Protein–RNA interactions for Protein: O75445

USH2A, Usherin, humanhuman

Predictions only

Length 5,202 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USH2AO75445 MARK3-206ENST00000440884 2643 ntTSL 1 (best) BASIC7.36□□□□□ -1.23
USH2AO75445 DNASE1L2-204ENST00000567494 1301 ntTSL 1 (best) BASIC7.36□□□□□ -1.23
USH2AO75445 WTAP-205ENST00000614346 1623 ntTSL 2 BASIC7.36□□□□□ -1.23
USH2AO75445 REEP2-201ENST00000254901 2099 ntAPPRIS P3 TSL 1 (best) BASIC7.36□□□□□ -1.23
USH2AO75445 MRFAP1-205ENST00000617365 2112 ntTSL 5 BASIC7.36□□□□□ -1.23
USH2AO75445 MIS18BP1-212ENST00000627697 1950 ntTSL 5 BASIC7.36□□□□□ -1.23
USH2AO75445 ANKRD53-202ENST00000360589 1666 ntAPPRIS ALT2 TSL 2 BASIC7.36□□□□□ -1.23
USH2AO75445 STRADB-202ENST00000392249 2190 ntTSL 1 (best) BASIC7.36□□□□□ -1.23
USH2AO75445 NINJ2-201ENST00000305108 1252 ntAPPRIS P3 TSL 1 (best) BASIC7.36□□□□□ -1.23
USH2AO75445 MRNIP-202ENST00000376931 1004 ntAPPRIS ALT2 TSL 2 BASIC7.36□□□□□ -1.23
USH2AO75445 ADAMTSL1-208ENST00000380570 931 ntTSL 1 (best) BASIC7.36□□□□□ -1.23
USH2AO75445 NUDT1-205ENST00000397048 783 ntTSL 1 (best) BASIC7.36□□□□□ -1.23
USH2AO75445 AL161638.1-201ENST00000420354 481 ntTSL 3 BASIC7.36□□□□□ -1.23
USH2AO75445 AL158071.2-201ENST00000423380 815 ntTSL 3 BASIC7.36□□□□□ -1.23
USH2AO75445 RPL28-203ENST00000428193 573 ntTSL 2 BASIC7.36□□□□□ -1.23
USH2AO75445 AL162726.2-201ENST00000438986 1017 ntBASIC7.36□□□□□ -1.23
USH2AO75445 GLYCTK-204ENST00000471180 992 ntTSL 2 BASIC7.36□□□□□ -1.23
USH2AO75445 AC124301.1-201ENST00000524885 602 ntTSL 3 BASIC7.36□□□□□ -1.23
USH2AO75445 AC104241.2-201ENST00000532748 789 ntTSL 3 BASIC7.36□□□□□ -1.23
USH2AO75445 MSRB3-209ENST00000540804 884 ntTSL 2 BASIC7.36□□□□□ -1.23
USH2AO75445 RPL28-207ENST00000558815 616 ntTSL 2 BASIC7.36□□□□□ -1.23
USH2AO75445 AC006116.8-201ENST00000587004 987 ntTSL 2 BASIC7.36□□□□□ -1.23
USH2AO75445 C19orf38-203ENST00000592854 1060 ntAPPRIS P1 TSL 5 BASIC7.36□□□□□ -1.23
USH2AO75445 WT1-AS_6.1-201ENST00000614919 121 ntBASIC7.36□□□□□ -1.23
USH2AO75445 CLDN14-204ENST00000399137 1942 ntAPPRIS P1 TSL 1 (best) BASIC7.36□□□□□ -1.23
USH2AO75445 ADORA2A-201ENST00000337539 2569 ntAPPRIS P1 TSL 1 (best) BASIC7.36□□□□□ -1.23
USH2AO75445 PLD3-207ENST00000409735 2140 ntAPPRIS P1 TSL 1 (best) BASIC7.36□□□□□ -1.23
USH2AO75445 BAGE2-202ENST00000474011 1482 ntTSL 2 BASIC7.36□□□□□ -1.23
USH2AO75445 PRSS36-201ENST00000268281 2840 ntAPPRIS P3 TSL 1 (best) BASIC7.36□□□□□ -1.23
USH2AO75445 EVL-202ENST00000402714 2353 ntAPPRIS ALT1 TSL 1 (best) BASIC7.36□□□□□ -1.23
USH2AO75445 FAM219B-204ENST00000563119 2721 ntAPPRIS P1 TSL 1 (best) BASIC7.36□□□□□ -1.23
USH2AO75445 GCDH-216ENST00000591470 1867 ntAPPRIS P1 TSL 1 (best) BASIC7.36□□□□□ -1.23
