Protein–RNA interactions for Protein: P03897

MT-ND3, NADH-ubiquinone oxidoreductase chain 3, humanhuman

Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MT-ND3P03897 ALPPL2-201ENST00000295453 2493 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
MT-ND3P03897 SLC43A3-203ENST00000395124 2617 ntAPPRIS P3 TSL 1 (best) BASIC17.17■□□□□ 0.34
MT-ND3P03897 HTR1A-201ENST00000323865 1778 ntAPPRIS P1 BASIC17.17■□□□□ 0.34
MT-ND3P03897 DENND1A-202ENST00000373620 3612 ntAPPRIS ALT2 TSL 1 (best) BASIC17.17■□□□□ 0.34
MT-ND3P03897 CCDC90B-203ENST00000525503 1919 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
MT-ND3P03897 DNAJC10-210ENST00000616986 5783 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
MT-ND3P03897 FAM131B-206ENST00000443739 4382 ntAPPRIS ALT1 TSL 1 (best) BASIC17.17■□□□□ 0.34
MT-ND3P03897 UAP1L1-202ENST00000409858 3365 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
MT-ND3P03897 PDE4DIP-201ENST00000313431 5676 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
MT-ND3P03897 AIFM3-202ENST00000399167 2387 ntAPPRIS P3 TSL 2 BASIC17.17■□□□□ 0.34
MT-ND3P03897 AIFM3-207ENST00000440238 2368 ntAPPRIS P3 TSL 1 (best) BASIC17.17■□□□□ 0.34
MT-ND3P03897 TTLL11-201ENST00000321582 3250 ntAPPRIS P1 TSL 5 BASIC17.17■□□□□ 0.34
MT-ND3P03897 SPRED2-206ENST00000443619 1800 ntAPPRIS P1 TSL 2 BASIC17.17■□□□□ 0.34
MT-ND3P03897 PI4KAP1-201ENST00000610959 2425 ntTSL 2 BASIC17.17■□□□□ 0.34
MT-ND3P03897 C2orf81-206ENST00000640868 2407 ntAPPRIS ALT2 BASIC17.17■□□□□ 0.34
MT-ND3P03897 ELN-221ENST00000445912 2583 ntAPPRIS ALT2 TSL 2 BASIC17.17■□□□□ 0.34
MT-ND3P03897 MSI2-201ENST00000284073 6364 ntAPPRIS P4 TSL 1 (best) BASIC17.17■□□□□ 0.34
MT-ND3P03897 TMEM89-201ENST00000330862 662 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
MT-ND3P03897 SDC4-201ENST00000372733 2613 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
MT-ND3P03897 MRPL23-201ENST00000381514 919 ntTSL 3 BASIC17.17■□□□□ 0.34
MT-ND3P03897 MYRIP-202ENST00000396217 4877 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
MT-ND3P03897 KMT5B-205ENST00000402789 1599 ntTSL 5 BASIC17.17■□□□□ 0.34
MT-ND3P03897 ATP6V0E2-201ENST00000421974 2605 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
MT-ND3P03897 CABP4-202ENST00000438189 1426 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
MT-ND3P03897 HYAL3-205ENST00000450982 1402 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
MT-ND3P03897 AC009078.2-202ENST00000463353 338 ntBASIC17.17■□□□□ 0.34
MT-ND3P03897 CCNG1-208ENST00000510664 994 ntTSL 5 BASIC17.17■□□□□ 0.34
MT-ND3P03897 STK19B-204ENST00000512515 211 ntBASIC17.17■□□□□ 0.34
MT-ND3P03897 AK2-210ENST00000548033 936 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
MT-ND3P03897 AC003688.1-201ENST00000577138 489 ntAPPRIS P1 TSL 3 BASIC17.17■□□□□ 0.34
MT-ND3P03897 AP005901.3-202ENST00000581653 237 ntBASIC17.17■□□□□ 0.34
