Protein–RNA interactions for Protein: A6NNA2

SRRM3, Serine/arginine repetitive matrix protein 3, humanhuman

Predicted RBP Predictions only

Length 597 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SRRM3A6NNA2 CCDC8-201ENST00000307522 3213 ntAPPRIS P1 BASIC17.45■□□□□ 0.38
SRRM3A6NNA2 KDM5C-204ENST00000375401 6031 ntAPPRIS P3 TSL 1 (best) BASIC17.45■□□□□ 0.38
SRRM3A6NNA2 SLC1A4-201ENST00000234256 4561 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
SRRM3A6NNA2 SYTL2-215ENST00000527523 3049 ntTSL 2 BASIC17.45■□□□□ 0.38
SRRM3A6NNA2 LINC00311-201ENST00000366314 1566 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
SRRM3A6NNA2 C9orf43-202ENST00000374165 2049 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
SRRM3A6NNA2 SERPINB6-207ENST00000612421 1570 ntTSL 2 BASIC17.45■□□□□ 0.38
SRRM3A6NNA2 LRFN2-201ENST00000338305 3270 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
SRRM3A6NNA2 ASNS-201ENST00000175506 2356 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
SRRM3A6NNA2 SAP130-202ENST00000259235 4065 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
SRRM3A6NNA2 CEP72-201ENST00000264935 2434 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
SRRM3A6NNA2 ATXN2-219ENST00000550104 4648 ntAPPRIS P3 TSL 1 (best) BASIC17.45■□□□□ 0.38
SRRM3A6NNA2 TMEM147-201ENST00000222284 899 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
SRRM3A6NNA2 TNNT1-201ENST00000291901 967 ntAPPRIS ALT2 TSL 1 (best) BASIC17.45■□□□□ 0.38
SRRM3A6NNA2 BOLA1-202ENST00000369152 859 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
SRRM3A6NNA2 ID3-201ENST00000374561 1251 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
SRRM3A6NNA2 AC097376.2-204ENST00000609359 627 ntTSL 2 BASIC17.45■□□□□ 0.38
SRRM3A6NNA2 AC244153.1-202ENST00000617855 482 ntTSL 3 BASIC17.45■□□□□ 0.38
SRRM3A6NNA2 HSFX1-201ENST00000370416 1963 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
SRRM3A6NNA2 FUT7-201ENST00000314412 2584 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
SRRM3A6NNA2 CLEC18B-201ENST00000339953 1865 ntAPPRIS P2 TSL 1 (best) BASIC17.45■□□□□ 0.38
SRRM3A6NNA2 CLEC18C-202ENST00000536907 1865 ntAPPRIS ALT2 TSL 5 BASIC17.45■□□□□ 0.38
SRRM3A6NNA2 GAS7-210ENST00000579158 1528 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
SRRM3A6NNA2 SYNE3-203ENST00000554873 2826 ntTSL 5 BASIC17.45■□□□□ 0.38
SRRM3A6NNA2 GGT6-204ENST00000574154 2482 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
SRRM3A6NNA2 WDR45-205ENST00000376358 1432 ntTSL 2 BASIC17.45■□□□□ 0.38
SRRM3A6NNA2 PAUPAR-201ENST00000630360 2965 ntBASIC17.45■□□□□ 0.38
SRRM3A6NNA2 SCP2-202ENST00000371513 2003 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
SRRM3A6NNA2 ASXL1-212ENST00000620121 5374 ntAPPRIS ALT2 TSL 5 BASIC17.45■□□□□ 0.38
SRRM3A6NNA2 NRXN1-229ENST00000628515 3243 ntTSL 5 BASIC17.45■□□□□ 0.38
SRRM3A6NNA2 SMARCC2-202ENST00000347471 3839 ntAPPRIS ALT2 TSL 1 (best) BASIC17.45■□□□□ 0.38
