Protein–RNA interactions for Protein: P03999

OPN1SW, Short-wave-sensitive opsin 1, humanhuman

Predictions only

Length 348 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
OPN1SWP03999 LRFN2-201ENST00000338305 3270 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
OPN1SWP03999 DFFA-201ENST00000377036 1403 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
OPN1SWP03999 SIGLEC16-201ENST00000599858 1437 ntBASIC15.75■□□□□ 0.11
OPN1SWP03999 LINC00895-201ENST00000629028 1637 ntBASIC15.75■□□□□ 0.11
OPN1SWP03999 CD1E-213ENST00000444681 1820 ntAPPRIS ALT2 TSL 1 (best) BASIC15.75■□□□□ 0.11
OPN1SWP03999 MUL1-201ENST00000264198 2438 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
OPN1SWP03999 NKPD1-201ENST00000317951 4233 ntAPPRIS P1 TSL 2 BASIC15.75■□□□□ 0.11
OPN1SWP03999 UCKL1-203ENST00000369908 1954 ntAPPRIS P1 TSL 2 BASIC15.75■□□□□ 0.11
OPN1SWP03999 C2orf54-203ENST00000402775 1958 ntAPPRIS ALT2 TSL 2 BASIC15.75■□□□□ 0.11
OPN1SWP03999 CD9-203ENST00000382518 1556 ntAPPRIS P1 TSL 5 BASIC15.75■□□□□ 0.11
OPN1SWP03999 AC243591.1-201ENST00000452967 1364 ntBASIC15.75■□□□□ 0.11
OPN1SWP03999 SLC22A1-202ENST00000366963 1948 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
OPN1SWP03999 NRG1-202ENST00000356819 5931 ntAPPRIS ALT2 TSL 1 (best) BASIC15.74■□□□□ 0.11
OPN1SWP03999 SNX19-207ENST00000528555 1506 ntTSL 2 BASIC15.74■□□□□ 0.11
OPN1SWP03999 SNX31-201ENST00000311812 2457 ntAPPRIS P1 TSL 2 BASIC15.74■□□□□ 0.11
OPN1SWP03999 ZNF213-206ENST00000574902 3208 ntAPPRIS P1 TSL 5 BASIC15.74■□□□□ 0.11
OPN1SWP03999 COQ8B-202ENST00000324464 2443 ntAPPRIS P3 TSL 1 (best) BASIC15.74■□□□□ 0.11
OPN1SWP03999 KRT35-202ENST00000393989 1670 ntAPPRIS P1 TSL 5 BASIC15.74■□□□□ 0.11
OPN1SWP03999 GUCA1A-203ENST00000394237 2233 ntAPPRIS P1 TSL 2 BASIC15.74■□□□□ 0.11
OPN1SWP03999 KLK3-201ENST00000326003 1463 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
OPN1SWP03999 PEG3-206ENST00000598410 5304 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
OPN1SWP03999 CLCF1-201ENST00000312438 1844 ntAPPRIS P3 TSL 1 (best) BASIC15.74■□□□□ 0.11
OPN1SWP03999 KHDC1-201ENST00000257765 1134 ntAPPRIS P3 TSL 1 (best) BASIC15.74■□□□□ 0.11
OPN1SWP03999 STRA8-201ENST00000275764 993 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
OPN1SWP03999 ZNF81-201ENST00000334937 610 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
OPN1SWP03999 VMO1-202ENST00000354194 651 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
OPN1SWP03999 TLE1-202ENST00000376484 666 ntTSL 3 BASIC15.74■□□□□ 0.11
OPN1SWP03999 KRTAP5-6-201ENST00000382160 561 ntAPPRIS P1 BASIC15.74■□□□□ 0.11
OPN1SWP03999 BX890604.1-205ENST00000425492 856 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
OPN1SWP03999 ABCD1P5-201ENST00000445663 754 ntBASIC15.74■□□□□ 0.11
OPN1SWP03999 KNCN-203ENST00000481882 1037 ntAPPRIS ALT2 TSL 5 BASIC15.74■□□□□ 0.11
OPN1SWP03999 NDUFA6-202ENST00000498737 1256 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
