Protein–RNA interactions for Protein: O95476

CTDNEP1, CTD nuclear envelope phosphatase 1, humanhuman

Predictions only

Length 244 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTDNEP1O95476 ZNF514-201ENST00000295208 3011 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
CTDNEP1O95476 SLC44A1-203ENST00000374724 3088 ntAPPRIS ALT1 TSL 5 BASIC19.4■□□□□ 0.7
CTDNEP1O95476 CDCA5-201ENST00000275517 2587 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
CTDNEP1O95476 ATP6AP2-225ENST00000637482 1648 ntAPPRIS ALT2 TSL 5 BASIC19.4■□□□□ 0.7
CTDNEP1O95476 ENOSF1-202ENST00000340116 1658 ntTSL 5 BASIC19.4■□□□□ 0.7
CTDNEP1O95476 MPIG6B-204ENST00000375809 2396 ntAPPRIS ALT2 TSL 1 (best) BASIC19.4■□□□□ 0.7
CTDNEP1O95476 ZNF672-201ENST00000306562 2989 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
CTDNEP1O95476 DACH1-203ENST00000619232 2986 ntAPPRIS ALT2 TSL 5 BASIC19.4■□□□□ 0.7
CTDNEP1O95476 CADPS2-202ENST00000334010 6045 ntAPPRIS ALT2 TSL 5 BASIC19.4■□□□□ 0.7
CTDNEP1O95476 TFF3-201ENST00000291525 407 ntAPPRIS ALT2 TSL 5 BASIC19.4■□□□□ 0.7
CTDNEP1O95476 SFTPC-201ENST00000318561 997 ntAPPRIS P3 TSL 1 (best) BASIC19.4■□□□□ 0.7
CTDNEP1O95476 SERF1B-202ENST00000380751 703 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
CTDNEP1O95476 AGTRAP-205ENST00000400895 786 ntTSL 2 BASIC19.4■□□□□ 0.7
CTDNEP1O95476 DDT-204ENST00000404092 805 ntTSL 3 BASIC19.4■□□□□ 0.7
CTDNEP1O95476 SLC4A1APP2-201ENST00000424054 1259 ntBASIC19.4■□□□□ 0.7
CTDNEP1O95476 AL133410.2-201ENST00000425499 696 ntTSL 5 BASIC19.4■□□□□ 0.7
CTDNEP1O95476 LINC01237-203ENST00000430555 843 ntTSL 4 BASIC19.4■□□□□ 0.7
CTDNEP1O95476 AL391069.2-202ENST00000447795 622 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
CTDNEP1O95476 ANAPC11-210ENST00000574924 722 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
CTDNEP1O95476 DEF8-228ENST00000610455 816 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
CTDNEP1O95476 SGO1-203ENST00000412997 2587 ntAPPRIS P4 TSL 1 (best) BASIC19.4■□□□□ 0.7
CTDNEP1O95476 FOXP3-206ENST00000557224 1371 ntTSL 2 BASIC19.4■□□□□ 0.7
CTDNEP1O95476 CHST10-201ENST00000264249 2842 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
CTDNEP1O95476 SERINC2-202ENST00000373710 2146 ntTSL 2 BASIC19.4■□□□□ 0.7
CTDNEP1O95476 DZIP1L-204ENST00000469243 2107 ntAPPRIS ALT2 TSL 2 BASIC19.4■□□□□ 0.7
CTDNEP1O95476 FSTL3-206ENST00000592947 2144 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
CTDNEP1O95476 RER1-202ENST00000378512 1404 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
CTDNEP1O95476 GPX3-209ENST00000614343 1478 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
CTDNEP1O95476 TSHZ3-201ENST00000240587 5176 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
CTDNEP1O95476 TRABD-202ENST00000380909 2272 ntAPPRIS P3 TSL 5 BASIC19.4■□□□□ 0.7
CTDNEP1O95476 TBC1D10C-203ENST00000526387 1520 ntTSL 2 BASIC19.4■□□□□ 0.7
