Protein–RNA interactions for Protein: O43734

TRAF3IP2, Adapter protein CIKS, humanhuman

Predicted RBP Predictions only

Length 574 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF3IP2O43734 LHX3-203ENST00000619587 2698 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
TRAF3IP2O43734 PCDHA14-201ENST00000506751 2298 ntBASIC14.98□□□□□ -0.01
TRAF3IP2O43734 CHGA-201ENST00000216492 2063 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
TRAF3IP2O43734 GML-201ENST00000220940 723 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
TRAF3IP2O43734 METTL26-201ENST00000301686 794 ntAPPRIS P1 TSL 2 BASIC14.98□□□□□ -0.01
TRAF3IP2O43734 METTL26-205ENST00000397666 726 ntTSL 2 BASIC14.98□□□□□ -0.01
TRAF3IP2O43734 IGLL3P-201ENST00000412472 434 ntBASIC14.98□□□□□ -0.01
TRAF3IP2O43734 AC079776.4-201ENST00000511039 504 ntBASIC14.98□□□□□ -0.01
TRAF3IP2O43734 POLD4-207ENST00000531239 584 ntTSL 2 BASIC14.98□□□□□ -0.01
TRAF3IP2O43734 AC145285.3-201ENST00000564603 959 ntBASIC14.98□□□□□ -0.01
TRAF3IP2O43734 TCAP-202ENST00000578283 583 ntTSL 5 BASIC14.98□□□□□ -0.01
TRAF3IP2O43734 LINC01197-204ENST00000611265 956 ntTSL 5 BASIC14.98□□□□□ -0.01
TRAF3IP2O43734 CLEC11A-203ENST00000617718 1128 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
TRAF3IP2O43734 HMGN3-203ENST00000620514 1010 ntTSL 3 BASIC14.98□□□□□ -0.01
TRAF3IP2O43734 IQSEC2-210ENST00000639161 936 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
TRAF3IP2O43734 AC133785.1-201ENST00000429282 2824 ntTSL 2 BASIC14.98□□□□□ -0.01
TRAF3IP2O43734 UBALD1-205ENST00000590891 2641 ntBASIC14.98□□□□□ -0.01
TRAF3IP2O43734 CYB5R3-204ENST00000407332 1849 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
TRAF3IP2O43734 CDIP1-207ENST00000564828 1636 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
TRAF3IP2O43734 MAST3-201ENST00000262811 5896 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
TRAF3IP2O43734 AC006538.1-201ENST00000567905 1585 ntBASIC14.98□□□□□ -0.01
TRAF3IP2O43734 AC119396.1-201ENST00000576789 1558 ntAPPRIS P1 TSL 5 BASIC14.98□□□□□ -0.01
TRAF3IP2O43734 TBRG4-202ENST00000361278 1917 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
TRAF3IP2O43734 YPEL3-203ENST00000562641 1941 ntTSL 3 BASIC14.98□□□□□ -0.01
TRAF3IP2O43734 PNO1-201ENST00000263657 2286 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
TRAF3IP2O43734 SENP1-204ENST00000549518 2260 ntAPPRIS P2 TSL 1 (best) BASIC14.97□□□□□ -0.01
TRAF3IP2O43734 NUP50-203ENST00000407019 2059 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
TRAF3IP2O43734 EDC3-202ENST00000426797 2093 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
TRAF3IP2O43734 EWSR1-222ENST00000629659 2446 ntTSL 5 BASIC14.97□□□□□ -0.01
TRAF3IP2O43734 DOK4-201ENST00000340099 2772 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
TRAF3IP2O43734 ZFYVE19-203ENST00000355341 2775 ntAPPRIS P3 TSL 1 (best) BASIC14.97□□□□□ -0.01
TRAF3IP2O43734 ASH1L-207ENST00000548830 1862 ntTSL 5 BASIC14.97□□□□□ -0.01
TRAF3IP2O43734 PPP3CA-201ENST00000323055 4519 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
