Protein–RNA interactions for Protein: O76031

CLPX, ATP-dependent Clp protease ATP-binding subunit clpX-like, mitochondrial, humanhuman

Predictions only

Length 633 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLPXO76031 CHRM4-201ENST00000433765 1511 ntAPPRIS P1 BASIC15.32■□□□□ 0.04
CLPXO76031 MICAL1-201ENST00000358577 3142 ntAPPRIS ALT2 TSL 1 (best) BASIC15.32■□□□□ 0.04
CLPXO76031 SCNN1A-221ENST00000543768 2361 ntAPPRIS ALT2 TSL 2 BASIC15.32■□□□□ 0.04
CLPXO76031 PHLDB1-202ENST00000361417 5753 ntAPPRIS P3 TSL 1 (best) BASIC15.32■□□□□ 0.04
CLPXO76031 NDOR1-202ENST00000371521 2497 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
CLPXO76031 LPAR3-201ENST00000370611 1720 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
CLPXO76031 FMO5-201ENST00000254090 2632 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
CLPXO76031 LTK-204ENST00000561619 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC15.31■□□□□ 0.04
CLPXO76031 CSK-202ENST00000439220 1900 ntAPPRIS P1 TSL 2 BASIC15.31■□□□□ 0.04
CLPXO76031 SBSN-201ENST00000452271 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC15.31■□□□□ 0.04
CLPXO76031 CCDC40-201ENST00000269318 1970 ntTSL 2 BASIC15.31■□□□□ 0.04
CLPXO76031 RHOBTB2-206ENST00000522948 4959 ntAPPRIS ALT2 TSL 5 BASIC15.31■□□□□ 0.04
CLPXO76031 WDR20-202ENST00000322340 3060 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
CLPXO76031 AC023157.3-201ENST00000619086 2088 ntBASIC15.31■□□□□ 0.04
CLPXO76031 DEGS2-201ENST00000305631 4352 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
CLPXO76031 C14orf93-202ENST00000341470 2221 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
CLPXO76031 PDE4DIP-201ENST00000313431 5676 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
CLPXO76031 CCDC183-AS1-201ENST00000414656 2386 ntTSL 2 BASIC15.31■□□□□ 0.04
CLPXO76031 ILF2-202ENST00000368681 726 ntTSL 2 BASIC15.31■□□□□ 0.04
CLPXO76031 OARD1-201ENST00000373154 1129 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
CLPXO76031 KRTAP5-3-201ENST00000399685 899 ntAPPRIS P1 BASIC15.31■□□□□ 0.04
CLPXO76031 RNF144A-AS1-205ENST00000439208 757 ntTSL 3 BASIC15.31■□□□□ 0.04
CLPXO76031 KCTD7-202ENST00000443322 1160 ntAPPRIS ALT1 TSL 1 (best) BASIC15.31■□□□□ 0.04
CLPXO76031 ABCD4-228ENST00000557588 763 ntTSL 3 BASIC15.31■□□□□ 0.04
CLPXO76031 AL929554.1-201ENST00000568665 460 ntAPPRIS P1 TSL 3 BASIC15.31■□□□□ 0.04
CLPXO76031 TMEM114-203ENST00000620492 945 ntAPPRIS P1 TSL 2 BASIC15.31■□□□□ 0.04
CLPXO76031 ARFIP2-204ENST00000445086 1300 ntTSL 2 BASIC15.31■□□□□ 0.04
CLPXO76031 GAS2L2-201ENST00000604063 2661 ntAPPRIS ALT2 TSL 5 BASIC15.31■□□□□ 0.04
CLPXO76031 RCC2-202ENST00000375436 4087 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
CLPXO76031 PRKD2-216ENST00000601806 2906 ntAPPRIS ALT2 TSL 5 BASIC15.31■□□□□ 0.04
CLPXO76031 NR1H2-202ENST00000411902 1466 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
