Protein–RNA interactions for Protein: P04436

T-cell receptor alpha chain V region HPB-MLT (Fragment), humanhuman

Predictions only

Length 131 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
P04436 ATP6V1C2-204ENST00000635370 1578 ntTSL 5 BASIC15.32■□□□□ 0.04
P04436 DIDO1-207ENST00000395343 8477 ntAPPRIS ALT2 TSL 1 (best) BASIC15.32■□□□□ 0.04
P04436 DHX33-202ENST00000433302 2225 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
P04436 FAM53C-202ENST00000434981 1686 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
P04436 TJP3-201ENST00000539908 2897 ntAPPRIS ALT2 TSL 2 BASIC15.32■□□□□ 0.04
P04436 EHD2-202ENST00000538399 1766 ntTSL 2 BASIC15.32■□□□□ 0.04
P04436 BANP-223ENST00000538234 2372 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
P04436 IL27RA-201ENST00000263379 2962 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
P04436 SLC9A2-201ENST00000233969 5410 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
P04436 SLCO6A1-201ENST00000379807 2437 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
P04436 HIST1H3D-201ENST00000356476 411 ntAPPRIS P1 BASIC15.32■□□□□ 0.04
P04436 SLC2A8-201ENST00000373352 914 ntTSL 2 BASIC15.32■□□□□ 0.04
P04436 HSD17B8-203ENST00000374662 990 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
P04436 CLIC1-208ENST00000375784 1254 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
P04436 PRORY-201ENST00000382764 878 ntAPPRIS P1 TSL 5 BASIC15.32■□□□□ 0.04
P04436 TFAMP1-201ENST00000412727 736 ntBASIC15.32■□□□□ 0.04
P04436 MCF2L-AS1-201ENST00000446789 712 ntTSL 3 BASIC15.32■□□□□ 0.04
P04436 STT3A-AS1-201ENST00000530526 429 ntTSL 3 BASIC15.32■□□□□ 0.04
P04436 FAM227B-204ENST00000558594 1139 ntAPPRIS ALT2 TSL 5 BASIC15.32■□□□□ 0.04
P04436 PMF1-BGLAP-204ENST00000567140 655 ntTSL 3 BASIC15.32■□□□□ 0.04
P04436 AC130456.4-201ENST00000568635 665 ntTSL 2 BASIC15.32■□□□□ 0.04
P04436 MIR4492-201ENST00000581627 80 ntBASIC15.32■□□□□ 0.04
P04436 GPR42-202ENST00000597214 1182 ntAPPRIS P1 BASIC15.32■□□□□ 0.04
P04436 AC105339.1-204ENST00000636249 355 ntBASIC15.32■□□□□ 0.04
P04436 CHRNA7-207ENST00000635884 1975 ntTSL 5 BASIC15.32■□□□□ 0.04
P04436 ERO1A-201ENST00000395686 5285 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
P04436 TSC2-207ENST00000439673 5287 ntAPPRIS ALT2 TSL 2 BASIC15.32■□□□□ 0.04
P04436 LINC02138-201ENST00000378340 1326 ntTSL 2 BASIC15.32■□□□□ 0.04
P04436 AKAP8P1-201ENST00000434743 1349 ntBASIC15.32■□□□□ 0.04
P04436 C8orf33-201ENST00000331434 2677 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
P04436 SLC9A3P2-201ENST00000447821 2021 ntBASIC15.32■□□□□ 0.04
P04436 KIAA1217-206ENST00000376462 6123 ntAPPRIS ALT2 TSL 1 (best) BASIC15.32■□□□□ 0.04
P04436 GDA-201ENST00000238018 2074 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
P04436 SEMA5B-211ENST00000616742 4933 ntAPPRIS P3 TSL 5 BASIC15.32■□□□□ 0.04
P04436 ATP6V1E1-201ENST00000253413 1402 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
P04436 OCIAD1-213ENST00000508293 1423 ntAPPRIS P1 TSL 5 BASIC15.32■□□□□ 0.04
P04436 ATG2A-203ENST00000421419 1481 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
P04436 CDK16-223ENST00000622098 2968 ntTSL 2 BASIC15.32■□□□□ 0.04
P04436 MCM9-201ENST00000316068 2442 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
P04436 WWTR1-204ENST00000467467 1603 ntAPPRIS P1 TSL 5 BASIC15.32■□□□□ 0.04
P04436 CRYM-AS1-201ENST00000338573 1661 ntTSL 2 BASIC15.32■□□□□ 0.04
P04436 ENOSF1-202ENST00000340116 1658 ntTSL 5 BASIC15.32■□□□□ 0.04
P04436 EIF4A3-201ENST00000269349 1734 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
P04436 ZBTB22-207ENST00000418724 2645 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
P04436 LSP1-203ENST00000405957 1785 ntAPPRIS ALT2 TSL 5 BASIC15.31■□□□□ 0.04
P04436 HOXC5-201ENST00000312492 1805 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
P04436 ZNF853-201ENST00000457543 3857 ntAPPRIS P1 TSL 3 BASIC15.31■□□□□ 0.04
P04436 PFKL-201ENST00000349048 2912 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
P04436 ABTB1-201ENST00000232744 1965 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
P04436 DNM1-202ENST00000372923 3244 ntAPPRIS P3 TSL 1 (best) BASIC15.31■□□□□ 0.04
