Protein–RNA interactions for Protein: D6REC4

CFAP99, Cilia- and flagella-associated protein 99, humanhuman

Predictions only

Length 459 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CFAP99D6REC4 AC010654.1-201ENST00000615722 808 ntBASIC16.81■□□□□ 0.28
CFAP99D6REC4 BX640515.1-201ENST00000617215 977 ntBASIC16.81■□□□□ 0.28
CFAP99D6REC4 CLEC11A-203ENST00000617718 1128 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
CFAP99D6REC4 MIOS-202ENST00000405785 3095 ntAPPRIS P1 TSL 5 BASIC16.81■□□□□ 0.28
CFAP99D6REC4 LMNA-202ENST00000361308 1713 ntTSL 5 BASIC16.81■□□□□ 0.28
CFAP99D6REC4 GHR-201ENST00000230882 4560 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
CFAP99D6REC4 EPN2-203ENST00000395618 2216 ntTSL 2 BASIC16.81■□□□□ 0.28
CFAP99D6REC4 HNRNPF-204ENST00000443950 2755 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
CFAP99D6REC4 FAM178B-204ENST00000490605 2710 ntAPPRIS ALT2 TSL 5 BASIC16.81■□□□□ 0.28
CFAP99D6REC4 FBXO7-201ENST00000266087 2195 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
CFAP99D6REC4 ARHGEF4-206ENST00000428230 2172 ntTSL 5 BASIC16.81■□□□□ 0.28
CFAP99D6REC4 AFG3L2-201ENST00000269143 3247 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
CFAP99D6REC4 LINC00336-201ENST00000477984 2107 ntTSL 2 BASIC16.81■□□□□ 0.28
CFAP99D6REC4 CTIF-201ENST00000256413 5750 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
CFAP99D6REC4 ALDH3A2-225ENST00000630662 1558 ntTSL 5 BASIC16.81■□□□□ 0.28
CFAP99D6REC4 POU4F2-201ENST00000281321 3144 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
CFAP99D6REC4 RNF31-201ENST00000324103 3627 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
CFAP99D6REC4 DHX30-205ENST00000445061 4065 ntAPPRIS P2 TSL 1 (best) BASIC16.81■□□□□ 0.28
CFAP99D6REC4 KCNC1-202ENST00000379472 7965 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
CFAP99D6REC4 KLK3-201ENST00000326003 1463 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
CFAP99D6REC4 KRT8P49-201ENST00000604166 1432 ntBASIC16.8■□□□□ 0.28
CFAP99D6REC4 BRD3-201ENST00000303407 5652 ntAPPRIS P2 TSL 1 (best) BASIC16.8■□□□□ 0.28
CFAP99D6REC4 DUS3L-202ENST00000320699 1355 ntAPPRIS ALT2 TSL 1 (best) BASIC16.8■□□□□ 0.28
CFAP99D6REC4 FGFBP1-201ENST00000382333 1359 ntAPPRIS P1 TSL 3 BASIC16.8■□□□□ 0.28
CFAP99D6REC4 AC002310.6-201ENST00000624451 1377 ntBASIC16.8■□□□□ 0.28
CFAP99D6REC4 RUNX1-203ENST00000358356 2720 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
CFAP99D6REC4 TSKU-205ENST00000612930 2666 ntAPPRIS P1 TSL 4 BASIC16.8■□□□□ 0.28
CFAP99D6REC4 IL9RP2-201ENST00000423948 1312 ntBASIC16.8■□□□□ 0.28
CFAP99D6REC4 PRMT1-202ENST00000454376 1327 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
CFAP99D6REC4 AC129492.6-201ENST00000611383 1305 ntBASIC16.8■□□□□ 0.28
CFAP99D6REC4 ART5-201ENST00000359918 1241 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
CFAP99D6REC4 RFXANK-203ENST00000407360 1212 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