CLPXO76031 PRKD2-201ENST00000291281 3070 ntAPPRIS P3 TSL 1 (best) BASIC15.31■□□□□ 0.04
CLPXO76031 ACSL3-202ENST00000392066 3147 ntAPPRIS P1 TSL 5 BASIC15.31■□□□□ 0.04
CLPXO76031 THNSL2-203ENST00000377254 1560 ntTSL 2 BASIC15.31■□□□□ 0.04
CLPXO76031 AHDC1-201ENST00000247087 6334 ntAPPRIS P1 TSL 5 BASIC15.31■□□□□ 0.04
CLPXO76031 NUCKS1-201ENST00000367142 6496 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
CLPXO76031 HPDL-201ENST00000334815 1629 ntAPPRIS P1 BASIC15.31■□□□□ 0.04
CLPXO76031 CEACAM16-202ENST00000587331 1692 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
CLPXO76031 SPEG-205ENST00000396698 3379 ntTSL 5 BASIC15.31■□□□□ 0.04
CLPXO76031 ATP6V0D1-201ENST00000290949 1716 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
CLPXO76031 LYPLAL1-201ENST00000366927 1819 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
CLPXO76031 FBXL12-208ENST00000589626 1920 ntTSL 2 BASIC15.31■□□□□ 0.04
CLPXO76031 AL596087.1-201ENST00000400979 1969 ntBASIC15.31■□□□□ 0.04
CLPXO76031 SLC6A13-203ENST00000445055 1950 ntTSL 2 BASIC15.31■□□□□ 0.04
CLPXO76031 TTLL5-219ENST00000556977 1961 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
CLPXO76031 C7orf43-207ENST00000457641 2005 ntTSL 5 BASIC15.31■□□□□ 0.04
CLPXO76031 RRM1-214ENST00000534285 2075 ntTSL 5 BASIC15.31■□□□□ 0.04
CLPXO76031 GJB6-202ENST00000356192 2131 ntAPPRIS P1 TSL 2 BASIC15.31■□□□□ 0.04
CLPXO76031 SLFNL1-205ENST00000439569 2117 ntAPPRIS P3 TSL 2 BASIC15.31■□□□□ 0.04
CLPXO76031 CYP4X1-201ENST00000371901 2357 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
CLPXO76031 AL928970.1-201ENST00000422679 2923 ntTSL 5 BASIC15.3■□□□□ 0.04
CLPXO76031 MFSD14B-201ENST00000375344 3420 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
CLPXO76031 ZFAND4-203ENST00000374366 3821 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
CLPXO76031 CHD4-210ENST00000544040 6514 ntAPPRIS ALT2 TSL 5 BASIC15.3■□□□□ 0.04
CLPXO76031 MPG-201ENST00000219431 1193 ntAPPRIS P4 TSL 3 BASIC15.3■□□□□ 0.04
CLPXO76031 DAP-201ENST00000230895 2339 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
CLPXO76031 GPR6-201ENST00000275169 1089 ntAPPRIS P1 BASIC15.3■□□□□ 0.04
CLPXO76031 AIFM1-201ENST00000287295 2260 ntAPPRIS P4 TSL 1 (best) BASIC15.3■□□□□ 0.04
CLPXO76031 CIRBP-201ENST00000320936 1328 ntAPPRIS P3 TSL 1 (best) BASIC15.3■□□□□ 0.04
CLPXO76031 PTBP1-201ENST00000349038 3155 ntAPPRIS P3 TSL 1 (best) BASIC15.3■□□□□ 0.04
CLPXO76031 C6orf106-203ENST00000374026 4232 ntAPPRIS ALT2 TSL 2 BASIC15.3■□□□□ 0.04
CLPXO76031 FGFBP1-201ENST00000382333 1359 ntAPPRIS P1 TSL 3 BASIC15.3■□□□□ 0.04
CLPXO76031 TRPT1-202ENST00000394546 1058 ntAPPRIS ALT1 TSL 5 BASIC15.3■□□□□ 0.04
CLPXO76031 PTBP1-204ENST00000394601 3185 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
CLPXO76031 TOM1L2-203ENST00000395739 1766 ntTSL 2 BASIC15.3■□□□□ 0.04
