Protein–RNA interactions for Protein: O75909

CCNK, Cyclin-K, humanhuman

Predictions only

Length 580 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCNKO75909 AUTS2-217ENST00000611706 4583 ntTSL 5 BASIC14.6□□□□□ -0.07
CCNKO75909 JMJD6-205ENST00000585429 1330 ntTSL 5 BASIC14.6□□□□□ -0.07
CCNKO75909 EEF1AKMT3-201ENST00000300209 2563 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
CCNKO75909 FEM1B-201ENST00000306917 7122 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
CCNKO75909 MINDY2-203ENST00000559228 9238 ntAPPRIS P3 TSL 2 BASIC14.6□□□□□ -0.07
CCNKO75909 RPH3AL-201ENST00000323434 2809 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
CCNKO75909 RALGPS2-204ENST00000367635 5834 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
CCNKO75909 ABHD14B-201ENST00000315877 2236 ntTSL 5 BASIC14.6□□□□□ -0.07
CCNKO75909 UBE2I-207ENST00000406620 1842 ntAPPRIS P1 TSL 2 BASIC14.59□□□□□ -0.07
CCNKO75909 ZNF557-201ENST00000252840 2268 ntAPPRIS P3 TSL 1 (best) BASIC14.59□□□□□ -0.07
CCNKO75909 RUBCN-206ENST00000449205 1603 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
CCNKO75909 ZBTB32-202ENST00000392197 2068 ntAPPRIS P1 TSL 5 BASIC14.59□□□□□ -0.07
CCNKO75909 HECW1-203ENST00000453890 5169 ntAPPRIS ALT2 TSL 2 BASIC14.59□□□□□ -0.07
CCNKO75909 NPM2-203ENST00000397940 1874 ntAPPRIS P2 TSL 2 BASIC14.59□□□□□ -0.07
CCNKO75909 PCED1B-202ENST00000546455 2328 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
CCNKO75909 GPANK1-205ENST00000375906 2793 ntAPPRIS P1 TSL 2 BASIC14.59□□□□□ -0.07
CCNKO75909 TIMM8A-201ENST00000372902 1664 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
CCNKO75909 SIGLEC7-201ENST00000305628 1469 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
CCNKO75909 NFIX-209ENST00000587760 1487 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
CCNKO75909 IQCA1L-203ENST00000615129 2606 ntAPPRIS P1 TSL 5 BASIC14.59□□□□□ -0.07
CCNKO75909 SDCBP-201ENST00000260130 2167 ntAPPRIS P3 TSL 1 (best) BASIC14.59□□□□□ -0.07
CCNKO75909 MYH7-201ENST00000355349 6087 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
CCNKO75909 ADM5-201ENST00000420022 1718 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
CCNKO75909 ZNF785-202ENST00000470110 2867 ntAPPRIS ALT2 TSL 2 BASIC14.59□□□□□ -0.07
CCNKO75909 PIN1-201ENST00000247970 997 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
CCNKO75909 XBP1-202ENST00000344347 1131 ntTSL 5 BASIC14.59□□□□□ -0.07
CCNKO75909 CD47-202ENST00000361309 1285 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
CCNKO75909 CCT7-202ENST00000398422 1234 ntTSL 2 BASIC14.59□□□□□ -0.07
CCNKO75909 AC007952.1-201ENST00000399087 553 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
CCNKO75909 AC007952.2-202ENST00000399093 556 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
CCNKO75909 MAGI2-AS3-202ENST00000422093 762 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