CFAP99D6REC4 NPY-203ENST00000407573 705 ntAPPRIS P1 TSL 3 BASIC16.8■□□□□ 0.28
CFAP99D6REC4 ARPC4-203ENST00000433034 926 ntTSL 3 BASIC16.8■□□□□ 0.28
CFAP99D6REC4 CD99L2-206ENST00000466436 988 ntAPPRIS P4 TSL 1 (best) BASIC16.8■□□□□ 0.28
CFAP99D6REC4 C1QB-203ENST00000509305 1254 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
CFAP99D6REC4 RCHY1-208ENST00000512706 1011 ntTSL 3 BASIC16.8■□□□□ 0.28
CFAP99D6REC4 SEC23A-206ENST00000553970 574 ntTSL 4 BASIC16.8■□□□□ 0.28
CFAP99D6REC4 AC084125.4-201ENST00000580385 338 ntTSL 3 BASIC16.8■□□□□ 0.28
CFAP99D6REC4 BABAM1-206ENST00000595632 966 ntAPPRIS ALT2 TSL 5 BASIC16.8■□□□□ 0.28
CFAP99D6REC4 CRB3-204ENST00000600229 1078 ntAPPRIS ALT2 TSL 2 BASIC16.8■□□□□ 0.28
CFAP99D6REC4 ZEB1-AS1-209ENST00000607455 559 ntTSL 4 BASIC16.8■□□□□ 0.28
CFAP99D6REC4 CHMP4A-211ENST00000609024 735 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
CFAP99D6REC4 AC004790.2-201ENST00000623588 572 ntBASIC16.8■□□□□ 0.28
CFAP99D6REC4 IQSEC2-210ENST00000639161 936 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
CFAP99D6REC4 KCTD14-201ENST00000353172 1691 ntAPPRIS P3 TSL 1 (best) BASIC16.8■□□□□ 0.28
CFAP99D6REC4 SFRP1-201ENST00000220772 4492 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
CFAP99D6REC4 CHST10-201ENST00000264249 2842 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
CFAP99D6REC4 TPPP-201ENST00000360578 6022 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
CFAP99D6REC4 ZBTB46-201ENST00000245663 5185 ntAPPRIS P1 TSL 5 BASIC16.8■□□□□ 0.28
CFAP99D6REC4 CARD11-203ENST00000396946 4366 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
CFAP99D6REC4 NRG1-216ENST00000523079 2359 ntTSL 2 BASIC16.8■□□□□ 0.28
CFAP99D6REC4 MAP2K5-201ENST00000178640 2347 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
CFAP99D6REC4 ADAM10-205ENST00000461408 1932 ntTSL 2 BASIC16.8■□□□□ 0.28
CFAP99D6REC4 KIAA1217-206ENST00000376462 6123 ntAPPRIS ALT2 TSL 1 (best) BASIC16.8■□□□□ 0.28
CFAP99D6REC4 HS6ST2-204ENST00000521489 2607 ntTSL 5 BASIC16.8■□□□□ 0.28
CFAP99D6REC4 RASIP1-201ENST00000222145 3308 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
CFAP99D6REC4 NECAB2-203ENST00000565691 2064 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
CFAP99D6REC4 TOP3BP1-201ENST00000420768 1380 ntBASIC16.79■□□□□ 0.28
CFAP99D6REC4 MYC-202ENST00000377970 2351 ntAPPRIS ALT2 TSL 1 (best) BASIC16.79■□□□□ 0.28
CFAP99D6REC4 C5orf30-201ENST00000319933 3049 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
CFAP99D6REC4 C2orf50-201ENST00000381585 2684 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
CFAP99D6REC4 MAGED4-211ENST00000599522 2669 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
CFAP99D6REC4 TRIM7-204ENST00000393319 2320 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
CFAP99D6REC4 KNOP1-205ENST00000568230 1311 ntAPPRIS ALT2 TSL 5 BASIC16.79■□□□□ 0.28
CFAP99D6REC4 CTPS2-201ENST00000359276 3629 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
