Protein–RNA interactions for Protein: C9JVI0

USP17L11, Ubiquitin carboxyl-terminal hydrolase 17-like protein 11, humanhuman

Predictions only

Length 530 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP17L11C9JVI0 TEX30-202ENST00000376021 1038 ntTSL 2 BASIC19.4■□□□□ 0.7
USP17L11C9JVI0 SNCA-205ENST00000394991 1290 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
USP17L11C9JVI0 AC016735.2-201ENST00000438736 569 ntTSL 4 BASIC19.4■□□□□ 0.7
USP17L11C9JVI0 STARD13-205ENST00000439831 945 ntTSL 2 BASIC19.4■□□□□ 0.7
USP17L11C9JVI0 FXYD1-202ENST00000455515 594 ntAPPRIS P1 TSL 2 BASIC19.4■□□□□ 0.7
USP17L11C9JVI0 RAB7A-204ENST00000483906 533 ntTSL 3 BASIC19.4■□□□□ 0.7
USP17L11C9JVI0 AC015712.4-202ENST00000558641 1007 ntTSL 4 BASIC19.4■□□□□ 0.7
USP17L11C9JVI0 MIR4492-201ENST00000581627 80 ntBASIC19.4■□□□□ 0.7
USP17L11C9JVI0 AC021097.1-201ENST00000607902 574 ntBASIC19.4■□□□□ 0.7
USP17L11C9JVI0 AC254562.3-201ENST00000626627 631 ntTSL 5 BASIC19.4■□□□□ 0.7
USP17L11C9JVI0 FNBP1-202ENST00000420781 5410 ntAPPRIS ALT1 TSL 1 (best) BASIC19.4■□□□□ 0.7
USP17L11C9JVI0 FOXRED2-203ENST00000397223 2184 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
USP17L11C9JVI0 LETM1P2-201ENST00000597330 2178 ntBASIC19.4■□□□□ 0.7
USP17L11C9JVI0 DHX33-202ENST00000433302 2225 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
USP17L11C9JVI0 TRPM2-202ENST00000300482 5989 ntAPPRIS P3 TSL 1 (best) BASIC19.4■□□□□ 0.7
USP17L11C9JVI0 SLC25A35-205ENST00000580340 1541 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
USP17L11C9JVI0 NFIC-210ENST00000590282 1558 ntTSL 2 BASIC19.4■□□□□ 0.7
USP17L11C9JVI0 STRN4-201ENST00000263280 3210 ntAPPRIS P3 TSL 1 (best) BASIC19.4■□□□□ 0.7
USP17L11C9JVI0 FOXD4L1-201ENST00000306507 2491 ntAPPRIS P1 BASIC19.4■□□□□ 0.7
USP17L11C9JVI0 IQSEC2-218ENST00000640694 5958 ntAPPRIS ALT2 TSL 5 BASIC19.39■□□□□ 0.7
USP17L11C9JVI0 RANBP3-201ENST00000034275 1762 ntAPPRIS ALT2 TSL 1 (best) BASIC19.39■□□□□ 0.7
USP17L11C9JVI0 NFE2-202ENST00000435572 1762 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.7
USP17L11C9JVI0 PTGER3-208ENST00000370932 1841 ntAPPRIS ALT2 TSL 5 BASIC19.39■□□□□ 0.7
USP17L11C9JVI0 CLEC18B-206ENST00000620745 1847 ntTSL 5 BASIC19.39■□□□□ 0.7
USP17L11C9JVI0 PDCD7-201ENST00000204549 2851 ntAPPRIS P2 TSL 1 (best) BASIC19.39■□□□□ 0.7
USP17L11C9JVI0 PLEKHF2-201ENST00000315367 2881 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.7
USP17L11C9JVI0 FTSJ1-201ENST00000019019 1986 ntAPPRIS ALT1 TSL 2 BASIC19.39■□□□□ 0.7
USP17L11C9JVI0 ABTB1-201ENST00000232744 1965 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.7
USP17L11C9JVI0 SEMA6B-201ENST00000586582 3986 ntAPPRIS P2 TSL 1 (best) BASIC19.39■□□□□ 0.7
USP17L11C9JVI0 SLC9A3P2-201ENST00000447821 2021 ntBASIC19.39■□□□□ 0.69
USP17L11C9JVI0 RNF121-203ENST00000393713 2132 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
USP17L11C9JVI0 FBXO7-201ENST00000266087 2195 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