MT-ND3P03897 FLT3LG-206ENST00000597551 951 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
MT-ND3P03897 AL591684.3-201ENST00000605187 298 ntBASIC17.17■□□□□ 0.34
MT-ND3P03897 CEACAM3-208ENST00000630848 1110 ntAPPRIS ALT2 TSL 5 BASIC17.17■□□□□ 0.34
MT-ND3P03897 PCNX2-201ENST00000258229 7518 ntAPPRIS P2 TSL 5 BASIC17.17■□□□□ 0.34
MT-ND3P03897 ZNF672-201ENST00000306562 2989 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
MT-ND3P03897 ATP6V0E2-AS1-201ENST00000461019 2973 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
MT-ND3P03897 FEZF1-AS1-202ENST00000428449 2653 ntTSL 2 BASIC17.17■□□□□ 0.34
MT-ND3P03897 GDF5-201ENST00000374369 2383 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
MT-ND3P03897 LGMN-216ENST00000557434 1797 ntTSL 5 BASIC17.17■□□□□ 0.34
MT-ND3P03897 KDM8-202ENST00000441782 1612 ntTSL 2 BASIC17.17■□□□□ 0.34
MT-ND3P03897 PURB-201ENST00000395699 9069 ntAPPRIS P1 BASIC17.17■□□□□ 0.34
MT-ND3P03897 PLPPR2-201ENST00000251473 2727 ntAPPRIS P3 TSL 1 (best) BASIC17.17■□□□□ 0.34
MT-ND3P03897 FLJ31104-201ENST00000500093 2289 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
MT-ND3P03897 STEAP3-204ENST00000409811 2103 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
MT-ND3P03897 MCF2L2-201ENST00000328913 4980 ntAPPRIS P2 TSL 5 BASIC17.17■□□□□ 0.34
MT-ND3P03897 DMPK-204ENST00000447742 2754 ntAPPRIS ALT2 TSL 1 (best) BASIC17.17■□□□□ 0.34
MT-ND3P03897 CORO2B-201ENST00000261861 3569 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
MT-ND3P03897 CORO2B-204ENST00000566799 3566 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
MT-ND3P03897 HSF5-201ENST00000323777 4094 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
MT-ND3P03897 SARAF-201ENST00000256255 2154 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
MT-ND3P03897 SLA2-202ENST00000360672 2171 ntTSL 5 BASIC17.16■□□□□ 0.34
MT-ND3P03897 PIGT-257ENST00000640210 1715 ntTSL 5 BASIC17.16■□□□□ 0.34
MT-ND3P03897 AC009336.1-201ENST00000608941 1553 ntBASIC17.16■□□□□ 0.34
MT-ND3P03897 ITGA7-202ENST00000347027 4084 ntAPPRIS ALT2 TSL 5 BASIC17.16■□□□□ 0.34
MT-ND3P03897 KLC4-202ENST00000347162 2404 ntAPPRIS ALT2 TSL 1 (best) BASIC17.16■□□□□ 0.34
MT-ND3P03897 PICALM-204ENST00000526033 3613 ntAPPRIS ALT1 TSL 1 (best) BASIC17.16■□□□□ 0.34
MT-ND3P03897 NFE2-202ENST00000435572 1762 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
MT-ND3P03897 CARD14-202ENST00000570421 2607 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
MT-ND3P03897 AL645728.1-201ENST00000366221 2101 ntBASIC17.16■□□□□ 0.34
MT-ND3P03897 PRSS38-201ENST00000366757 1267 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
MT-ND3P03897 PSMB8-202ENST00000374882 1124 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
MT-ND3P03897 METTL21A-205ENST00000426075 1051 ntAPPRIS P1 TSL 2 BASIC17.16■□□□□ 0.34
MT-ND3P03897 LINC00882-201ENST00000473636 710 ntTSL 3 BASIC17.16■□□□□ 0.34
MT-ND3P03897 AC099805.1-202ENST00000519927 1057 ntTSL 5 BASIC17.16■□□□□ 0.34
