Protein–RNA interactions for Protein: P01127

PDGFB, Platelet-derived growth factor subunit B, humanhuman

Predicted RBP Predictions only

Length 241 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFBP01127 RNF34-201ENST00000361234 2066 ntAPPRIS ALT1 TSL 1 (best) BASIC16.68■□□□□ 0.26
PDGFBP01127 MAPK8IP3-202ENST00000356010 4456 ntTSL 5 BASIC16.68■□□□□ 0.26
PDGFBP01127 RHOT1-202ENST00000354266 2919 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
PDGFBP01127 GDPD3-202ENST00000406256 1397 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
PDGFBP01127 LINC00671-201ENST00000301683 1958 ntTSL 2 BASIC16.68■□□□□ 0.26
PDGFBP01127 CFL1-203ENST00000525451 1878 ntAPPRIS P1 TSL 2 BASIC16.68■□□□□ 0.26
PDGFBP01127 NCR1-201ENST00000291890 1155 ntAPPRIS P3 TSL 5 BASIC16.68■□□□□ 0.26
PDGFBP01127 NCR1-202ENST00000338835 973 ntAPPRIS ALT2 TSL 1 (best) BASIC16.68■□□□□ 0.26
PDGFBP01127 NCR1-203ENST00000350790 739 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
PDGFBP01127 ROPN1-202ENST00000405845 1007 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
PDGFBP01127 Z82214.2-201ENST00000420269 531 ntTSL 4 BASIC16.68■□□□□ 0.26
PDGFBP01127 KIF9-205ENST00000432493 633 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
PDGFBP01127 KDM4A-AS1-204ENST00000439057 686 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
PDGFBP01127 IFITM3-202ENST00000526811 543 ntAPPRIS ALT1 TSL 5 BASIC16.68■□□□□ 0.26
PDGFBP01127 AGER-214ENST00000538695 487 ntTSL 2 BASIC16.68■□□□□ 0.26
PDGFBP01127 RHBDL2-203ENST00000540558 697 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
PDGFBP01127 BX927359.1-201ENST00000556073 543 ntTSL 2 BASIC16.68■□□□□ 0.26
PDGFBP01127 RORA-AS1-205ENST00000559824 761 ntTSL 3 BASIC16.68■□□□□ 0.26
PDGFBP01127 QPRT-203ENST00000562473 579 ntTSL 3 BASIC16.68■□□□□ 0.26
PDGFBP01127 AC007611.1-201ENST00000568150 826 ntTSL 2 BASIC16.68■□□□□ 0.26
PDGFBP01127 PAM16-204ENST00000571941 674 ntTSL 3 BASIC16.68■□□□□ 0.26
PDGFBP01127 LINC01887-202ENST00000584734 860 ntTSL 3 BASIC16.68■□□□□ 0.26
PDGFBP01127 AGER-215ENST00000620802 737 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
PDGFBP01127 HPCAL1-208ENST00000622018 1535 ntAPPRIS P1 TSL 5 BASIC16.68■□□□□ 0.26
PDGFBP01127 NFS1-202ENST00000374085 2645 ntTSL 2 BASIC16.68■□□□□ 0.26
PDGFBP01127 ZNF211-211ENST00000541801 2629 ntAPPRIS ALT2 TSL 3 BASIC16.68■□□□□ 0.26
PDGFBP01127 AC008105.1-201ENST00000587534 2003 ntTSL 2 BASIC16.68■□□□□ 0.26
PDGFBP01127 SHC3-202ENST00000375835 9768 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
PDGFBP01127 SYTL3-201ENST00000297239 2292 ntAPPRIS ALT1 TSL 1 (best) BASIC16.68■□□□□ 0.26
PDGFBP01127 MARK2-202ENST00000361128 3004 ntAPPRIS ALT2 TSL 1 (best) BASIC16.68■□□□□ 0.26
PDGFBP01127 TCEA2-203ENST00000361317 1427 ntTSL 2 BASIC16.68■□□□□ 0.26
PDGFBP01127 LMF1-AS1-202ENST00000569574 1408 ntTSL 3 BASIC16.68■□□□□ 0.26