USP17L11C9JVI0 NOX4-215ENST00000534731 2156 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
USP17L11C9JVI0 KCTD2-201ENST00000322444 3635 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
USP17L11C9JVI0 MRPL16-201ENST00000300151 1182 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
USP17L11C9JVI0 MIR661-201ENST00000384842 89 ntBASIC19.39■□□□□ 0.69
USP17L11C9JVI0 AC124057.1-201ENST00000433035 404 ntTSL 5 BASIC19.39■□□□□ 0.69
USP17L11C9JVI0 AL512638.1-201ENST00000457493 794 ntBASIC19.39■□□□□ 0.69
USP17L11C9JVI0 POLD4-211ENST00000539074 714 ntTSL 3 BASIC19.39■□□□□ 0.69
USP17L11C9JVI0 IFT20-209ENST00000579419 787 ntAPPRIS ALT1 TSL 3 BASIC19.39■□□□□ 0.69
USP17L11C9JVI0 MIR4453-201ENST00000584019 89 ntBASIC19.39■□□□□ 0.69
USP17L11C9JVI0 ZNF667-AS1-202ENST00000586091 678 ntTSL 2 BASIC19.39■□□□□ 0.69
USP17L11C9JVI0 TIMM13-202ENST00000591871 631 ntTSL 5 BASIC19.39■□□□□ 0.69
USP17L11C9JVI0 MZF1-202ENST00000594108 1110 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
USP17L11C9JVI0 RTKN-203ENST00000305557 2646 ntAPPRIS P3 TSL 5 BASIC19.39■□□□□ 0.69
USP17L11C9JVI0 AC010186.2-201ENST00000575094 2612 ntTSL 2 BASIC19.39■□□□□ 0.69
USP17L11C9JVI0 EVX2-201ENST00000308618 4203 ntAPPRIS P1 TSL 5 BASIC19.39■□□□□ 0.69
USP17L11C9JVI0 FHAD1-205ENST00000375997 1459 ntTSL 3 BASIC19.39■□□□□ 0.69
USP17L11C9JVI0 AVPR1A-201ENST00000299178 5963 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
USP17L11C9JVI0 AC006974.1-201ENST00000637928 1501 ntTSL 5 BASIC19.39■□□□□ 0.69
USP17L11C9JVI0 THTPA-203ENST00000554789 1595 ntTSL 2 BASIC19.39■□□□□ 0.69
USP17L11C9JVI0 ALMS1P1-202ENST00000450720 1601 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
USP17L11C9JVI0 NARF-206ENST00000457415 1668 ntTSL 5 BASIC19.39■□□□□ 0.69
USP17L11C9JVI0 CALD1-204ENST00000417172 1915 ntTSL 5 BASIC19.39■□□□□ 0.69
USP17L11C9JVI0 RASL11B-201ENST00000248706 1995 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
USP17L11C9JVI0 AP1S2-201ENST00000329235 2237 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
USP17L11C9JVI0 LMBR1L-204ENST00000547382 2235 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
USP17L11C9JVI0 AC004890.2-201ENST00000426347 2419 ntTSL 5 BASIC19.39■□□□□ 0.69
USP17L11C9JVI0 DTX2-202ENST00000413936 2472 ntAPPRIS P3 TSL 1 (best) BASIC19.39■□□□□ 0.69
USP17L11C9JVI0 WT1-201ENST00000332351 3122 ntAPPRIS ALT2 TSL 1 (best) BASIC19.38■□□□□ 0.69
USP17L11C9JVI0 AL355987.4-201ENST00000415992 4244 ntTSL 2 BASIC19.38■□□□□ 0.69
USP17L11C9JVI0 SBNO2-204ENST00000587024 4861 ntAPPRIS ALT2 TSL 2 BASIC19.38■□□□□ 0.69
USP17L11C9JVI0 TMEM255B-202ENST00000375353 6100 ntAPPRIS P2 TSL 1 (best) BASIC19.38■□□□□ 0.69
USP17L11C9JVI0 ENC1-201ENST00000302351 5520 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
USP17L11C9JVI0 C1orf43-203ENST00000368516 872 ntTSL 2 BASIC19.38■□□□□ 0.69