USH2AO75445 CCDC43-201ENST00000315286 2082 ntAPPRIS P2 TSL 1 (best) BASIC7.36□□□□□ -1.23
USH2AO75445 EVX1-202ENST00000496902 2955 ntAPPRIS P1 TSL 1 (best) BASIC7.36□□□□□ -1.23
USH2AO75445 ARPC5-201ENST00000294742 1637 ntAPPRIS ALT1 TSL 1 (best) BASIC7.36□□□□□ -1.23
USH2AO75445 AL353705.2-201ENST00000428243 662 ntBASIC7.36□□□□□ -1.23
USH2AO75445 AC093904.1-201ENST00000474561 455 ntTSL 3 BASIC7.36□□□□□ -1.23
USH2AO75445 SUOX-214ENST00000551841 906 ntTSL 3 BASIC7.36□□□□□ -1.23
USH2AO75445 AL033527.5-202ENST00000641632 1098 ntBASIC7.36□□□□□ -1.23
USH2AO75445 CRYM-201ENST00000219599 1471 ntAPPRIS P1 TSL 1 (best) BASIC7.36□□□□□ -1.23
USH2AO75445 NTRK1-206ENST00000524377 2432 ntAPPRIS P3 TSL 1 (best) BASIC7.36□□□□□ -1.23
USH2AO75445 RPS5-202ENST00000596046 1520 ntAPPRIS P1 TSL 1 (best) BASIC7.36□□□□□ -1.23
USH2AO75445 CDK3-202ENST00000448471 1570 ntAPPRIS P1 TSL 5 BASIC7.36□□□□□ -1.23
USH2AO75445 BID-205ENST00000399774 2167 ntAPPRIS P1 TSL 1 (best) BASIC7.36□□□□□ -1.23
USH2AO75445 MEN1-203ENST00000337652 3162 ntAPPRIS P3 TSL 5 BASIC7.36□□□□□ -1.23
USH2AO75445 PCSK5-202ENST00000376767 2845 ntTSL 2 BASIC7.36□□□□□ -1.23
USH2AO75445 NCAPH2-205ENST00000420993 2037 ntAPPRIS P3 TSL 1 (best) BASIC7.36□□□□□ -1.23
USH2AO75445 AC133561.2-201ENST00000380145 1802 ntTSL 2 BASIC7.36□□□□□ -1.23
USH2AO75445 KRT8P22-201ENST00000562317 1415 ntBASIC7.36□□□□□ -1.23
USH2AO75445 MIOX-202ENST00000395732 1658 ntTSL 1 (best) BASIC7.36□□□□□ -1.23
USH2AO75445 NAT8-201ENST00000272425 947 ntAPPRIS P1 TSL 1 (best) BASIC7.36□□□□□ -1.23
USH2AO75445 GBGT1-201ENST00000372036 871 ntTSL 3 BASIC7.36□□□□□ -1.23
USH2AO75445 SNHG17-201ENST00000413755 648 ntTSL 3 BASIC7.36□□□□□ -1.23
USH2AO75445 FAM197Y5-201ENST00000423213 765 ntTSL 5 BASIC7.36□□□□□ -1.23
USH2AO75445 AC073133.1-201ENST00000426187 432 ntTSL 3 BASIC7.36□□□□□ -1.23
USH2AO75445 LINC02158-201ENST00000432377 897 ntTSL 1 (best) BASIC7.36□□□□□ -1.23
USH2AO75445 HIST3H2BA-201ENST00000436555 524 ntBASIC7.36□□□□□ -1.23
USH2AO75445 AL157834.2-201ENST00000451737 663 ntTSL 1 (best) BASIC7.36□□□□□ -1.23
USH2AO75445 SERBP1P3-201ENST00000459980 809 ntBASIC7.36□□□□□ -1.23
USH2AO75445 TGIF1-218ENST00000551402 1089 ntTSL 2 BASIC7.36□□□□□ -1.23
USH2AO75445 AL031600.1-201ENST00000563610 570 ntTSL 4 BASIC7.36□□□□□ -1.23
USH2AO75445 AC025259.3-202ENST00000564363 687 ntTSL 2 BASIC7.36□□□□□ -1.23
USH2AO75445 AL133499.1-201ENST00000596207 608 ntBASIC7.36□□□□□ -1.23
USH2AO75445 LINC00116-203ENST00000611969 441 ntAPPRIS ALT2 TSL 1 (best) BASIC7.36□□□□□ -1.23
USH2AO75445 LINC00592-202ENST00000640420 768 ntTSL 5 BASIC7.36□□□□□ -1.23
USH2AO75445 C11orf80-214ENST00000532565 1948 ntAPPRIS ALT2 TSL 5 BASIC7.36□□□□□ -1.23