TRAF3IP2O43734 FAM3D-201ENST00000358781 1319 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
TRAF3IP2O43734 SLC12A5-201ENST00000243964 6061 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
TRAF3IP2O43734 PIGT-207ENST00000543458 2037 ntTSL 2 BASIC14.97□□□□□ -0.01
TRAF3IP2O43734 ZBTB5-201ENST00000307750 4627 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
TRAF3IP2O43734 TSC2-204ENST00000401874 5421 ntAPPRIS ALT2 TSL 1 (best) BASIC14.97□□□□□ -0.01
TRAF3IP2O43734 ASTN2-202ENST00000313400 4747 ntAPPRIS ALT2 TSL 5 BASIC14.97□□□□□ -0.01
TRAF3IP2O43734 NFATC4-202ENST00000413692 5700 ntAPPRIS ALT2 TSL 1 (best) BASIC14.97□□□□□ -0.01
TRAF3IP2O43734 ART5-201ENST00000359918 1241 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
TRAF3IP2O43734 HCG4-201ENST00000418983 998 ntBASIC14.97□□□□□ -0.01
TRAF3IP2O43734 FTCD-AS1-201ENST00000446649 500 ntTSL 2 BASIC14.97□□□□□ -0.01
TRAF3IP2O43734 HCG4B-203ENST00000450128 991 ntBASIC14.97□□□□□ -0.01
TRAF3IP2O43734 CXCL1P1-201ENST00000502804 216 ntBASIC14.97□□□□□ -0.01
TRAF3IP2O43734 AC103957.2-201ENST00000521218 510 ntTSL 2 BASIC14.97□□□□□ -0.01
TRAF3IP2O43734 LDLRAD2-203ENST00000543870 1180 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
TRAF3IP2O43734 AC092115.3-201ENST00000575838 592 ntTSL 5 BASIC14.97□□□□□ -0.01
TRAF3IP2O43734 CYP2A7P1-201ENST00000595391 815 ntBASIC14.97□□□□□ -0.01
TRAF3IP2O43734 SIGLEC29P-201ENST00000599873 1114 ntBASIC14.97□□□□□ -0.01
TRAF3IP2O43734 C1QL3-202ENST00000619991 783 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
TRAF3IP2O43734 ZNF133-205ENST00000401790 2642 ntAPPRIS ALT2 TSL 2 BASIC14.97□□□□□ -0.01
TRAF3IP2O43734 ZNF133-206ENST00000402618 2622 ntTSL 2 BASIC14.97□□□□□ -0.01
TRAF3IP2O43734 MTERF2-201ENST00000240050 1790 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
TRAF3IP2O43734 ADAMTS13-206ENST00000371929 4934 ntAPPRIS P4 TSL 1 (best) BASIC14.97□□□□□ -0.01
TRAF3IP2O43734 DCAF12L2-201ENST00000360028 2599 ntAPPRIS P1 BASIC14.97□□□□□ -0.01
TRAF3IP2O43734 THTPA-203ENST00000554789 1595 ntTSL 2 BASIC14.97□□□□□ -0.01
TRAF3IP2O43734 DYNC1I1-212ENST00000630942 2249 ntTSL 2 BASIC14.97□□□□□ -0.01
TRAF3IP2O43734 IQCE-217ENST00000623361 6775 ntAPPRIS ALT2 TSL 1 (best) BASIC14.97□□□□□ -0.01
TRAF3IP2O43734 NUP50-202ENST00000396096 1895 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
TRAF3IP2O43734 NFATC2-205ENST00000609507 2662 ntAPPRIS ALT2 TSL 1 (best) BASIC14.97□□□□□ -0.01
TRAF3IP2O43734 HMGN1-204ENST00000380749 1383 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
TRAF3IP2O43734 AC093627.6-201ENST00000478759 1365 ntTSL 5 BASIC14.97□□□□□ -0.01
TRAF3IP2O43734 COQ6-220ENST00000629426 1538 ntTSL 5 BASIC14.97□□□□□ -0.01
TRAF3IP2O43734 KPNA2-202ENST00000537025 2456 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
TRAF3IP2O43734 PRR15-201ENST00000319694 1678 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
TRAF3IP2O43734 RAD1-208ENST00000628399 1678 ntTSL 3 BASIC14.97□□□□□ -0.01