SRRM3A6NNA2 WDR90-209ENST00000547944 1672 ntTSL 2 BASIC17.45■□□□□ 0.38
SRRM3A6NNA2 SHQ1-201ENST00000325599 2879 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
SRRM3A6NNA2 RMND5B-201ENST00000313386 1929 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
SRRM3A6NNA2 MTA1-203ENST00000406191 2770 ntAPPRIS P5 TSL 2 BASIC17.45■□□□□ 0.38
SRRM3A6NNA2 CAMK2B-203ENST00000347193 1577 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
SRRM3A6NNA2 AC006538.1-201ENST00000567905 1585 ntBASIC17.45■□□□□ 0.38
SRRM3A6NNA2 KDM4B-201ENST00000159111 5593 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
SRRM3A6NNA2 CRY1-201ENST00000008527 3267 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
SRRM3A6NNA2 MXD4-201ENST00000337190 4056 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
SRRM3A6NNA2 EPS8L2-201ENST00000318562 3148 ntAPPRIS P2 TSL 1 (best) BASIC17.44■□□□□ 0.38
SRRM3A6NNA2 FAM104A-201ENST00000403627 2798 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
SRRM3A6NNA2 ADGRB2-201ENST00000373655 5400 ntAPPRIS P4 TSL 1 (best) BASIC17.44■□□□□ 0.38
SRRM3A6NNA2 PROSER1-201ENST00000352251 5168 ntAPPRIS P2 TSL 1 (best) BASIC17.44■□□□□ 0.38
SRRM3A6NNA2 SLC46A2-201ENST00000374228 2502 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
SRRM3A6NNA2 PLTP-205ENST00000477313 2255 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
SRRM3A6NNA2 PHF20L1-209ENST00000395386 6237 ntAPPRIS P1 TSL 5 BASIC17.44■□□□□ 0.38
SRRM3A6NNA2 JRK-203ENST00000571961 2687 ntAPPRIS ALT2 TSL 1 (best) BASIC17.44■□□□□ 0.38
SRRM3A6NNA2 PCDHA7-202ENST00000525929 5221 ntAPPRIS P2 TSL 1 (best) BASIC17.44■□□□□ 0.38
SRRM3A6NNA2 MRGPRF-202ENST00000320913 705 ntTSL 2 BASIC17.44■□□□□ 0.38
SRRM3A6NNA2 DPM3-203ENST00000368400 409 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
SRRM3A6NNA2 AC025183.1-201ENST00000506335 425 ntTSL 4 BASIC17.44■□□□□ 0.38
SRRM3A6NNA2 TSPAN4-214ENST00000525201 834 ntTSL 5 BASIC17.44■□□□□ 0.38
SRRM3A6NNA2 AL109827.1-203ENST00000541176 872 ntAPPRIS P5 TSL 2 BASIC17.44■□□□□ 0.38
SRRM3A6NNA2 FAM57A-205ENST00000572018 373 ntTSL 3 BASIC17.44■□□□□ 0.38
SRRM3A6NNA2 BNIP3P18-201ENST00000593976 575 ntBASIC17.44■□□□□ 0.38
SRRM3A6NNA2 Z94160.2-201ENST00000609322 910 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
SRRM3A6NNA2 ADAMTS16-201ENST00000274181 4979 ntAPPRIS P1 TSL 2 BASIC17.44■□□□□ 0.38
SRRM3A6NNA2 TSPAN7-202ENST00000378482 1909 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
SRRM3A6NNA2 CPEB3-203ENST00000614585 5789 ntAPPRIS P3 TSL 5 BASIC17.44■□□□□ 0.38
SRRM3A6NNA2 CEACAM16-202ENST00000587331 1692 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
SRRM3A6NNA2 SMN1-204ENST00000506163 1445 ntAPPRIS ALT2 TSL 1 (best) BASIC17.44■□□□□ 0.38
SRRM3A6NNA2 TLDC2-201ENST00000217320 2083 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
SRRM3A6NNA2 TNFRSF10A-201ENST00000221132 2714 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