CTDNEP1O95476 MIOS-202ENST00000405785 3095 ntAPPRIS P1 TSL 5 BASIC19.4■□□□□ 0.7
CTDNEP1O95476 SURF4-208ENST00000613129 3148 ntTSL 2 BASIC19.4■□□□□ 0.7
CTDNEP1O95476 NR2C2-201ENST00000323373 2406 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
CTDNEP1O95476 AL355987.4-201ENST00000415992 4244 ntTSL 2 BASIC19.4■□□□□ 0.7
CTDNEP1O95476 GFAP-233ENST00000639277 1783 ntTSL 5 BASIC19.39■□□□□ 0.7
CTDNEP1O95476 ADAM15-228ENST00000531455 2678 ntAPPRIS ALT2 TSL 2 BASIC19.39■□□□□ 0.7
CTDNEP1O95476 COL18A1-204ENST00000400337 5436 ntTSL 1 (best) BASIC19.39■□□□□ 0.7
CTDNEP1O95476 PCDHA1-201ENST00000378133 2726 ntBASIC19.39■□□□□ 0.7
CTDNEP1O95476 DUSP18-206ENST00000407308 1978 ntAPPRIS P1 TSL 5 BASIC19.39■□□□□ 0.7
CTDNEP1O95476 BCAT2-202ENST00000402551 2041 ntTSL 2 BASIC19.39■□□□□ 0.69
CTDNEP1O95476 ZNF281-203ENST00000367353 3080 ntAPPRIS P3 TSL 1 (best) BASIC19.39■□□□□ 0.69
CTDNEP1O95476 PUS1-208ENST00000542167 2151 ntTSL 5 BASIC19.39■□□□□ 0.69
CTDNEP1O95476 LAD1-201ENST00000367313 2336 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
CTDNEP1O95476 RCAN3-210ENST00000618490 2386 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
CTDNEP1O95476 SMAP1-201ENST00000316999 2403 ntAPPRIS P3 TSL 1 (best) BASIC19.39■□□□□ 0.69
CTDNEP1O95476 BRCC3-202ENST00000340647 1101 ntAPPRIS P2 TSL 2 BASIC19.39■□□□□ 0.69
CTDNEP1O95476 SNHG5-201ENST00000369605 1032 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
CTDNEP1O95476 OTOS-202ENST00000391989 645 ntAPPRIS P1 TSL 3 BASIC19.39■□□□□ 0.69
CTDNEP1O95476 ICAM2-202ENST00000418105 1252 ntAPPRIS P1 TSL 3 BASIC19.39■□□□□ 0.69
CTDNEP1O95476 WDR53-204ENST00000433160 887 ntTSL 5 BASIC19.39■□□□□ 0.69
CTDNEP1O95476 MIR503HG-203ENST00000441492 649 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
CTDNEP1O95476 FCHSD1-204ENST00000519800 802 ntTSL 2 BASIC19.39■□□□□ 0.69
CTDNEP1O95476 PENK-208ENST00000523051 772 ntTSL 5 BASIC19.39■□□□□ 0.69
CTDNEP1O95476 MRPL49-203ENST00000526171 501 ntTSL 2 BASIC19.39■□□□□ 0.69
CTDNEP1O95476 CYB561D1-208ENST00000528785 1271 ntAPPRIS ALT1 TSL 5 BASIC19.39■□□□□ 0.69
CTDNEP1O95476 ADAM10-217ENST00000561288 583 ntTSL 3 BASIC19.39■□□□□ 0.69
CTDNEP1O95476 AC034105.1-201ENST00000563488 319 ntBASIC19.39■□□□□ 0.69
CTDNEP1O95476 SPINT1-AS1-202ENST00000564302 643 ntTSL 2 BASIC19.39■□□□□ 0.69
CTDNEP1O95476 AC092115.3-201ENST00000575838 592 ntTSL 5 BASIC19.39■□□□□ 0.69
CTDNEP1O95476 TCAP-202ENST00000578283 583 ntTSL 5 BASIC19.39■□□□□ 0.69
CTDNEP1O95476 ICAM2-208ENST00000579788 1103 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
CTDNEP1O95476 AC008878.4-201ENST00000602083 293 ntTSL 5 BASIC19.39■□□□□ 0.69
CTDNEP1O95476 AC097376.2-204ENST00000609359 627 ntTSL 2 BASIC19.39■□□□□ 0.69
CTDNEP1O95476 AC010507.1-201ENST00000633895 436 ntBASIC19.39■□□□□ 0.69
CTDNEP1O95476 BBS2-218ENST00000568104 2623 ntTSL 5 BASIC19.39■□□□□ 0.69
CTDNEP1O95476 CLN3-203ENST00000357806 1469 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