CCNKO75909 AL596442.1-201ENST00000429305 429 ntTSL 2 BASIC14.59□□□□□ -0.07
CCNKO75909 AC226101.2-201ENST00000458252 747 ntTSL 2 BASIC14.59□□□□□ -0.07
CCNKO75909 LINC02199-203ENST00000510229 496 ntTSL 3 BASIC14.59□□□□□ -0.07
CCNKO75909 ZFPL1-203ENST00000525509 478 ntTSL 2 BASIC14.59□□□□□ -0.07
CCNKO75909 AP002433.1-201ENST00000525548 964 ntTSL 3 BASIC14.59□□□□□ -0.07
CCNKO75909 CFL1-211ENST00000531407 1062 ntTSL 2 BASIC14.59□□□□□ -0.07
CCNKO75909 B3GAT3-205ENST00000534026 1120 ntTSL 2 BASIC14.59□□□□□ -0.07
CCNKO75909 RARRES2P10-201ENST00000564312 460 ntBASIC14.59□□□□□ -0.07
CCNKO75909 AC007493.2-201ENST00000568427 478 ntTSL 3 BASIC14.59□□□□□ -0.07
CCNKO75909 IMPA2-208ENST00000589238 923 ntTSL 3 BASIC14.59□□□□□ -0.07
CCNKO75909 AC018730.2-201ENST00000598623 443 ntTSL 5 BASIC14.59□□□□□ -0.07
CCNKO75909 IL15RA-222ENST00000622442 1160 ntAPPRIS ALT2 TSL 1 (best) BASIC14.59□□□□□ -0.07
CCNKO75909 AC106017.2-202ENST00000628484 536 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
CCNKO75909 TBCE-201ENST00000366601 1966 ntAPPRIS P3 TSL 1 (best) BASIC14.59□□□□□ -0.07
CCNKO75909 TMEM189-203ENST00000371656 1973 ntTSL 2 BASIC14.59□□□□□ -0.07
CCNKO75909 RFX1-201ENST00000254325 4332 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
CCNKO75909 HLA-B-249ENST00000412585 1547 ntAPPRIS P1 BASIC14.59□□□□□ -0.07
CCNKO75909 KIF1C-201ENST00000320785 7919 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
CCNKO75909 KCNK4-TEX40-201ENST00000539086 2733 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
CCNKO75909 NAT6-201ENST00000354862 1330 ntAPPRIS P3 TSL 1 (best) BASIC14.59□□□□□ -0.07
CCNKO75909 SMN1-209ENST00000514951 1308 ntTSL 2 BASIC14.59□□□□□ -0.07
CCNKO75909 CLEC16A-203ENST00000409790 6891 ntAPPRIS P1 TSL 5 BASIC14.59□□□□□ -0.07
CCNKO75909 MSH5-203ENST00000375750 2775 ntAPPRIS P3 TSL 1 (best) BASIC14.59□□□□□ -0.07
CCNKO75909 TBC1D1-201ENST00000261439 5700 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
CCNKO75909 CRY2-201ENST00000417225 2053 ntTSL 2 BASIC14.59□□□□□ -0.07
CCNKO75909 DTX3-204ENST00000548804 2067 ntAPPRIS P3 TSL 5 BASIC14.59□□□□□ -0.07
CCNKO75909 MAPK7-203ENST00000395602 3059 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
CCNKO75909 SLCO4C1-201ENST00000310954 5334 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
CCNKO75909 UVRAG-201ENST00000356136 4123 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
CCNKO75909 TOP3B-201ENST00000357179 2863 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
CCNKO75909 AC244021.1-201ENST00000417218 3662 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
CCNKO75909 TRIM17-203ENST00000366697 2652 ntAPPRIS P1 TSL 2 BASIC14.59□□□□□ -0.07
CCNKO75909 PDE1B-207ENST00000550620 2150 ntTSL 1 (best) BASIC14.58□□□□□ -0.07
CCNKO75909 FBXO3-203ENST00000526785 5798 ntTSL 1 (best) BASIC14.58□□□□□ -0.07
CCNKO75909 ANKMY1-204ENST00000391987 3221 ntTSL 5 BASIC14.58□□□□□ -0.07