CLPXO76031 AC125494.1-203ENST00000396799 1622 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
CLPXO76031 FBLN7-205ENST00000409903 1989 ntTSL 5 BASIC15.3■□□□□ 0.04
CLPXO76031 CKMT1A-202ENST00000413453 1911 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
CLPXO76031 ICAM1-202ENST00000423829 1296 ntTSL 2 BASIC15.3■□□□□ 0.04
CLPXO76031 FAHD2CP-202ENST00000443258 893 ntTSL 3 BASIC15.3■□□□□ 0.04
CLPXO76031 DMKN-213ENST00000447113 1611 ntAPPRIS ALT2 TSL 1 (best) BASIC15.3■□□□□ 0.04
CLPXO76031 AP001922.1-201ENST00000499390 1504 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
CLPXO76031 TRPT1-210ENST00000541278 941 ntTSL 2 BASIC15.3■□□□□ 0.04
CLPXO76031 STARD10-218ENST00000543304 1513 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
CLPXO76031 EPB41L3-206ENST00000544123 3972 ntAPPRIS ALT2 TSL 2 BASIC15.3■□□□□ 0.04
CLPXO76031 NEO1-207ENST00000560262 4315 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
CLPXO76031 AC005606.2-201ENST00000564438 614 ntTSL 2 BASIC15.3■□□□□ 0.04
CLPXO76031 TMEM249-203ENST00000565365 975 ntAPPRIS P2 TSL 3 BASIC15.3■□□□□ 0.04
CLPXO76031 CIRBP-207ENST00000586472 1303 ntAPPRIS P3 TSL 3 BASIC15.3■□□□□ 0.04
CLPXO76031 DMRTC2-204ENST00000596827 1675 ntTSL 2 BASIC15.3■□□□□ 0.04
CLPXO76031 Z94160.2-201ENST00000609322 910 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
CLPXO76031 THOC3-212ENST00000628318 1442 ntTSL 5 BASIC15.3■□□□□ 0.04
CLPXO76031 BBS1-225ENST00000630659 1934 ntTSL 5 BASIC15.3■□□□□ 0.04
CLPXO76031 BX276092.7-203ENST00000637198 1536 ntBASIC15.3■□□□□ 0.04
CLPXO76031 STAT5A-211ENST00000590949 3318 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
CLPXO76031 TRIM46-211ENST00000611379 3082 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
CLPXO76031 CHFR-204ENST00000443047 2990 ntTSL 2 BASIC15.3■□□□□ 0.04
CLPXO76031 AAK1-202ENST00000409068 2606 ntTSL 2 BASIC15.3■□□□□ 0.04
CLPXO76031 LRRFIP2-205ENST00000421276 2522 ntTSL 2 BASIC15.3■□□□□ 0.04
CLPXO76031 SMAP1-201ENST00000316999 2403 ntAPPRIS P3 TSL 1 (best) BASIC15.29■□□□□ 0.04
CLPXO76031 ESPNL-201ENST00000343063 4836 ntAPPRIS P1 TSL 2 BASIC15.29■□□□□ 0.04
CLPXO76031 PPT1-215ENST00000641471 2368 ntBASIC15.29■□□□□ 0.04
CLPXO76031 ZNF385A-201ENST00000338010 2331 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
CLPXO76031 MIRLET7BHG-203ENST00000435439 2264 ntTSL 2 BASIC15.29■□□□□ 0.04
CLPXO76031 CAMK2D-211ENST00000511664 2210 ntTSL 2 BASIC15.29■□□□□ 0.04
CLPXO76031 CLEC18A-209ENST00000615430 2215 ntAPPRIS P2 TSL 5 BASIC15.29■□□□□ 0.04
CLPXO76031 CLEC18C-211ENST00000618957 2215 ntAPPRIS P2 TSL 5 BASIC15.29■□□□□ 0.04
CLPXO76031 CLEC18B-205ENST00000619275 2215 ntAPPRIS ALT2 TSL 5 BASIC15.29■□□□□ 0.04
CLPXO76031 IQCE-204ENST00000404984 2086 ntAPPRIS ALT2 TSL 5 BASIC15.29■□□□□ 0.04
CLPXO76031 HSF5-201ENST00000323777 4094 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Retrieved 100 of 98,524 protein–RNA pairs in 40.2 ms