USP17L11C9JVI0 AFF2-204ENST00000370458 1488 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
USP17L11C9JVI0 FAM131A-203ENST00000383847 1483 ntAPPRIS P1 TSL 2 BASIC19.38■□□□□ 0.69
USP17L11C9JVI0 GUK1-210ENST00000391865 990 ntAPPRIS ALT1 TSL 1 (best) BASIC19.38■□□□□ 0.69
USP17L11C9JVI0 AC015922.1-201ENST00000421102 1152 ntBASIC19.38■□□□□ 0.69
USP17L11C9JVI0 AL158071.2-201ENST00000423380 815 ntTSL 3 BASIC19.38■□□□□ 0.69
USP17L11C9JVI0 FAM207CP-201ENST00000443486 507 ntBASIC19.38■□□□□ 0.69
USP17L11C9JVI0 TIA1-206ENST00000445587 1440 ntTSL 5 BASIC19.38■□□□□ 0.69
USP17L11C9JVI0 AP001471.1-201ENST00000454245 672 ntTSL 3 BASIC19.38■□□□□ 0.69
USP17L11C9JVI0 AC092691.1-201ENST00000484092 554 ntTSL 4 BASIC19.38■□□□□ 0.69
USP17L11C9JVI0 LINC02242-201ENST00000507298 641 ntTSL 5 BASIC19.38■□□□□ 0.69
USP17L11C9JVI0 TNIP1-211ENST00000521591 2274 ntAPPRIS P3 TSL 1 (best) BASIC19.38■□□□□ 0.69
USP17L11C9JVI0 NRG1-216ENST00000523079 2359 ntTSL 2 BASIC19.38■□□□□ 0.69
USP17L11C9JVI0 DPF2-205ENST00000528416 2799 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
USP17L11C9JVI0 AL133467.1-201ENST00000554161 993 ntTSL 2 BASIC19.38■□□□□ 0.69
USP17L11C9JVI0 MARVELD3-204ENST00000565261 1351 ntAPPRIS ALT2 TSL 1 (best) BASIC19.38■□□□□ 0.69
USP17L11C9JVI0 DNM1P34-201ENST00000567292 2276 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
USP17L11C9JVI0 KF456478.1-201ENST00000585980 472 ntTSL 3 BASIC19.38■□□□□ 0.69
USP17L11C9JVI0 DMRTC2-204ENST00000596827 1675 ntTSL 2 BASIC19.38■□□□□ 0.69
USP17L11C9JVI0 ACY1-212ENST00000635797 1294 ntTSL 5 BASIC19.38■□□□□ 0.69
USP17L11C9JVI0 ATP6AP2-225ENST00000637482 1648 ntAPPRIS ALT2 TSL 5 BASIC19.38■□□□□ 0.69
USP17L11C9JVI0 AF228730.6-201ENST00000641497 218 ntBASIC19.38■□□□□ 0.69
USP17L11C9JVI0 AC084121.3-201ENST00000641716 218 ntBASIC19.38■□□□□ 0.69
USP17L11C9JVI0 AC105233.6-201ENST00000642093 218 ntBASIC19.38■□□□□ 0.69
USP17L11C9JVI0 FAM210A-201ENST00000322247 4340 ntAPPRIS P1 TSL 2 BASIC19.38■□□□□ 0.69
USP17L11C9JVI0 NOMO3-201ENST00000263012 3911 ntAPPRIS ALT2 TSL 1 (best) BASIC19.38■□□□□ 0.69
USP17L11C9JVI0 SEPT11-201ENST00000264893 5593 ntAPPRIS P2 TSL 1 (best) BASIC19.38■□□□□ 0.69
USP17L11C9JVI0 PLCH2-203ENST00000378486 4837 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
USP17L11C9JVI0 PLCH2-204ENST00000419816 4837 ntAPPRIS P1 TSL 5 BASIC19.37■□□□□ 0.69
USP17L11C9JVI0 IGSF8-201ENST00000314485 2343 ntAPPRIS P2 TSL 1 (best) BASIC19.37■□□□□ 0.69
USP17L11C9JVI0 AC060834.1-201ENST00000443027 2032 ntBASIC19.37■□□□□ 0.69
USP17L11C9JVI0 CTSB-232ENST00000534510 1989 ntAPPRIS P1 TSL 5 BASIC19.37■□□□□ 0.69
USP17L11C9JVI0 CHRNA7-207ENST00000635884 1975 ntTSL 5 BASIC19.37■□□□□ 0.69
USP17L11C9JVI0 BHMT2-205ENST00000521567 1537 ntTSL 2 BASIC19.37■□□□□ 0.69
USP17L11C9JVI0 SH2D3C-205ENST00000420366 2682 ntTSL 2 BASIC19.37■□□□□ 0.69
USP17L11C9JVI0 RPL21-203ENST00000319826 806 ntAPPRIS P1 TSL 2 BASIC19.37■□□□□ 0.69
Retrieved 100 of 98,524 protein–RNA pairs in 29.9 ms