MT-ND3P03897 RNASEK-203ENST00000549393 783 ntTSL 3 BASIC17.16■□□□□ 0.34
MT-ND3P03897 AL157871.1-202ENST00000556458 478 ntTSL 5 BASIC17.16■□□□□ 0.34
MT-ND3P03897 AC013356.2-201ENST00000559730 729 ntTSL 3 BASIC17.16■□□□□ 0.34
MT-ND3P03897 COX5A-204ENST00000567270 579 ntTSL 3 BASIC17.16■□□□□ 0.34
MT-ND3P03897 AC036176.1-201ENST00000589905 785 ntTSL 2 BASIC17.16■□□□□ 0.34
MT-ND3P03897 AC004130.1-202ENST00000603156 666 ntTSL 2 BASIC17.16■□□□□ 0.34
MT-ND3P03897 IGHV3OR16-7-201ENST00000604106 360 ntBASIC17.16■□□□□ 0.34
MT-ND3P03897 CDK11B-208ENST00000629289 2490 ntTSL 5 BASIC17.16■□□□□ 0.34
MT-ND3P03897 CDK11B-209ENST00000629312 2496 ntTSL 5 BASIC17.16■□□□□ 0.34
MT-ND3P03897 ADCY1-204ENST00000621543 1647 ntTSL 5 BASIC17.16■□□□□ 0.34
MT-ND3P03897 C9orf172-201ENST00000436881 4387 ntAPPRIS P1 BASIC17.16■□□□□ 0.34
MT-ND3P03897 STARD7-201ENST00000337288 3368 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
MT-ND3P03897 PCCB-207ENST00000466072 1844 ntAPPRIS ALT2 TSL 3 BASIC17.16■□□□□ 0.34
MT-ND3P03897 AC136759.1-201ENST00000534201 2163 ntTSL 2 BASIC17.16■□□□□ 0.34
MT-ND3P03897 TRIM39-205ENST00000396551 3249 ntAPPRIS ALT2 TSL 5 BASIC17.16■□□□□ 0.34
MT-ND3P03897 MAP3K11-201ENST00000309100 3566 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
MT-ND3P03897 CORO6-202ENST00000388767 2397 ntAPPRIS P2 TSL 2 BASIC17.16■□□□□ 0.34
MT-ND3P03897 MPP1-202ENST00000369534 2042 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
MT-ND3P03897 TAB1-202ENST00000331454 1660 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
MT-ND3P03897 AC022188.1-201ENST00000620960 1664 ntBASIC17.16■□□□□ 0.34
MT-ND3P03897 TUBB8P12-201ENST00000308911 1335 ntBASIC17.16■□□□□ 0.34
MT-ND3P03897 ULBP2-201ENST00000367351 1349 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
MT-ND3P03897 TUBB7P-202ENST00000428444 1305 ntBASIC17.16■□□□□ 0.34
MT-ND3P03897 TUBB8P7-204ENST00000567960 1332 ntBASIC17.16■□□□□ 0.34
MT-ND3P03897 FAM83G-201ENST00000345041 2929 ntAPPRIS P1 TSL 5 BASIC17.16■□□□□ 0.34
MT-ND3P03897 P2RY6-204ENST00000393592 1515 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
MT-ND3P03897 CYP4F22-202ENST00000601005 2445 ntAPPRIS P1 TSL 5 BASIC17.16■□□□□ 0.34
MT-ND3P03897 CACNA1A-221ENST00000636012 7500 ntAPPRIS ALT2 TSL 5 BASIC17.16■□□□□ 0.34
MT-ND3P03897 NCOA1-205ENST00000406961 7289 ntAPPRIS P4 TSL 5 BASIC17.15■□□□□ 0.34
MT-ND3P03897 FGF4-201ENST00000168712 3233 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
MT-ND3P03897 RUFY2-203ENST00000388768 4502 ntTSL 2 BASIC17.15■□□□□ 0.34
MT-ND3P03897 SIK3-201ENST00000375300 6213 ntAPPRIS P3 TSL 2 BASIC17.15■□□□□ 0.34
MT-ND3P03897 GLS2-217ENST00000623608 2518 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
MT-ND3P03897 SGO1-203ENST00000412997 2587 ntAPPRIS P4 TSL 1 (best) BASIC17.15■□□□□ 0.34
MT-ND3P03897 FGD4-212ENST00000534526 2977 ntTSL 5 BASIC17.15■□□□□ 0.34
Retrieved 100 of 98,524 protein–RNA pairs in 44.5 ms