Protein–RNA interactions for Protein: O15353

FOXN1, Forkhead box protein N1, humanhuman

Predictions only

Length 648 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXN1O15353 USB1-203ENST00000539737 1212 ntTSL 2 BASIC20■□□□□ 0.79
FOXN1O15353 ARMC7-205ENST00000584947 445 ntTSL 3 BASIC20■□□□□ 0.79
FOXN1O15353 FAM92A-219ENST00000620645 1014 ntAPPRIS ALT2 TSL 5 BASIC20■□□□□ 0.79
FOXN1O15353 PFAS-212ENST00000625942 396 ntTSL 5 BASIC20■□□□□ 0.79
FOXN1O15353 SYNE2-228ENST00000639659 1290 ntTSL 1 (best) BASIC20■□□□□ 0.79
FOXN1O15353 AXIN1-201ENST00000262320 3643 ntAPPRIS P4 TSL 1 (best) BASIC20■□□□□ 0.79
FOXN1O15353 CXXC1P1-201ENST00000483225 1897 ntTSL 2 BASIC20■□□□□ 0.79
FOXN1O15353 FUT8-AS1-201ENST00000621019 1521 ntBASIC20■□□□□ 0.79
FOXN1O15353 HNRNPM-217ENST00000620401 2458 ntAPPRIS ALT2 TSL 1 (best) BASIC20■□□□□ 0.79
FOXN1O15353 CCDC112-205ENST00000506442 2145 ntAPPRIS ALT2 TSL 2 BASIC20■□□□□ 0.79
FOXN1O15353 RABL6-203ENST00000371663 3078 ntAPPRIS ALT2 TSL 1 (best) BASIC20■□□□□ 0.79
FOXN1O15353 TNXB-204ENST00000479795 2742 ntTSL 1 (best) BASIC20■□□□□ 0.79
FOXN1O15353 PLSCR4-204ENST00000446574 1442 ntAPPRIS P1 TSL 2 BASIC20■□□□□ 0.79
FOXN1O15353 ACBD3-201ENST00000366812 3573 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
FOXN1O15353 MAPRE1-201ENST00000375571 2623 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
FOXN1O15353 SARDH-202ENST00000371867 1326 ntTSL 1 (best) BASIC20■□□□□ 0.79
FOXN1O15353 ZNF211-201ENST00000240731 2440 ntAPPRIS P4 TSL 2 BASIC20■□□□□ 0.79
FOXN1O15353 UBXN2A-201ENST00000309033 6066 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
FOXN1O15353 PDE4A-201ENST00000293683 2583 ntAPPRIS ALT2 TSL 1 (best) BASIC19.99■□□□□ 0.79
FOXN1O15353 ZNRF3-203ENST00000544604 6851 ntAPPRIS ALT2 TSL 1 (best) BASIC19.99■□□□□ 0.79
FOXN1O15353 AGPAT3-201ENST00000291572 5546 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
FOXN1O15353 CLCN2-205ENST00000457512 2820 ntAPPRIS ALT2 TSL 2 BASIC19.99■□□□□ 0.79
FOXN1O15353 MOB3A-201ENST00000357066 3391 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
FOXN1O15353 SOX11-201ENST00000322002 8719 ntAPPRIS P1 BASIC19.99■□□□□ 0.79
FOXN1O15353 RTL8B-201ENST00000391440 2026 ntAPPRIS P1 BASIC19.99■□□□□ 0.79
FOXN1O15353 HNF1B-201ENST00000613727 1546 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
FOXN1O15353 SZT2-202ENST00000372450 1191 ntAPPRIS ALT2 TSL 1 (best) BASIC19.99■□□□□ 0.79
FOXN1O15353 NUDT1-206ENST00000397049 714 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
FOXN1O15353 AL359815.1-201ENST00000457706 821 ntTSL 2 BASIC19.99■□□□□ 0.79
FOXN1O15353 TPI1-206ENST00000488464 791 ntTSL 5 BASIC19.99■□□□□ 0.79
FOXN1O15353 AC119751.2-201ENST00000504529 210 ntBASIC19.99■□□□□ 0.79
FOXN1O15353 AC087276.3-201ENST00000526220 787 ntTSL 3 BASIC19.99■□□□□ 0.79
FOXN1O15353 IFITM2-204ENST00000533141 588 ntAPPRIS ALT2 TSL 4 BASIC19.99■□□□□ 0.79