OPN1SWP03999 ANKRD29-202ENST00000585908 846 ntTSL 2 BASIC15.74■□□□□ 0.11
OPN1SWP03999 AC092329.2-201ENST00000598402 547 ntBASIC15.74■□□□□ 0.11
OPN1SWP03999 NDUFA6-203ENST00000602404 1080 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
OPN1SWP03999 KHDC1-207ENST00000610435 1101 ntAPPRIS P3 TSL 5 BASIC15.74■□□□□ 0.11
OPN1SWP03999 BCL10-202ENST00000620248 774 ntTSL 5 BASIC15.74■□□□□ 0.11
OPN1SWP03999 SCAMP4-213ENST00000621748 1172 ntAPPRIS P1 TSL 5 BASIC15.74■□□□□ 0.11
OPN1SWP03999 AL732314.6-201ENST00000627721 484 ntTSL 4 BASIC15.74■□□□□ 0.11
OPN1SWP03999 JADE2-201ENST00000282605 2748 ntAPPRIS P1 TSL 2 BASIC15.74■□□□□ 0.11
OPN1SWP03999 JPT1-209ENST00000482348 1614 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
OPN1SWP03999 AC079776.2-201ENST00000641154 1609 ntBASIC15.74■□□□□ 0.11
OPN1SWP03999 SHQ1-201ENST00000325599 2879 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
OPN1SWP03999 CLEC18A-202ENST00000393701 1955 ntAPPRIS P2 TSL 1 (best) BASIC15.74■□□□□ 0.11
OPN1SWP03999 CLEC18C-203ENST00000541793 1955 ntAPPRIS P2 TSL 1 (best) BASIC15.74■□□□□ 0.11
OPN1SWP03999 FOXO3-201ENST00000343882 7308 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
OPN1SWP03999 CARS-203ENST00000397111 2685 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
OPN1SWP03999 FEM1C-201ENST00000274457 5816 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
OPN1SWP03999 CSNK1D-204ENST00000398519 1580 ntTSL 5 BASIC15.74■□□□□ 0.11
OPN1SWP03999 ANKRD24-206ENST00000600132 4026 ntAPPRIS P2 TSL 5 BASIC15.74■□□□□ 0.11
OPN1SWP03999 RAD51D-201ENST00000335858 1353 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
OPN1SWP03999 EPB41L3-203ENST00000400111 4259 ntTSL 5 BASIC15.74■□□□□ 0.11
OPN1SWP03999 ZNF644-201ENST00000337393 5763 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
OPN1SWP03999 ITGA7-202ENST00000347027 4084 ntAPPRIS ALT2 TSL 5 BASIC15.73■□□□□ 0.11
OPN1SWP03999 TIGD2-202ENST00000603357 3217 ntAPPRIS P1 TSL 4 BASIC15.73■□□□□ 0.11
OPN1SWP03999 TVP23C-201ENST00000225576 1527 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
OPN1SWP03999 CLDN15-208ENST00000611078 1509 ntTSL 5 BASIC15.73■□□□□ 0.11
OPN1SWP03999 CTSB-201ENST00000345125 2028 ntAPPRIS P1 TSL 5 BASIC15.73■□□□□ 0.11
OPN1SWP03999 COL18A1-203ENST00000359759 6586 ntAPPRIS ALT2 TSL 5 BASIC15.73■□□□□ 0.11
OPN1SWP03999 MYB-242ENST00000618728 3545 ntTSL 5 BASIC15.73■□□□□ 0.11
OPN1SWP03999 FBXO4-201ENST00000281623 1682 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
OPN1SWP03999 NEO1-207ENST00000560262 4315 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
OPN1SWP03999 IDH3G-201ENST00000217901 1485 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
OPN1SWP03999 NUTM2F-201ENST00000253262 2561 ntAPPRIS P2 TSL 1 (best) BASIC15.73■□□□□ 0.11
OPN1SWP03999 BX088651.4-201ENST00000435586 2579 ntTSL 2 BASIC15.73■□□□□ 0.11