CCNKO75909 AKIP1-207ENST00000529876 1421 ntTSL 2 BASIC14.58□□□□□ -0.07
CCNKO75909 ASTN2-206ENST00000361477 4001 ntTSL 5 BASIC14.58□□□□□ -0.07
CCNKO75909 TTLL5-219ENST00000556977 1961 ntTSL 1 (best) BASIC14.58□□□□□ -0.07
CCNKO75909 LPAR3-201ENST00000370611 1720 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.07
CCNKO75909 MRGPRF-AS1-201ENST00000538407 1490 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
CCNKO75909 TUB-AS1-201ENST00000506601 2021 ntTSL 2 BASIC14.58□□□□□ -0.08
CCNKO75909 NWD2-201ENST00000309447 8325 ntAPPRIS P1 TSL 5 BASIC14.58□□□□□ -0.08
CCNKO75909 SPATA21-205ENST00000540400 1773 ntAPPRIS ALT2 TSL 1 (best) BASIC14.58□□□□□ -0.08
CCNKO75909 GLIDR-204ENST00000638724 1765 ntTSL 5 BASIC14.58□□□□□ -0.08
CCNKO75909 SLC13A5-203ENST00000433363 3435 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
CCNKO75909 THSD4-202ENST00000355327 9200 ntAPPRIS P1 TSL 5 BASIC14.58□□□□□ -0.08
CCNKO75909 RBFOX1-205ENST00000436368 1530 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
CCNKO75909 CYP51A1P1-201ENST00000492267 1507 ntBASIC14.58□□□□□ -0.08
CCNKO75909 LIPE-AS1-205ENST00000594688 2383 ntTSL 2 BASIC14.58□□□□□ -0.08
CCNKO75909 CKLF-201ENST00000264001 669 ntAPPRIS P4 TSL 1 (best) BASIC14.58□□□□□ -0.08
CCNKO75909 TSTD1-201ENST00000318289 626 ntAPPRIS P3 TSL 1 (best) BASIC14.58□□□□□ -0.08
CCNKO75909 PTPMT1-202ENST00000326674 768 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
CCNKO75909 SBK2-201ENST00000344158 1056 ntAPPRIS P1 TSL 2 BASIC14.58□□□□□ -0.08
CCNKO75909 C6orf48-205ENST00000375640 1053 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
CCNKO75909 HOXA9-202ENST00000396345 797 ntTSL 2 BASIC14.58□□□□□ -0.08
CCNKO75909 KRASP1-201ENST00000407852 552 ntBASIC14.58□□□□□ -0.08
CCNKO75909 SBK2-202ENST00000413299 1085 ntAPPRIS P1 TSL 5 BASIC14.58□□□□□ -0.08
CCNKO75909 NELFE-206ENST00000444811 1202 ntAPPRIS ALT2 TSL 2 BASIC14.58□□□□□ -0.08
CCNKO75909 LINC00841-201ENST00000451929 2126 ntTSL 2 BASIC14.58□□□□□ -0.08
CCNKO75909 LINC01881-205ENST00000456398 1235 ntTSL 5 BASIC14.58□□□□□ -0.08
CCNKO75909 ZNF529-AS1-202ENST00000475219 1033 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
CCNKO75909 SCARA5-203ENST00000518030 1074 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
CCNKO75909 UNC93B5-201ENST00000530315 699 ntBASIC14.58□□□□□ -0.08
CCNKO75909 AC010336.4-201ENST00000595655 438 ntTSL 5 BASIC14.58□□□□□ -0.08
CCNKO75909 TMEM191B-201ENST00000612978 1220 ntAPPRIS P2 TSL 5 BASIC14.58□□□□□ -0.08
CCNKO75909 HIST1H2AL-201ENST00000613174 393 ntAPPRIS P1 BASIC14.58□□□□□ -0.08
CCNKO75909 AL023875.1-201ENST00000640777 796 ntBASIC14.58□□□□□ -0.08
CCNKO75909 FZD5-201ENST00000295417 6708 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
CCNKO75909 CHAF1A-201ENST00000301280 3339 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Retrieved 100 of 98,524 protein–RNA pairs in 34.6 ms