Protein–RNA interactions for Protein: O60330

PCDHGA12, Protocadherin gamma-A12, humanhuman

Predictions only

Length 932 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA12O60330 TTC8-202ENST00000345383 2329 ntTSL 5 BASIC16.67■□□□□ 0.26
PCDHGA12O60330 ARHGAP4-204ENST00000393721 2721 ntTSL 5 BASIC16.67■□□□□ 0.26
PCDHGA12O60330 KCNE3-201ENST00000310128 3143 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
PCDHGA12O60330 LUC7L-202ENST00000337351 2097 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
PCDHGA12O60330 ZNF710-201ENST00000268154 4617 ntAPPRIS P1 TSL 2 BASIC16.67■□□□□ 0.26
PCDHGA12O60330 VCX3A-201ENST00000381089 995 ntAPPRIS P2 TSL 1 (best) BASIC16.67■□□□□ 0.26
PCDHGA12O60330 RPL30-202ENST00000396070 440 ntTSL 2 BASIC16.67■□□□□ 0.26
PCDHGA12O60330 AC104135.1-201ENST00000418001 763 ntTSL 5 BASIC16.67■□□□□ 0.26
PCDHGA12O60330 BX276092.7-202ENST00000422194 696 ntTSL 3 BASIC16.67■□□□□ 0.26
PCDHGA12O60330 ST7-OT4-203ENST00000466018 894 ntTSL 5 BASIC16.67■□□□□ 0.26
PCDHGA12O60330 INGX-202ENST00000489074 768 ntBASIC16.67■□□□□ 0.26
PCDHGA12O60330 TMEM176B-206ENST00000492607 1265 ntAPPRIS P1 TSL 5 BASIC16.67■□□□□ 0.26
PCDHGA12O60330 AC093214.1-201ENST00000511688 1107 ntBASIC16.67■□□□□ 0.26
PCDHGA12O60330 LINC02055-207ENST00000524346 706 ntTSL 3 BASIC16.67■□□□□ 0.26
PCDHGA12O60330 AC091053.1-201ENST00000529883 744 ntTSL 3 BASIC16.67■□□□□ 0.26
PCDHGA12O60330 AC107918.2-201ENST00000530817 355 ntBASIC16.67■□□□□ 0.26
PCDHGA12O60330 FAM181A-205ENST00000557719 1072 ntAPPRIS P1 TSL 2 BASIC16.67■□□□□ 0.26
PCDHGA12O60330 AC243562.1-201ENST00000560672 389 ntBASIC16.67■□□□□ 0.26
PCDHGA12O60330 MIR4515-201ENST00000584082 81 ntBASIC16.67■□□□□ 0.26
PCDHGA12O60330 AC040963.1-202ENST00000589729 644 ntTSL 5 BASIC16.67■□□□□ 0.26
PCDHGA12O60330 AC016168.1-201ENST00000591422 722 ntTSL 3 BASIC16.67■□□□□ 0.26
PCDHGA12O60330 AL139327.4-201ENST00000612362 153 ntBASIC16.67■□□□□ 0.26
PCDHGA12O60330 AC244153.1-203ENST00000622796 419 ntTSL 2 BASIC16.67■□□□□ 0.26
PCDHGA12O60330 CLN3-246ENST00000636228 1224 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
PCDHGA12O60330 OPN5-206ENST00000638973 1090 ntTSL 5 BASIC16.67■□□□□ 0.26
PCDHGA12O60330 BEND4-202ENST00000504360 8692 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
PCDHGA12O60330 AL079303.2-201ENST00000555107 2613 ntTSL 3 BASIC16.67■□□□□ 0.26
PCDHGA12O60330 GGT2-202ENST00000405188 1845 ntTSL 5 BASIC16.67■□□□□ 0.26
PCDHGA12O60330 POMT1-208ENST00000423007 3320 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
PCDHGA12O60330 FBXO18-203ENST00000397269 3640 ntTSL 5 BASIC16.67■□□□□ 0.26
PCDHGA12O60330 YKT6-201ENST00000223369 2696 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
PCDHGA12O60330 FKBP10-201ENST00000321562 2662 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
PCDHGA12O60330 CASZ1-202ENST00000377022 7936 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
