□□□□ 0.8
POLR3DP05423 AC087641.1-201ENST00000557561 1021 ntBASIC20.03■□□□□ 0.8
POLR3DP05423 AC022145.2-201ENST00000598203 171 ntBASIC20.03■□□□□ 0.8
POLR3DP05423 AC027612.4-201ENST00000605371 583 ntBASIC20.03■□□□□ 0.8
POLR3DP05423 TBX18-206ENST00000606784 1230 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
POLR3DP05423 AC026120.1-201ENST00000611536 926 ntBASIC20.03■□□□□ 0.8
POLR3DP05423 HNRNPH1-250ENST00000630639 123 ntTSL 5 BASIC20.03■□□□□ 0.8
POLR3DP05423 SLC27A2-201ENST00000267842 2394 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
POLR3DP05423 APBA2-207ENST00000558402 4031 ntAPPRIS P1 TSL 5 BASIC20.03■□□□□ 0.8
POLR3DP05423 KLF3-201ENST00000261438 5122 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
POLR3DP05423 TPSAB1-202ENST00000461509 1357 ntAPPRIS ALT2 TSL 1 (best) BASIC20.03■□□□□ 0.8
POLR3DP05423 AC092053.1-201ENST00000605787 1936 ntBASIC20.03■□□□□ 0.8
POLR3DP05423 HNRNPLL-202ENST00000358367 2779 ntTSL 5 BASIC20.03■□□□□ 0.8
POLR3DP05423 NR2C1-219ENST00000622476 1561 ntTSL 5 BASIC20.03■□□□□ 0.8
POLR3DP05423 CRYM-AS1-201ENST00000338573 1661 ntTSL 2 BASIC20.03■□□□□ 0.8
POLR3DP05423 AC084018.2-201ENST00000613093 2607 ntBASIC20.03■□□□□ 0.8
POLR3DP05423 AATK-201ENST00000326724 5257 ntAPPRIS P3 TSL 5 BASIC20.03■□□□□ 0.8
POLR3DP05423 LINC01569-202ENST00000573042 2093 ntTSL 2 BASIC20.03■□□□□ 0.8
POLR3DP05423 NTNG1-203ENST00000370066 1443 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
POLR3DP05423 BLOC1S5-202ENST00000397457 2684 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
POLR3DP05423 DPEP1-203ENST00000421184 1647 ntAPPRIS P1 TSL 5 BASIC20.02■□□□□ 0.8
POLR3DP05423 AC131009.4-201ENST00000624048 1740 ntBASIC20.02■□□□□ 0.8
POLR3DP05423 BCRP2-201ENST00000398241 1842 ntTSL 2 BASIC20.02■□□□□ 0.8
POLR3DP05423 WRAP53-203ENST00000431639 1818 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
POLR3DP05423 WRAP53-204ENST00000457584 1828 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
POLR3DP05423 F12-201ENST00000253496 2049 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
POLR3DP05423 C14orf28-201ENST00000325192 2915 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
POLR3DP05423 LDLRAP1-201ENST00000374338 2940 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
POLR3DP05423 PMS1-206ENST00000418224 3018 ntTSL 5 BASIC20.02■□□□□ 0.8
POLR3DP05423 AL109613.1-202ENST00000427243 639 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
POLR3DP05423 IRF3-204ENST00000442265 315 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
POLR3DP05423 AL390729.1-201ENST00000456651 587 ntTSL 2 BASIC20.02■□□□□ 0.8
POLR3DP05423 FAM86C2P-203ENST00000528684 1004 ntBASIC20.02■□□□□ 0.8
POLR3DP05423 NR2C2AP-204ENST00000538165 891 ntTSL 2 BASIC20.02■□□□□ 0.8
POLR3DP05423 AC027796.2-201ENST00000575326 344 ntBASIC20.02■□□□□ 0.8
POLR3DP05423 AL009183.1-201ENST00000603760 355 ntBASIC20.02■□□□□ 0.8
POLR3DP05423 STXBP2-222ENST00000612033 1188 ntTSL 5 BASIC20.02■□□□□ 0.8
POLR3DP05423 RAB9A-203ENST00000618931 737 ntAPPRIS P1 TSL 2 BASIC20.02■□□□□ 0.8
POLR3DP05423 AP001350.2-201ENST00000625104 1094 ntBASIC20.02■□□□□ 0.8
POLR3DP05423 SBNO2-202ENST00000438103 4537 ntAPPRIS ALT2 TSL 2 BASIC20.02■□□□□ 0.8
POLR3DP05423 ETV7-207ENST00000620358 1599 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
POLR3DP05423 SELENBP1-201ENST00000368868 1752 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
POLR3DP05423 NFE2-202ENST00000435572 1762 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
POLR3DP05423 TLE3-205ENST00000539550 2464 ntTSL 2 BASIC20.02■□□□□ 0.8
POLR3DP05423 PROSER1-201ENST00000352251 5168 ntAPPRIS P2 TSL 1 (best) BASIC20.02■□□□□ 0.8
POLR3DP05423 MMP17-206ENST00000535291 2301 ntAPPRIS ALT2 TSL 1 (best) BASIC20.02■□□□□ 0.79
POLR3DP05423 TJP1-212ENST00000614355 6977 ntAPPRIS ALT2 TSL 5 BASIC20.02■□□□□ 0.79
POLR3DP05423 JKAMP-215ENST00000616435 2338 ntTSL 5 BASIC20.02■□□□□ 0.79
Retrieved 100 of 98,524 protein–RNA pairs in 30.7 ms