Protein–RNA interactions for Protein: O75309

CDH16, Cadherin-16, humanhuman

Predictions only

Length 829 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH16O75309 TTC29-202ENST00000398886 1729 ntAPPRIS ALT2 TSL 5 BASIC17.03■□□□□ 0.32
CDH16O75309 PROSER1-211ENST00000625998 5102 ntAPPRIS ALT2 TSL 5 BASIC17.03■□□□□ 0.32
CDH16O75309 GHDC-207ENST00000587427 2396 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
CDH16O75309 HSPB7-204ENST00000411503 2128 ntAPPRIS ALT1 TSL 1 (best) BASIC17.03■□□□□ 0.32
CDH16O75309 GGT3P-204ENST00000453783 1664 ntBASIC17.03■□□□□ 0.32
CDH16O75309 PRMT2-208ENST00000451211 1878 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
CDH16O75309 SCLT1-208ENST00000506368 2096 ntAPPRIS ALT2 TSL 1 (best) BASIC17.03■□□□□ 0.32
CDH16O75309 GPAT2-204ENST00000453542 2466 ntTSL 2 BASIC17.03■□□□□ 0.32
CDH16O75309 GP5-201ENST00000401815 3534 ntAPPRIS P1 BASIC17.03■□□□□ 0.32
CDH16O75309 OTX1-201ENST00000282549 2861 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
CDH16O75309 OTX1-202ENST00000366671 2861 ntAPPRIS P1 TSL 3 BASIC17.03■□□□□ 0.32
CDH16O75309 AC126177.1-201ENST00000547829 2218 ntBASIC17.02■□□□□ 0.32
CDH16O75309 RAD51D-201ENST00000335858 1353 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
CDH16O75309 TBC1D9B-202ENST00000356834 5173 ntAPPRIS ALT2 TSL 1 (best) BASIC17.02■□□□□ 0.32
CDH16O75309 TSC2-201ENST00000219476 6156 ntAPPRIS P3 TSL 5 BASIC17.02■□□□□ 0.32
CDH16O75309 TRIP10-201ENST00000313244 2153 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
CDH16O75309 KTN1-AS1-202ENST00000412224 2185 ntTSL 2 BASIC17.02■□□□□ 0.32
CDH16O75309 CHID1-201ENST00000323578 3374 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
CDH16O75309 TRIM24-202ENST00000415680 3799 ntAPPRIS ALT2 TSL 1 (best) BASIC17.02■□□□□ 0.32
CDH16O75309 USF2-202ENST00000343550 1523 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
CDH16O75309 TFAP2D-201ENST00000008391 1711 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
CDH16O75309 ANXA11-203ENST00000422982 2534 ntAPPRIS P3 TSL 1 (best) BASIC17.02■□□□□ 0.32
CDH16O75309 CAPRIN1-207ENST00000529307 2266 ntAPPRIS ALT2 TSL 2 BASIC17.02■□□□□ 0.32
CDH16O75309 C16orf89-201ENST00000315997 1872 ntAPPRIS P3 TSL 1 (best) BASIC17.02■□□□□ 0.32
CDH16O75309 SLFNL1-203ENST00000372611 1865 ntAPPRIS ALT2 TSL 2 BASIC17.02■□□□□ 0.32
CDH16O75309 HNRNPRP1-201ENST00000453465 1695 ntBASIC17.02■□□□□ 0.32
CDH16O75309 PYDC1-201ENST00000302964 813 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
CDH16O75309 PSMA7-201ENST00000370858 925 ntTSL 2 BASIC17.02■□□□□ 0.32
CDH16O75309 PSMA7-203ENST00000370873 996 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
CDH16O75309 AL391650.1-205ENST00000433939 579 ntAPPRIS P1 TSL 3 BASIC17.02■□□□□ 0.32
CDH16O75309 NUS1P1-201ENST00000446295 882 ntBASIC17.02■□□□□ 0.32
CDH16O75309 LINC00882-201ENST00000473636 710 ntTSL 3 BASIC17.02■□□□□ 0.32