CFAP99D6REC4 NFATC4-215ENST00000554661 2631 ntAPPRIS ALT2 TSL 1 (best) BASIC16.79■□□□□ 0.28
CFAP99D6REC4 TTLL10-202ENST00000379289 2259 ntAPPRIS P1 TSL 2 BASIC16.79■□□□□ 0.28
CFAP99D6REC4 CCDC71L-202ENST00000523505 4232 ntAPPRIS P2 BASIC16.79■□□□□ 0.28
CFAP99D6REC4 RDH13-223ENST00000610356 1931 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
CFAP99D6REC4 PEX10-201ENST00000288774 2871 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
CFAP99D6REC4 MRNIP-201ENST00000292586 1238 ntAPPRIS P4 TSL 1 (best) BASIC16.79■□□□□ 0.28
CFAP99D6REC4 YIF1B-203ENST00000339413 1225 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
CFAP99D6REC4 EIF6-202ENST00000374443 1017 ntTSL 5 BASIC16.79■□□□□ 0.28
CFAP99D6REC4 BX276092.7-202ENST00000422194 696 ntTSL 3 BASIC16.79■□□□□ 0.28
CFAP99D6REC4 LINC01237-203ENST00000430555 843 ntTSL 4 BASIC16.79■□□□□ 0.28
CFAP99D6REC4 AC009947.1-201ENST00000444350 727 ntBASIC16.79■□□□□ 0.28
CFAP99D6REC4 AC034213.1-201ENST00000507681 806 ntTSL 3 BASIC16.79■□□□□ 0.28
CFAP99D6REC4 CIPC-205ENST00000555437 566 ntTSL 3 BASIC16.79■□□□□ 0.28
CFAP99D6REC4 HEXA-210ENST00000567213 1000 ntTSL 3 BASIC16.79■□□□□ 0.28
CFAP99D6REC4 AC104758.1-202ENST00000568184 602 ntTSL 3 BASIC16.79■□□□□ 0.28
CFAP99D6REC4 AC008992.1-201ENST00000591132 446 ntTSL 2 BASIC16.79■□□□□ 0.28
CFAP99D6REC4 NUTM2B-AS1-211ENST00000601369 1233 ntTSL 2 BASIC16.79■□□□□ 0.28
CFAP99D6REC4 SLC9A3-AS1-204ENST00000606288 791 ntTSL 2 BASIC16.79■□□□□ 0.28
CFAP99D6REC4 AC120114.3-201ENST00000611923 658 ntBASIC16.79■□□□□ 0.28
CFAP99D6REC4 AC012366.1-201ENST00000615411 473 ntTSL 5 BASIC16.79■□□□□ 0.28
CFAP99D6REC4 ADCYAP1R1-203ENST00000409363 1889 ntAPPRIS ALT2 TSL 1 (best) BASIC16.79■□□□□ 0.28
CFAP99D6REC4 SFTPB-202ENST00000409383 1867 ntAPPRIS P2 TSL 1 (best) BASIC16.79■□□□□ 0.28
CFAP99D6REC4 APBA2-207ENST00000558402 4031 ntAPPRIS P1 TSL 5 BASIC16.79■□□□□ 0.28
CFAP99D6REC4 PCDH8P1-201ENST00000428983 2773 ntBASIC16.79■□□□□ 0.28
CFAP99D6REC4 AIDA-201ENST00000340020 3008 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
CFAP99D6REC4 SLC22A3-201ENST00000275300 3348 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
CFAP99D6REC4 MLLT10-203ENST00000377072 5126 ntAPPRIS P3 TSL 1 (best) BASIC16.79■□□□□ 0.28
CFAP99D6REC4 NFIX-209ENST00000587760 1487 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
CFAP99D6REC4 MEI1-215ENST00000540833 2326 ntTSL 5 BASIC16.79■□□□□ 0.28
CFAP99D6REC4 TNKS1BP1-201ENST00000358252 5795 ntAPPRIS P2 TSL 1 (best) BASIC16.79■□□□□ 0.28
CFAP99D6REC4 AL132857.2-201ENST00000634305 1737 ntTSL 5 BASIC16.79■□□□□ 0.28
CFAP99D6REC4 ITGB2-AS1-202ENST00000441379 2282 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
CFAP99D6REC4 ARHGAP44-202ENST00000340825 4211 ntAPPRIS ALT2 TSL 1 (best) BASIC16.78■□□□□ 0.28
CFAP99D6REC4 ARHGAP44-203ENST00000379672 4228 ntAPPRIS P3 TSL 1 (best) BASIC16.78■□□□□ 0.28
Retrieved 100 of 98,524 protein–RNA pairs in 61.3 ms