PCDHGA12O60330 EIF3L-202ENST00000406934 2282 ntTSL 2 BASIC16.67■□□□□ 0.26
PCDHGA12O60330 LINC00472-203ENST00000426635 2958 ntTSL 2 BASIC16.67■□□□□ 0.26
PCDHGA12O60330 ELP5-201ENST00000354429 1304 ntAPPRIS P2 TSL 5 BASIC16.67■□□□□ 0.26
PCDHGA12O60330 TFAP2E-201ENST00000373235 2189 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
PCDHGA12O60330 HPSE-207ENST00000513463 1458 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
PCDHGA12O60330 IL12RB2-202ENST00000371000 2454 ntTSL 2 BASIC16.67■□□□□ 0.26
PCDHGA12O60330 IQCE-204ENST00000404984 2086 ntAPPRIS ALT2 TSL 5 BASIC16.66■□□□□ 0.26
PCDHGA12O60330 PSMA1-209ENST00000530457 1527 ntTSL 5 BASIC16.66■□□□□ 0.26
PCDHGA12O60330 HECTD2-204ENST00000446394 4939 ntTSL 2 BASIC16.66■□□□□ 0.26
PCDHGA12O60330 IQSEC2-202ENST00000396435 6015 ntAPPRIS ALT2 TSL 1 (best) BASIC16.66■□□□□ 0.26
PCDHGA12O60330 MRPL43-201ENST00000299179 747 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
PCDHGA12O60330 RNF151-201ENST00000321392 786 ntAPPRIS ALT2 TSL 1 (best) BASIC16.66■□□□□ 0.26
PCDHGA12O60330 OSTC-201ENST00000361564 1077 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
PCDHGA12O60330 LY6G6C-201ENST00000375819 992 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
PCDHGA12O60330 KRT18P32-201ENST00000424695 1287 ntBASIC16.66■□□□□ 0.26
PCDHGA12O60330 BASP1P1-201ENST00000430708 665 ntBASIC16.66■□□□□ 0.26
PCDHGA12O60330 AC055876.3-201ENST00000431496 288 ntBASIC16.66■□□□□ 0.26
PCDHGA12O60330 AL732437.1-201ENST00000442008 595 ntTSL 4 BASIC16.66■□□□□ 0.26
PCDHGA12O60330 AL355140.1-201ENST00000457328 398 ntTSL 5 BASIC16.66■□□□□ 0.26
PCDHGA12O60330 FAM72B-205ENST00000471903 676 ntTSL 5 BASIC16.66■□□□□ 0.26
PCDHGA12O60330 AP000275.2-202ENST00000553001 929 ntTSL 5 BASIC16.66■□□□□ 0.26
PCDHGA12O60330 RARRES2P8-201ENST00000566335 367 ntBASIC16.66■□□□□ 0.26
PCDHGA12O60330 RNF151-203ENST00000569714 796 ntAPPRIS P2 TSL 1 (best) BASIC16.66■□□□□ 0.26
PCDHGA12O60330 TMEM88-202ENST00000574668 510 ntTSL 2 BASIC16.66■□□□□ 0.26
PCDHGA12O60330 ANXA8-203ENST00000583874 1860 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
PCDHGA12O60330 AC011491.2-201ENST00000599584 447 ntTSL 5 BASIC16.66■□□□□ 0.26
PCDHGA12O60330 AC138649.4-201ENST00000612222 287 ntBASIC16.66■□□□□ 0.26
PCDHGA12O60330 HNRNPM-217ENST00000620401 2458 ntAPPRIS ALT2 TSL 1 (best) BASIC16.66■□□□□ 0.26
PCDHGA12O60330 AL161645.1-201ENST00000622716 1255 ntBASIC16.66■□□□□ 0.26
PCDHGA12O60330 SPAG1-201ENST00000251809 3748 ntAPPRIS P1 TSL 5 BASIC16.66■□□□□ 0.26
PCDHGA12O60330 PLEKHG6-203ENST00000396988 2963 ntAPPRIS P1 TSL 2 BASIC16.66■□□□□ 0.26
PCDHGA12O60330 CXXC1-212ENST00000589940 2242 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
PCDHGA12O60330 LINC01554-202ENST00000436592 2052 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
PCDHGA12O60330 HOXA-AS3-205ENST00000524304 2063 ntTSL 2 BASIC16.66■□□□□ 0.26
PCDHGA12O60330 ARSA-204ENST00000395621 1918 ntAPPRIS P1 TSL 2 BASIC16.66■□□□□ 0.26