PDGFBP01127 ACOT9-201ENST00000336430 1675 ntAPPRIS P3 TSL 1 (best) BASIC16.68■□□□□ 0.26
PDGFBP01127 ZNF76-202ENST00000339411 2447 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
PDGFBP01127 PLA2G2F-201ENST00000375102 2723 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
PDGFBP01127 PCCA-202ENST00000376285 2494 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
PDGFBP01127 NOC2LP1-202ENST00000452600 2235 ntBASIC16.68■□□□□ 0.26
PDGFBP01127 RAB17-201ENST00000264601 1966 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
PDGFBP01127 ZNF302-214ENST00000613363 2893 ntAPPRIS ALT2 TSL 4 BASIC16.67■□□□□ 0.26
PDGFBP01127 KANSL1-202ENST00000432791 5343 ntAPPRIS P3 TSL 1 (best) BASIC16.67■□□□□ 0.26
PDGFBP01127 PML-221ENST00000569965 2148 ntAPPRIS ALT2 TSL 1 (best) BASIC16.67■□□□□ 0.26
PDGFBP01127 GCGR-202ENST00000570996 1872 ntAPPRIS ALT2 TSL 2 BASIC16.67■□□□□ 0.26
PDGFBP01127 ARRDC2-201ENST00000222250 2503 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
PDGFBP01127 KAZN-203ENST00000376030 6030 ntAPPRIS P1 TSL 5 BASIC16.67■□□□□ 0.26
PDGFBP01127 LRRC1-202ENST00000370888 3180 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
PDGFBP01127 GXYLT1-202ENST00000398675 7497 ntAPPRIS P4 TSL 1 (best) BASIC16.67■□□□□ 0.26
PDGFBP01127 PCCB-218ENST00000490504 1613 ntTSL 3 BASIC16.67■□□□□ 0.26
PDGFBP01127 LRCH3-207ENST00000441090 2034 ntTSL 2 BASIC16.67■□□□□ 0.26
PDGFBP01127 TRIM63-201ENST00000374272 1770 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
PDGFBP01127 FIP1L1-203ENST00000358575 2180 ntAPPRIS P4 TSL 2 BASIC16.67■□□□□ 0.26
PDGFBP01127 PCDHA2-203ENST00000526136 5254 ntAPPRIS P2 TSL 1 (best) BASIC16.67■□□□□ 0.26
PDGFBP01127 ILVBL-209ENST00000534378 2067 ntTSL 5 BASIC16.67■□□□□ 0.26
PDGFBP01127 CTRB1-201ENST00000361017 858 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
PDGFBP01127 S100A16-201ENST00000368703 946 ntAPPRIS P1 TSL 3 BASIC16.67■□□□□ 0.26
PDGFBP01127 PABPN1L-201ENST00000411789 873 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
PDGFBP01127 ESPNP-202ENST00000414828 571 ntTSL 3 BASIC16.67■□□□□ 0.26
PDGFBP01127 RAD18-204ENST00000418463 563 ntTSL 4 BASIC16.67■□□□□ 0.26
PDGFBP01127 RAD18-205ENST00000421052 582 ntTSL 3 BASIC16.67■□□□□ 0.26
PDGFBP01127 SAPCD1-209ENST00000425424 820 ntAPPRIS ALT2 TSL 5 BASIC16.67■□□□□ 0.26
PDGFBP01127 AL669831.5-201ENST00000434264 844 ntTSL 5 BASIC16.67■□□□□ 0.26
PDGFBP01127 KCNQ1-AS1-201ENST00000440887 1084 ntTSL 5 BASIC16.67■□□□□ 0.26
PDGFBP01127 AC099552.3-201ENST00000454149 367 ntTSL 3 BASIC16.67■□□□□ 0.26
PDGFBP01127 ZNF767P-206ENST00000513792 565 ntBASIC16.67■□□□□ 0.26
PDGFBP01127 IL32-211ENST00000525643 1272 ntAPPRIS P4 TSL 1 (best) BASIC16.67■□□□□ 0.26
PDGFBP01127 IL32-213ENST00000528163 950 ntAPPRIS P4 TSL 2 BASIC16.67■□□□□ 0.26