FOXN1O15353 IL32-234ENST00000552936 713 ntAPPRIS ALT2 TSL 3 BASIC19.99■□□□□ 0.79
FOXN1O15353 AC025259.3-201ENST00000564531 542 ntTSL 3 BASIC19.99■□□□□ 0.79
FOXN1O15353 AL031717.1-201ENST00000569670 565 ntTSL 4 BASIC19.99■□□□□ 0.79
FOXN1O15353 COQ4-205ENST00000609948 956 ntTSL 2 BASIC19.99■□□□□ 0.79
FOXN1O15353 RNF157-201ENST00000269391 4955 ntAPPRIS P3 TSL 1 (best) BASIC19.99■□□□□ 0.79
FOXN1O15353 NF2-208ENST00000403435 2568 ntTSL 5 BASIC19.99■□□□□ 0.79
FOXN1O15353 RTKN2-203ENST00000395260 2076 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
FOXN1O15353 MAPK9-207ENST00000452135 4815 ntAPPRIS P5 TSL 5 BASIC19.99■□□□□ 0.79
FOXN1O15353 LMBR1L-204ENST00000547382 2235 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
FOXN1O15353 TFAP2A-AS1-201ENST00000420777 1575 ntTSL 5 BASIC19.99■□□□□ 0.79
FOXN1O15353 DTX2-206ENST00000430490 2623 ntAPPRIS P3 TSL 1 (best) BASIC19.99■□□□□ 0.79
FOXN1O15353 C5orf30-201ENST00000319933 3049 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
FOXN1O15353 COBLL1-201ENST00000342193 4898 ntAPPRIS P3 TSL 1 (best) BASIC19.99■□□□□ 0.79
FOXN1O15353 OSTF1-201ENST00000346234 1319 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
FOXN1O15353 AZIN1-201ENST00000337198 4721 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
FOXN1O15353 AL023806.1-201ENST00000603994 1649 ntBASIC19.98■□□□□ 0.79
FOXN1O15353 GGT5-201ENST00000263112 2334 ntAPPRIS ALT2 TSL 1 (best) BASIC19.98■□□□□ 0.79
FOXN1O15353 OSBP2-202ENST00000401475 2468 ntTSL 2 BASIC19.98■□□□□ 0.79
FOXN1O15353 B9D1-209ENST00000477478 1353 ntTSL 3 BASIC19.98■□□□□ 0.79
FOXN1O15353 TBXAS1-210ENST00000458722 2057 ntTSL 2 BASIC19.98■□□□□ 0.79
FOXN1O15353 CYB561D2-202ENST00000418577 1533 ntAPPRIS P1 TSL 2 BASIC19.98■□□□□ 0.79
FOXN1O15353 LTA-214ENST00000454783 1507 ntAPPRIS P1 TSL 2 BASIC19.98■□□□□ 0.79
FOXN1O15353 RBCK1-202ENST00000356286 2774 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
FOXN1O15353 LRPPRC-203ENST00000409946 1848 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
FOXN1O15353 NGFR-202ENST00000504201 1840 ntTSL 2 BASIC19.98■□□□□ 0.79
FOXN1O15353 DNM2-201ENST00000355667 3541 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
FOXN1O15353 MAPK15-202ENST00000395107 834 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
FOXN1O15353 AP006294.1-201ENST00000415407 339 ntBASIC19.98■□□□□ 0.79
FOXN1O15353 C1orf226-202ENST00000426197 1049 ntAPPRIS P3 TSL 2 BASIC19.98■□□□□ 0.79
FOXN1O15353 AL353779.1-201ENST00000434793 351 ntBASIC19.98■□□□□ 0.79
FOXN1O15353 RNF216P1-213ENST00000494947 946 ntTSL 2 BASIC19.98■□□□□ 0.79
FOXN1O15353 AC005833.2-201ENST00000527518 1249 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
FOXN1O15353 AL139349.1-201ENST00000530479 577 ntTSL 4 BASIC19.98■□□□□ 0.79
FOXN1O15353 AC015688.8-201ENST00000577746 656 ntTSL 4 BASIC19.98■□□□□ 0.79