CDH16O75309 ULK4P3-205ENST00000568486 1158 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
CDH16O75309 CENPX-206ENST00000580435 710 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
CDH16O75309 YIPF2-209ENST00000590329 958 ntTSL 5 BASIC17.02■□□□□ 0.32
CDH16O75309 AC011467.2-201ENST00000598425 242 ntBASIC17.02■□□□□ 0.32
CDH16O75309 AC027682.4-201ENST00000605277 798 ntTSL 5 BASIC17.02■□□□□ 0.32
CDH16O75309 AC010331.1-201ENST00000611423 582 ntBASIC17.02■□□□□ 0.32
CDH16O75309 AC005258.1-201ENST00000621615 1268 ntAPPRIS P1 TSL 2 BASIC17.02■□□□□ 0.32
CDH16O75309 FAM222B-202ENST00000452648 2836 ntAPPRIS P1 TSL 2 BASIC17.02■□□□□ 0.32
CDH16O75309 AC012485.3-201ENST00000637634 2424 ntTSL 5 BASIC17.02■□□□□ 0.32
CDH16O75309 COQ8B-201ENST00000243583 2041 ntAPPRIS ALT2 TSL 1 (best) BASIC17.02■□□□□ 0.32
CDH16O75309 WDR88-202ENST00000361680 1835 ntAPPRIS ALT2 TSL 1 (best) BASIC17.02■□□□□ 0.31
CDH16O75309 PSEN2-211ENST00000626989 1972 ntTSL 5 BASIC17.02■□□□□ 0.31
CDH16O75309 RNF182-206ENST00000537388 3274 ntAPPRIS P1 TSL 2 BASIC17.02■□□□□ 0.31
CDH16O75309 AFTPH-201ENST00000238855 4113 ntAPPRIS ALT1 TSL 5 BASIC17.02■□□□□ 0.31
CDH16O75309 MIEF1-202ENST00000402881 2269 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
CDH16O75309 ZNF580-202ENST00000543039 1707 ntAPPRIS P1 BASIC17.01■□□□□ 0.31
CDH16O75309 ARHGEF1-204ENST00000378152 2986 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
CDH16O75309 PCDHA12-201ENST00000398631 5233 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
CDH16O75309 MXD1-201ENST00000264444 5587 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
CDH16O75309 GSTM4-201ENST00000326729 1321 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
CDH16O75309 CCDC74A-206ENST00000467992 1347 ntAPPRIS ALT2 TSL 1 (best) BASIC17.01■□□□□ 0.31
CDH16O75309 HLA-DQB2-231ENST00000435145 2026 ntBASIC17.01■□□□□ 0.31
CDH16O75309 CCT6A-202ENST00000335503 2529 ntTSL 5 BASIC17.01■□□□□ 0.31
CDH16O75309 WDR18-204ENST00000587001 1465 ntTSL 5 BASIC17.01■□□□□ 0.31
CDH16O75309 MON2-201ENST00000393629 5612 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
CDH16O75309 MOB3B-201ENST00000262244 6454 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
CDH16O75309 SHANK1-204ENST00000391814 6622 ntAPPRIS ALT2 TSL 5 BASIC17.01■□□□□ 0.31
CDH16O75309 ZC3H7B-201ENST00000352645 5909 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
CDH16O75309 EIF2B4-206ENST00000451130 1633 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
CDH16O75309 AP001372.2-201ENST00000526036 2493 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
CDH16O75309 AC093901.1-201ENST00000414886 778 ntTSL 5 BASIC17.01■□□□□ 0.31
CDH16O75309 AC004540.1-203ENST00000421862 907 ntTSL 5 BASIC17.01■□□□□ 0.31
CDH16O75309 TSPY22P-201ENST00000427496 604 ntBASIC17.01■□□□□ 0.31