TRAF3IP2O43734 TMEM161A-201ENST00000162044 1820 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
TRAF3IP2O43734 CFAP45-201ENST00000368099 1842 ntAPPRIS P2 TSL 1 (best) BASIC14.96□□□□□ -0.01
TRAF3IP2O43734 SLC22A11-203ENST00000377585 2124 ntTSL 2 BASIC14.96□□□□□ -0.01
TRAF3IP2O43734 IL9RP2-201ENST00000423948 1312 ntBASIC14.96□□□□□ -0.01
TRAF3IP2O43734 RGS3-206ENST00000374136 2092 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
TRAF3IP2O43734 AL139300.1-201ENST00000472726 2505 ntAPPRIS P1 TSL 2 BASIC14.96□□□□□ -0.01
TRAF3IP2O43734 TSC22D1-AS1-201ENST00000616360 2845 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
TRAF3IP2O43734 DAB2IP-205ENST00000408936 6784 ntAPPRIS ALT2 TSL 5 BASIC14.96□□□□□ -0.01
TRAF3IP2O43734 MRNIP-201ENST00000292586 1238 ntAPPRIS P4 TSL 1 (best) BASIC14.96□□□□□ -0.01
TRAF3IP2O43734 STK32C-204ENST00000368622 2010 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
TRAF3IP2O43734 FNDC11-202ENST00000370098 1112 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
TRAF3IP2O43734 LINC01503-203ENST00000436710 901 ntTSL 3 BASIC14.96□□□□□ -0.01
TRAF3IP2O43734 MIR503HG-203ENST00000441492 649 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
TRAF3IP2O43734 RNASET2-206ENST00000476238 887 ntAPPRIS P1 TSL 5 BASIC14.96□□□□□ -0.01
TRAF3IP2O43734 AC073957.2-201ENST00000549241 1562 ntTSL 4 BASIC14.96□□□□□ -0.01
TRAF3IP2O43734 AC087641.1-201ENST00000557561 1021 ntBASIC14.96□□□□□ -0.01
TRAF3IP2O43734 OVCA2-201ENST00000572195 1122 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
TRAF3IP2O43734 AC084125.4-201ENST00000580385 338 ntTSL 3 BASIC14.96□□□□□ -0.01
TRAF3IP2O43734 FAM71E1-202ENST00000595790 1225 ntAPPRIS P3 TSL 1 (best) BASIC14.96□□□□□ -0.01
TRAF3IP2O43734 AL512343.2-201ENST00000609423 490 ntTSL 2 BASIC14.96□□□□□ -0.01
TRAF3IP2O43734 ZNF445-205ENST00000617032 1291 ntTSL 5 BASIC14.96□□□□□ -0.01
TRAF3IP2O43734 CDK2AP1-207ENST00000618072 1144 ntTSL 3 BASIC14.96□□□□□ -0.01
TRAF3IP2O43734 URAHP-203ENST00000517889 1381 ntTSL 1 (best) BASIC14.96□□□□□ -0.02
TRAF3IP2O43734 ACOT12-201ENST00000307624 2086 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.02
TRAF3IP2O43734 NPR3-203ENST00000415167 1753 ntAPPRIS P3 TSL 1 (best) BASIC14.96□□□□□ -0.02
TRAF3IP2O43734 RBPJL-201ENST00000343694 2489 ntAPPRIS P3 TSL 1 (best) BASIC14.95□□□□□ -0.02
TRAF3IP2O43734 COL18A1-203ENST00000359759 6586 ntAPPRIS ALT2 TSL 5 BASIC14.95□□□□□ -0.02
TRAF3IP2O43734 HLA-F-216ENST00000259951 1635 ntAPPRIS P4 BASIC14.95□□□□□ -0.02
TRAF3IP2O43734 CLN3-203ENST00000357806 1469 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
TRAF3IP2O43734 ACTN4-201ENST00000252699 4963 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
TRAF3IP2O43734 MFF-201ENST00000304593 2004 ntAPPRIS P1 TSL 2 BASIC14.95□□□□□ -0.02
TRAF3IP2O43734 WLS-202ENST00000354777 2037 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
TRAF3IP2O43734 LAT2-201ENST00000275635 1869 ntAPPRIS P2 TSL 1 (best) BASIC14.95□□□□□ -0.02
Retrieved 100 of 98,524 protein–RNA pairs in 38.8 ms