USH2AO75445 ACOT4-201ENST00000326303 2362 ntAPPRIS P1 TSL 1 (best) BASIC7.36□□□□□ -1.23
USH2AO75445 LONRF1-208ENST00000533751 3043 ntTSL 5 BASIC7.36□□□□□ -1.23
USH2AO75445 RABL2A-204ENST00000393167 2179 ntAPPRIS P3 TSL 1 (best) BASIC7.36□□□□□ -1.23
USH2AO75445 RTL8B-201ENST00000391440 2026 ntAPPRIS P1 BASIC7.36□□□□□ -1.23
USH2AO75445 BIN2-210ENST00000615107 2255 ntAPPRIS P1 TSL 1 (best) BASIC7.36□□□□□ -1.23
USH2AO75445 WAS-201ENST00000376701 1849 ntAPPRIS P1 TSL 1 (best) BASIC7.36□□□□□ -1.23
USH2AO75445 LARGE2-208ENST00000531526 2528 ntAPPRIS P3 TSL 2 BASIC7.36□□□□□ -1.23
USH2AO75445 EPHA10-201ENST00000319637 2050 ntTSL 1 (best) BASIC7.36□□□□□ -1.23
USH2AO75445 AC100830.1-201ENST00000560387 1609 ntTSL 2 BASIC7.36□□□□□ -1.23
USH2AO75445 DOK7-203ENST00000507039 2551 ntTSL 2 BASIC7.36□□□□□ -1.23
USH2AO75445 MPL-202ENST00000413998 1887 ntAPPRIS ALT2 TSL 1 (best) BASIC7.36□□□□□ -1.23
USH2AO75445 NDUFV1-223ENST00000532303 1493 ntTSL 2 BASIC7.36□□□□□ -1.23
USH2AO75445 DMRT2-201ENST00000259622 2459 ntTSL 2 BASIC7.36□□□□□ -1.23
USH2AO75445 MAP2K6-209ENST00000613873 1509 ntTSL 1 (best) BASIC7.35□□□□□ -1.23
USH2AO75445 MEMO1-204ENST00000407893 682 ntTSL 5 BASIC7.35□□□□□ -1.23
USH2AO75445 SPDYE17-201ENST00000412399 783 ntBASIC7.35□□□□□ -1.23
USH2AO75445 GDAP1-202ENST00000434412 1228 ntTSL 1 (best) BASIC7.35□□□□□ -1.23
USH2AO75445 AC090502.1-201ENST00000549905 748 ntTSL 1 (best) BASIC7.35□□□□□ -1.23
USH2AO75445 AC090502.1-204ENST00000551210 469 ntTSL 2 BASIC7.35□□□□□ -1.23
USH2AO75445 AC091167.2-201ENST00000579581 588 ntBASIC7.35□□□□□ -1.23
USH2AO75445 COX6B1-204ENST00000592141 660 ntAPPRIS P1 TSL 3 BASIC7.35□□□□□ -1.23
USH2AO75445 COPS9-205ENST00000607357 418 ntAPPRIS P1 TSL 1 (best) BASIC7.35□□□□□ -1.23
USH2AO75445 FP565260.5-201ENST00000623188 479 ntTSL 3 BASIC7.35□□□□□ -1.23
USH2AO75445 NHEG1-202ENST00000432330 1357 ntTSL 1 (best) BASIC7.35□□□□□ -1.23
USH2AO75445 SLC25A3-217ENST00000552981 1351 ntAPPRIS ALT1 TSL 1 (best) BASIC7.35□□□□□ -1.23
USH2AO75445 ELF2-207ENST00000510408 1965 ntTSL 1 (best) BASIC7.35□□□□□ -1.23
USH2AO75445 LONP1-215ENST00000593119 2918 ntTSL 2 BASIC7.35□□□□□ -1.23
USH2AO75445 CD209-207ENST00000593660 1497 ntAPPRIS ALT2 TSL 1 (best) BASIC7.35□□□□□ -1.23
USH2AO75445 NETO1-207ENST00000583169 2357 ntAPPRIS P1 TSL 1 (best) BASIC7.35□□□□□ -1.23
USH2AO75445 NFIC-210ENST00000590282 1558 ntTSL 2 BASIC7.35□□□□□ -1.23
USH2AO75445 ATP5H-201ENST00000301587 603 ntAPPRIS P1 TSL 1 (best) BASIC7.35□□□□□ -1.23
USH2AO75445 TNNT2-206ENST00000367320 1007 ntTSL 1 (best) BASIC7.35□□□□□ -1.23
USH2AO75445 TPD52L2-207ENST00000369927 1094 ntTSL 4 BASIC7.35□□□□□ -1.23
USH2AO75445 AL157902.1-202ENST00000425010 763 ntTSL 3 BASIC7.35□□□□□ -1.23
Retrieved 100 of 98,524 protein–RNA pairs in 47.9 ms