FOXN1O15353 LINC01759-203ENST00000635271 888 ntTSL 5 BASIC19.98■□□□□ 0.79
FOXN1O15353 POLR2J4-203ENST00000326391 1422 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
FOXN1O15353 LINC00887-203ENST00000429578 1717 ntTSL 2 BASIC19.98■□□□□ 0.79
FOXN1O15353 SLC22A5-203ENST00000435065 1746 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
FOXN1O15353 AGBL5-202ENST00000360131 3177 ntAPPRIS P3 TSL 1 (best) BASIC19.98■□□□□ 0.79
FOXN1O15353 ACY3-201ENST00000255082 1300 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
FOXN1O15353 GLYCTK-207ENST00000477382 1304 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
FOXN1O15353 SLC12A9-202ENST00000415287 1912 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
FOXN1O15353 ATOH1-201ENST00000306011 2212 ntAPPRIS P1 BASIC19.98■□□□□ 0.79
FOXN1O15353 ZSCAN10-207ENST00000575108 2247 ntTSL 2 BASIC19.98■□□□□ 0.79
FOXN1O15353 SEPHS1-202ENST00000378614 2387 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
FOXN1O15353 ZNF623-201ENST00000458270 2733 ntAPPRIS ALT2 TSL 1 (best) BASIC19.97■□□□□ 0.79
FOXN1O15353 TSNARE1-204ENST00000519651 2110 ntAPPRIS ALT2 TSL 1 (best) BASIC19.97■□□□□ 0.79
FOXN1O15353 SELENOF-208ENST00000616787 1835 ntAPPRIS ALT1 TSL 5 BASIC19.97■□□□□ 0.79
FOXN1O15353 UBE2N-201ENST00000318066 5186 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
FOXN1O15353 NR1H3-202ENST00000405576 1352 ntTSL 5 BASIC19.97■□□□□ 0.79
FOXN1O15353 FNBP1-203ENST00000443566 5227 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
FOXN1O15353 TLE2-217ENST00000590536 2344 ntAPPRIS ALT2 TSL 1 (best) BASIC19.97■□□□□ 0.79
FOXN1O15353 TMEM175-201ENST00000264771 1860 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
FOXN1O15353 AL138688.1-201ENST00000624851 1594 ntBASIC19.97■□□□□ 0.79
FOXN1O15353 MPV17-208ENST00000405076 603 ntTSL 5 BASIC19.97■□□□□ 0.79
FOXN1O15353 AL450998.2-201ENST00000418525 639 ntTSL 3 BASIC19.97■□□□□ 0.79
FOXN1O15353 COPS6-202ENST00000418625 1107 ntAPPRIS ALT2 TSL 5 BASIC19.97■□□□□ 0.79
FOXN1O15353 LINC00982-205ENST00000420957 435 ntBASIC19.97■□□□□ 0.79
FOXN1O15353 LEPROTL1-202ENST00000442880 908 ntTSL 2 BASIC19.97■□□□□ 0.79
FOXN1O15353 RPS3A-212ENST00000514682 985 ntTSL 5 BASIC19.97■□□□□ 0.79
FOXN1O15353 AP002008.1-201ENST00000530283 1155 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
FOXN1O15353 IGHV3OR16-16-201ENST00000563644 343 ntBASIC19.97■□□□□ 0.79
FOXN1O15353 MIR4453-201ENST00000584019 89 ntBASIC19.97■□□□□ 0.79
FOXN1O15353 ELOF1-206ENST00000590700 585 ntAPPRIS P1 TSL 3 BASIC19.97■□□□□ 0.79
FOXN1O15353 SLC9A3-AS1-206ENST00000607005 435 ntTSL 3 BASIC19.97■□□□□ 0.79
FOXN1O15353 LINC00466-208ENST00000635218 1217 ntTSL 5 BASIC19.97■□□□□ 0.79
FOXN1O15353 RIOX2-201ENST00000333396 5347 ntAPPRIS ALT1 TSL 1 (best) BASIC19.97■□□□□ 0.79
Retrieved 100 of 98,524 protein–RNA pairs in 23.3 ms