PDGFBP01127 AL133523.1-201ENST00000554537 331 ntTSL 3 BASIC16.67■□□□□ 0.26
PDGFBP01127 AC012322.1-201ENST00000561657 861 ntTSL 3 BASIC16.67■□□□□ 0.26
PDGFBP01127 AC233724.13-201ENST00000598383 410 ntBASIC16.67■□□□□ 0.26
PDGFBP01127 HIST1H2BO-201ENST00000616182 381 ntAPPRIS P1 BASIC16.67■□□□□ 0.26
PDGFBP01127 AC006453.2-202ENST00000635968 827 ntTSL 5 BASIC16.67■□□□□ 0.26
PDGFBP01127 COX20-203ENST00000411948 2631 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
PDGFBP01127 ULK3-220ENST00000569437 2611 ntAPPRIS ALT1 TSL 1 (best) BASIC16.67■□□□□ 0.26
PDGFBP01127 RELL2-201ENST00000297164 2520 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
PDGFBP01127 CD1D-201ENST00000368171 2253 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
PDGFBP01127 PRMT5-204ENST00000397441 2418 ntTSL 2 BASIC16.67■□□□□ 0.26
PDGFBP01127 ZNF446-201ENST00000335841 1889 ntTSL 5 BASIC16.67■□□□□ 0.26
PDGFBP01127 MPL-202ENST00000413998 1887 ntAPPRIS ALT2 TSL 1 (best) BASIC16.67■□□□□ 0.26
PDGFBP01127 MEIKIN-203ENST00000442687 1315 ntAPPRIS P2 TSL 1 (best) BASIC16.67■□□□□ 0.26
PDGFBP01127 HYOU1-212ENST00000532519 2162 ntTSL 5 BASIC16.67■□□□□ 0.26
PDGFBP01127 ENOSF1-209ENST00000580982 1397 ntTSL 5 BASIC16.66■□□□□ 0.26
PDGFBP01127 OLA1-202ENST00000344357 1656 ntTSL 2 BASIC16.66■□□□□ 0.26
PDGFBP01127 TNFAIP1-202ENST00000544907 1656 ntTSL 2 BASIC16.66■□□□□ 0.26
PDGFBP01127 GABRB2-202ENST00000353437 1963 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
PDGFBP01127 LTBP1-203ENST00000404816 6333 ntAPPRIS P4 TSL 5 BASIC16.66■□□□□ 0.26
PDGFBP01127 MAPK8IP1-201ENST00000241014 3050 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
PDGFBP01127 ACTL9-201ENST00000324436 1426 ntAPPRIS P1 BASIC16.66■□□□□ 0.26
PDGFBP01127 VAPA-201ENST00000340541 1227 ntTSL 5 BASIC16.66■□□□□ 0.26
PDGFBP01127 SSBP3-203ENST00000371319 1578 ntAPPRIS ALT1 TSL 2 BASIC16.66■□□□□ 0.26
PDGFBP01127 APOC3-202ENST00000375345 604 ntTSL 5 BASIC16.66■□□□□ 0.26
PDGFBP01127 TSPAN32-204ENST00000381121 999 ntAPPRIS ALT2 TSL 5 BASIC16.66■□□□□ 0.26
PDGFBP01127 LSP1-202ENST00000381775 2016 ntAPPRIS ALT2 TSL 2 BASIC16.66■□□□□ 0.26
PDGFBP01127 TMEM26-AS1-201ENST00000389640 863 ntTSL 5 BASIC16.66■□□□□ 0.26
PDGFBP01127 SHTN1-203ENST00000392901 2190 ntAPPRIS ALT2 TSL 2 BASIC16.66■□□□□ 0.26
PDGFBP01127 MAFF-202ENST00000407965 2325 ntAPPRIS P1 TSL 2 BASIC16.66■□□□□ 0.26
PDGFBP01127 THPO-202ENST00000421442 1132 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
PDGFBP01127 MDM2-215ENST00000428863 1037 ntTSL 5 BASIC16.66■□□□□ 0.26
PDGFBP01127 CSF2RBP1-201ENST00000447905 391 ntBASIC16.66■□□□□ 0.26
PDGFBP01127 AL353747.3-201ENST00000454185 579 ntTSL 3 BASIC16.66■□□□□ 0.26
PDGFBP01127 SLC25A47P1-201ENST00000531577 414 ntBASIC16.66■□□□□ 0.26
PDGFBP01127 TCTN1-225ENST00000551590 2309 ntAPPRIS ALT2 TSL 1 (best) BASIC16.66■□□□□ 0.26
Retrieved 100 of 98,524 protein–RNA pairs in 25.5 ms