CTDNEP1O95476 SH2B1-206ENST00000545570 1488 ntTSL 2 BASIC19.39■□□□□ 0.69
CTDNEP1O95476 DGKZ-201ENST00000318201 3213 ntTSL 2 BASIC19.39■□□□□ 0.69
CTDNEP1O95476 SDR16C5-201ENST00000303749 1840 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
CTDNEP1O95476 WNT10B-203ENST00000407467 1802 ntTSL 2 BASIC19.39■□□□□ 0.69
CTDNEP1O95476 C17orf113-201ENST00000587304 3746 ntAPPRIS P1 TSL 5 BASIC19.39■□□□□ 0.69
CTDNEP1O95476 F3-202ENST00000370207 1879 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
CTDNEP1O95476 NRP1-203ENST00000374821 1988 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
CTDNEP1O95476 SNAI2-201ENST00000020945 2010 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
CTDNEP1O95476 SCP2-204ENST00000407246 2239 ntTSL 2 BASIC19.39■□□□□ 0.69
CTDNEP1O95476 FRMD6-AS1-201ENST00000617151 2229 ntBASIC19.39■□□□□ 0.69
CTDNEP1O95476 AC006019.1-201ENST00000425591 2470 ntTSL 2 BASIC19.39■□□□□ 0.69
CTDNEP1O95476 SHANK3-203ENST00000445220 5175 ntAPPRIS ALT2 TSL 5 BASIC19.38■□□□□ 0.69
CTDNEP1O95476 EFR3A-201ENST00000254624 5438 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
CTDNEP1O95476 ZYG11A-202ENST00000371532 3942 ntTSL 5 BASIC19.38■□□□□ 0.69
CTDNEP1O95476 ROCK2-202ENST00000315872 8292 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
CTDNEP1O95476 PRDM5-201ENST00000264808 5330 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
CTDNEP1O95476 ARPC5-201ENST00000294742 1637 ntAPPRIS ALT1 TSL 1 (best) BASIC19.38■□□□□ 0.69
CTDNEP1O95476 TXNDC2-201ENST00000306084 1873 ntAPPRIS ALT2 TSL 1 (best) BASIC19.38■□□□□ 0.69
CTDNEP1O95476 NR2C1-201ENST00000330677 2014 ntTSL 5 BASIC19.38■□□□□ 0.69
CTDNEP1O95476 C1orf43-201ENST00000350592 1610 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
CTDNEP1O95476 HIST1H3D-201ENST00000356476 411 ntAPPRIS P1 BASIC19.38■□□□□ 0.69
CTDNEP1O95476 TEAD4-202ENST00000359864 1690 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
CTDNEP1O95476 FNDC11-202ENST00000370098 1112 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
CTDNEP1O95476 MRPS15-201ENST00000373116 1006 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
CTDNEP1O95476 ZMYM3-203ENST00000373981 1841 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
CTDNEP1O95476 MPP1-205ENST00000413259 2195 ntTSL 2 BASIC19.38■□□□□ 0.69
CTDNEP1O95476 CDK2AP2P3-201ENST00000422476 372 ntBASIC19.38■□□□□ 0.69
CTDNEP1O95476 RHOQP3-201ENST00000437982 621 ntBASIC19.38■□□□□ 0.69
CTDNEP1O95476 TSPAN32-207ENST00000451520 1236 ntAPPRIS ALT2 TSL 2 BASIC19.38■□□□□ 0.69
CTDNEP1O95476 PPP2R2B-206ENST00000453001 2569 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
CTDNEP1O95476 REPIN1-217ENST00000518514 478 ntTSL 3 BASIC19.38■□□□□ 0.69
CTDNEP1O95476 PCDHA2-203ENST00000526136 5254 ntAPPRIS P2 TSL 1 (best) BASIC19.38■□□□□ 0.69
CTDNEP1O95476 IQCC-202ENST00000537469 2252 ntAPPRIS ALT2 TSL 1 (best) BASIC19.38■□□□□ 0.69
Retrieved 100 of 98,524 protein–RNA pairs in 44.4 ms