PCDHGA12O60330 MAP4K4-205ENST00000350878 7640 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
PCDHGA12O60330 HYAL3-202ENST00000359051 1635 ntTSL 5 BASIC16.66■□□□□ 0.26
PCDHGA12O60330 OLA1-201ENST00000284719 4417 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
PCDHGA12O60330 NPM2-209ENST00000521157 1484 ntAPPRIS P2 TSL 5 BASIC16.66■□□□□ 0.26
PCDHGA12O60330 TNXB-204ENST00000479795 2742 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
PCDHGA12O60330 GALNT9-201ENST00000328957 2410 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
PCDHGA12O60330 YARS2-201ENST00000324868 2122 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
PCDHGA12O60330 CFLAR-208ENST00000423241 2128 ntAPPRIS P3 TSL 1 (best) BASIC16.66■□□□□ 0.26
PCDHGA12O60330 FOXP1-210ENST00000484350 1996 ntTSL 2 BASIC16.66■□□□□ 0.26
PCDHGA12O60330 NOL4L-211ENST00000621426 6577 ntAPPRIS P2 TSL 5 BASIC16.66■□□□□ 0.26
PCDHGA12O60330 ECE2-201ENST00000324557 1823 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
PCDHGA12O60330 SLC35G6-201ENST00000412468 1697 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
PCDHGA12O60330 AC099508.1-201ENST00000499110 1666 ntTSL 4 BASIC16.65■□□□□ 0.26
PCDHGA12O60330 UVSSA-209ENST00000512728 1668 ntAPPRIS ALT2 TSL 1 (best) BASIC16.65■□□□□ 0.26
PCDHGA12O60330 SCP2-202ENST00000371513 2003 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
PCDHGA12O60330 SYNGR2-206ENST00000589711 2041 ntTSL 5 BASIC16.65■□□□□ 0.26
PCDHGA12O60330 CCDC62-201ENST00000253079 3546 ntAPPRIS P2 TSL 1 (best) BASIC16.65■□□□□ 0.26
PCDHGA12O60330 LCORL-203ENST00000382226 5009 ntAPPRIS P2 TSL 5 BASIC16.65■□□□□ 0.26
PCDHGA12O60330 BRPF1-203ENST00000424362 4712 ntAPPRIS ALT1 TSL 1 (best) BASIC16.65■□□□□ 0.26
PCDHGA12O60330 NOMO1-208ENST00000620755 3921 ntAPPRIS ALT2 TSL 1 (best) BASIC16.65■□□□□ 0.26
PCDHGA12O60330 UNC13A-206ENST00000552293 5314 ntAPPRIS ALT2 TSL 5 BASIC16.65■□□□□ 0.26
PCDHGA12O60330 RANBP3-220ENST00000591092 1783 ntAPPRIS ALT2 TSL 1 (best) BASIC16.65■□□□□ 0.26
PCDHGA12O60330 CABP5-201ENST00000293255 1257 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
PCDHGA12O60330 KLK8-202ENST00000320838 456 ntTSL 5 BASIC16.65■□□□□ 0.26
PCDHGA12O60330 VMA21-202ENST00000370361 693 ntTSL 5 BASIC16.65■□□□□ 0.26
PCDHGA12O60330 TBC1D2-202ENST00000375063 2100 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
PCDHGA12O60330 PNPO-202ENST00000434554 1196 ntTSL 2 BASIC16.65■□□□□ 0.26
PCDHGA12O60330 PNKD-204ENST00000436005 978 ntTSL 5 BASIC16.65■□□□□ 0.26
PCDHGA12O60330 AC106897.1-201ENST00000512874 394 ntTSL 2 BASIC16.65■□□□□ 0.26
PCDHGA12O60330 AL135744.1-201ENST00000565098 629 ntBASIC16.65■□□□□ 0.26
PCDHGA12O60330 AJ003147.2-201ENST00000576468 629 ntTSL 3 BASIC16.65■□□□□ 0.26
PCDHGA12O60330 DENND6B-201ENST00000413817 4939 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Retrieved 100 of 98,524 protein–RNA pairs in 54.1 ms