OPN1SWP03999 MAPK7-201ENST00000299612 2715 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
OPN1SWP03999 ASGR1-202ENST00000380920 944 ntTSL 3 BASIC15.73■□□□□ 0.11
OPN1SWP03999 TMEM213-202ENST00000413208 480 ntAPPRIS ALT2 TSL 3 BASIC15.73■□□□□ 0.11
OPN1SWP03999 POM121L3P-201ENST00000419331 1163 ntBASIC15.73■□□□□ 0.11
OPN1SWP03999 RBSN-204ENST00000449050 903 ntTSL 2 BASIC15.73■□□□□ 0.11
OPN1SWP03999 LAMTOR4-205ENST00000468582 621 ntTSL 2 BASIC15.73■□□□□ 0.11
OPN1SWP03999 BX005266.1-201ENST00000473402 457 ntBASIC15.73■□□□□ 0.11
OPN1SWP03999 ATP6V0C-203ENST00000565223 668 ntTSL 3 BASIC15.73■□□□□ 0.11
OPN1SWP03999 AC027682.5-201ENST00000567122 530 ntTSL 3 BASIC15.73■□□□□ 0.11
OPN1SWP03999 COX5A-204ENST00000567270 579 ntTSL 3 BASIC15.73■□□□□ 0.11
OPN1SWP03999 ATP6V0C-204ENST00000568562 477 ntTSL 3 BASIC15.73■□□□□ 0.11
OPN1SWP03999 HOXB8-203ENST00000576562 743 ntAPPRIS ALT1 TSL 2 BASIC15.73■□□□□ 0.11
OPN1SWP03999 AC092119.3-201ENST00000612618 583 ntBASIC15.73■□□□□ 0.11
OPN1SWP03999 AC243773.1-201ENST00000614759 544 ntTSL 5 BASIC15.73■□□□□ 0.11
OPN1SWP03999 CCNC-219ENST00000627680 896 ntTSL 5 BASIC15.73■□□□□ 0.11
OPN1SWP03999 CCDC120-203ENST00000536628 2381 ntAPPRIS ALT2 TSL 2 BASIC15.73■□□□□ 0.11
OPN1SWP03999 KRT76-201ENST00000332411 2529 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
OPN1SWP03999 AC006538.1-201ENST00000567905 1585 ntBASIC15.73■□□□□ 0.11
OPN1SWP03999 SERPINB6-207ENST00000612421 1570 ntTSL 2 BASIC15.73■□□□□ 0.11
OPN1SWP03999 NR4A2-203ENST00000409108 1735 ntTSL 5 BASIC15.73■□□□□ 0.11
OPN1SWP03999 WDR81-206ENST00000446363 2968 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
OPN1SWP03999 HLA-A-204ENST00000396634 1868 ntAPPRIS P1 BASIC15.73■□□□□ 0.11
OPN1SWP03999 SLC30A4-201ENST00000261867 7157 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
OPN1SWP03999 MAPKAP1-202ENST00000350766 3256 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
OPN1SWP03999 CDK11B-208ENST00000629289 2490 ntTSL 5 BASIC15.73■□□□□ 0.11
OPN1SWP03999 ELMO1-209ENST00000448602 2621 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
OPN1SWP03999 INTS11-247ENST00000540437 2629 ntTSL 2 BASIC15.73■□□□□ 0.11
OPN1SWP03999 USP13-201ENST00000263966 8323 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
OPN1SWP03999 ZNF84-208ENST00000539354 3237 ntAPPRIS P2 TSL 1 (best) BASIC15.73■□□□□ 0.11
OPN1SWP03999 CHID1-201ENST00000323578 3374 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
OPN1SWP03999 EYA2-201ENST00000317304 1540 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
OPN1SWP03999 CLCNKA-203ENST00000439316 1997 ntTSL 2 BASIC15.73■□□□□ 0.11
OPN1SWP03999 SERINC2-202ENST00000373710 2146 ntTSL 2 BASIC15.73■□□□□ 0.11
OPN1SWP03999 CD1D-201ENST00000368171 2253 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
OPN1SWP03999 PNMA6E-202ENST00000633844 2596 ntTSL 3 BASIC15.73■□□□□ 0.11
Retrieved 100 of 98,524 protein–RNA pairs in 51.3 ms