CDH16O75309 AC105935.2-201ENST00000435478 544 ntTSL 4 BASIC17.01■□□□□ 0.31
CDH16O75309 ZNF655-215ENST00000440391 1198 ntTSL 2 BASIC17.01■□□□□ 0.31
CDH16O75309 IFI27L1-206ENST00000554562 571 ntTSL 3 BASIC17.01■□□□□ 0.31
CDH16O75309 AC104758.1-202ENST00000568184 602 ntTSL 3 BASIC17.01■□□□□ 0.31
CDH16O75309 AC104971.2-201ENST00000588144 1209 ntTSL 2 BASIC17.01■□□□□ 0.31
CDH16O75309 FUT6-212ENST00000592563 1095 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
CDH16O75309 BDKRB1-204ENST00000611804 1085 ntAPPRIS P1 BASIC17.01■□□□□ 0.31
CDH16O75309 COL26A1-203ENST00000613501 2970 ntAPPRIS ALT2 TSL 1 (best) BASIC17.01■□□□□ 0.31
CDH16O75309 MRFAP1-205ENST00000617365 2112 ntTSL 5 BASIC17.01■□□□□ 0.31
CDH16O75309 ISOC2-201ENST00000085068 1122 ntTSL 2 BASIC17.01■□□□□ 0.31
CDH16O75309 MITF-204ENST00000352241 4814 ntAPPRIS ALT1 TSL 1 (best) BASIC17.01■□□□□ 0.31
CDH16O75309 CHMP1A-202ENST00000535997 2295 ntTSL 2 BASIC17.01■□□□□ 0.31
CDH16O75309 DFFA-201ENST00000377036 1403 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
CDH16O75309 SHISA5-209ENST00000443308 1933 ntTSL 2 BASIC17.01■□□□□ 0.31
CDH16O75309 LINC00668-206ENST00000581725 1902 ntTSL 2 BASIC17.01■□□□□ 0.31
CDH16O75309 RAP1GDS1-203ENST00000380158 2085 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
CDH16O75309 TBL2-205ENST00000432538 1573 ntTSL 2 BASIC17.01■□□□□ 0.31
CDH16O75309 PITPNM1-201ENST00000356404 4225 ntAPPRIS P3 TSL 1 (best) BASIC17.01■□□□□ 0.31
CDH16O75309 GGT4P-201ENST00000623672 1708 ntBASIC17.01■□□□□ 0.31
CDH16O75309 SMIM13-202ENST00000416247 4688 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
CDH16O75309 F3-202ENST00000370207 1879 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
CDH16O75309 MRPL49-201ENST00000279242 2019 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
CDH16O75309 BSCL2-201ENST00000278893 1364 ntAPPRIS ALT2 TSL 2 BASIC17.01■□□□□ 0.31
CDH16O75309 RBFADN-201ENST00000562391 1350 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
CDH16O75309 GATA4-206ENST00000528712 2614 ntTSL 2 BASIC17■□□□□ 0.31
CDH16O75309 LINC01657-201ENST00000457217 1809 ntTSL 1 (best) BASIC17■□□□□ 0.31
CDH16O75309 ASAH1-231ENST00000636577 2129 ntTSL 5 BASIC17■□□□□ 0.31
CDH16O75309 ARL15-201ENST00000502271 3248 ntTSL 1 (best) BASIC17■□□□□ 0.31
CDH16O75309 BRF1-201ENST00000327359 2292 ntTSL 2 BASIC17■□□□□ 0.31
CDH16O75309 MUL1-201ENST00000264198 2438 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
CDH16O75309 TSPAN32-201ENST00000182290 1318 ntAPPRIS P2 TSL 1 (best) BASIC17■□□□□ 0.31
CDH16O75309 TSPAN32-217ENST00000612299 1301 ntTSL 5 BASIC17■□□□□ 0.31
CDH16O75309 BSG-202ENST00000346916 1605 ntTSL 1 (best) BASIC17■□□□□ 0.31
CDH16O75309 AKR1B15-202ENST00000457545 1621 ntAPPRIS P1 TSL 5 BASIC17■□□□□ 0.31
CDH16O75309 MGEA5-203ENST00000370094 3314 ntTSL 1 (best) BASIC17■□□□□ 0.31
Retrieved 100 of 98,524 protein–RNA pairs in 64 ms