P04436 MYC-202ENST00000377970 2351 ntAPPRIS ALT2 TSL 1 (best) BASIC15.31■□□□□ 0.04
P04436 ROPN1L-201ENST00000274134 1066 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
P04436 ANAPC11-201ENST00000344877 918 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
P04436 STOM-202ENST00000347359 870 ntTSL 2 BASIC15.31■□□□□ 0.04
P04436 MRPL9-202ENST00000368830 1296 ntAPPRIS P3 TSL 1 (best) BASIC15.31■□□□□ 0.04
P04436 DANCR-201ENST00000411630 904 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
P04436 AC092474.2-201ENST00000424288 719 ntBASIC15.31■□□□□ 0.04
P04436 WDR53-204ENST00000433160 887 ntTSL 5 BASIC15.31■□□□□ 0.04
P04436 IQCF3-204ENST00000446775 1241 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
P04436 ANAPC11-213ENST00000577747 672 ntAPPRIS P1 TSL 5 BASIC15.31■□□□□ 0.04
P04436 AC010503.2-201ENST00000599292 296 ntTSL 3 BASIC15.31■□□□□ 0.04
P04436 AC021097.1-201ENST00000607902 574 ntBASIC15.31■□□□□ 0.04
P04436 AC247036.6-201ENST00000632950 410 ntAPPRIS P1 BASIC15.31■□□□□ 0.04
P04436 GNE-201ENST00000377902 2565 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
P04436 TIMM50-202ENST00000544017 2572 ntAPPRIS P2 TSL 1 (best) BASIC15.31■□□□□ 0.04
P04436 TMEFF2-201ENST00000272771 2604 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
P04436 NSL1-203ENST00000366978 1344 ntTSL 2 BASIC15.31■□□□□ 0.04
P04436 TES-201ENST00000358204 2782 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
P04436 TRAF4-201ENST00000262395 2923 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
P04436 CAMKV-204ENST00000466940 1475 ntTSL 2 BASIC15.31■□□□□ 0.04
P04436 SH2B1-206ENST00000545570 1488 ntTSL 2 BASIC15.31■□□□□ 0.04
P04436 NFIX-209ENST00000587760 1487 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
P04436 GLG1-202ENST00000422840 4748 ntAPPRIS ALT2 TSL 1 (best) BASIC15.31■□□□□ 0.04
P04436 THTPA-203ENST00000554789 1595 ntTSL 2 BASIC15.31■□□□□ 0.04
P04436 ALDH16A1-201ENST00000293350 3153 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
P04436 MAGI1-213ENST00000483466 4791 ntAPPRIS P3 TSL 1 (best) BASIC15.31■□□□□ 0.04
P04436 GIGYF1-201ENST00000275732 6530 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
P04436 AD000671.3-202ENST00000591091 1712 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
P04436 TXNL4A-201ENST00000269601 3504 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
P04436 PROC-201ENST00000234071 1773 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
P04436 PDCD5-203ENST00000419343 1799 ntTSL 2 BASIC15.31■□□□□ 0.04
P04436 ADARB1-204ENST00000389863 3563 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
P04436 ABHD3-209ENST00000580981 1836 ntTSL 5 BASIC15.31■□□□□ 0.04
P04436 GOLGA7-204ENST00000520817 1984 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
P04436 BPIFB4-201ENST00000375483 2159 ntAPPRIS P1 TSL 5 BASIC15.31■□□□□ 0.04
P04436 NLGN2-201ENST00000302926 4642 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
P04436 GPR149-201ENST00000389740 2323 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
P04436 LINC00921-202ENST00000573951 2468 ntTSL 2 BASIC15.31■□□□□ 0.04
P04436 BRD3-201ENST00000303407 5652 ntAPPRIS P2 TSL 1 (best) BASIC15.3■□□□□ 0.04
P04436 TP73-AS1-203ENST00000423764 2875 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
P04436 KDM1A-202ENST00000400181 3059 ntAPPRIS ALT2 TSL 1 (best) BASIC15.3■□□□□ 0.04
P04436 PELP1-208ENST00000572293 5272 ntAPPRIS P2 TSL 1 (best) BASIC15.3■□□□□ 0.04
P04436 MON2-213ENST00000552738 5543 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
P04436 WDR81-202ENST00000409644 6733 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
P04436 HDAC10-201ENST00000216271 2687 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
P04436 ZNF419-201ENST00000221735 2309 ntAPPRIS ALT2 TSL 1 (best) BASIC15.3■□□□□ 0.04
P04436 THAP8-201ENST00000292894 1825 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
P04436 AFF2-204ENST00000370458 1488 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
P04436 C9orf116-202ENST00000371789 1278 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
P04436 DOLK-201ENST00000372586 2090 ntAPPRIS P1 BASIC15.3■□□□□ 0.04
Retrieved 100 of 98,524 protein–RNA pairs in 24.7 ms