SRRM3A6NNA2 ADD1-201ENST00000264758 4045 ntAPPRIS P3 TSL 5 BASIC17.44■□□□□ 0.38
SRRM3A6NNA2 HSD3B7-201ENST00000262520 2200 ntTSL 2 BASIC17.44■□□□□ 0.38
SRRM3A6NNA2 TCP11L2-201ENST00000299045 2219 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
SRRM3A6NNA2 THNSL2-203ENST00000377254 1560 ntTSL 2 BASIC17.44■□□□□ 0.38
SRRM3A6NNA2 C1RL-210ENST00000544702 1569 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
SRRM3A6NNA2 ZFAND6-211ENST00000559157 1559 ntTSL 2 BASIC17.44■□□□□ 0.38
SRRM3A6NNA2 ABHD15-201ENST00000307201 3592 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
SRRM3A6NNA2 JPH2-202ENST00000372980 4787 ntAPPRIS P1 TSL 5 BASIC17.44■□□□□ 0.38
SRRM3A6NNA2 AC009041.2-206ENST00000563863 1728 ntTSL 2 BASIC17.44■□□□□ 0.38
SRRM3A6NNA2 AC022532.1-201ENST00000624563 1728 ntBASIC17.44■□□□□ 0.38
SRRM3A6NNA2 SEPT8-204ENST00000378699 2289 ntTSL 5 BASIC17.44■□□□□ 0.38
SRRM3A6NNA2 AL136309.2-201ENST00000427049 2277 ntTSL 2 BASIC17.44■□□□□ 0.38
SRRM3A6NNA2 BTN3A1-204ENST00000425234 1882 ntTSL 2 BASIC17.44■□□□□ 0.38
SRRM3A6NNA2 RBM47-212ENST00000514014 2419 ntTSL 2 BASIC17.43■□□□□ 0.38
SRRM3A6NNA2 FAM210A-201ENST00000322247 4340 ntAPPRIS P1 TSL 2 BASIC17.43■□□□□ 0.38
SRRM3A6NNA2 EPB41L4A-AS1-201ENST00000413221 2969 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
SRRM3A6NNA2 AKR1B15-202ENST00000457545 1621 ntAPPRIS P1 TSL 5 BASIC17.43■□□□□ 0.38
SRRM3A6NNA2 MYCBPAP-203ENST00000436259 3102 ntAPPRIS ALT2 TSL 5 BASIC17.43■□□□□ 0.38
SRRM3A6NNA2 PHKA1-201ENST00000339490 6121 ntAPPRIS ALT1 TSL 1 (best) BASIC17.43■□□□□ 0.38
SRRM3A6NNA2 CSK-202ENST00000439220 1900 ntAPPRIS P1 TSL 2 BASIC17.43■□□□□ 0.38
SRRM3A6NNA2 CDIP1-209ENST00000567695 2062 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
SRRM3A6NNA2 TMEM82-201ENST00000375782 1520 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
SRRM3A6NNA2 IQGAP2-201ENST00000274364 5844 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
SRRM3A6NNA2 AC006058.4-201ENST00000624016 1670 ntBASIC17.43■□□□□ 0.38
SRRM3A6NNA2 ZNF7-201ENST00000325217 592 ntTSL 4 BASIC17.43■□□□□ 0.38
SRRM3A6NNA2 TMEM128-202ENST00000382753 1221 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
SRRM3A6NNA2 MIR770-201ENST00000390219 98 ntBASIC17.43■□□□□ 0.38
SRRM3A6NNA2 DDT-203ENST00000403754 569 ntTSL 3 BASIC17.43■□□□□ 0.38
SRRM3A6NNA2 IQCF3-204ENST00000446775 1241 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
SRRM3A6NNA2 FGFR3P6-201ENST00000457012 610 ntBASIC17.43■□□□□ 0.38
SRRM3A6NNA2 AC063976.1-201ENST00000457890 381 ntTSL 2 BASIC17.43■□□□□ 0.38
SRRM3A6NNA2 MLF1-210ENST00000484955 1247 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
SRRM3A6NNA2 AC008825.1-201ENST00000504398 452 ntTSL 3 BASIC17.43■□□□□ 0.38
SRRM3A6NNA2 LINC02387-201ENST00000541749 868 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
SRRM3A6NNA2 HOPX-214ENST00000556614 1138 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
SRRM3A6NNA2 AC011840.4-201ENST00000578471 627 ntBASIC17.43■□□□□ 0.38
Retrieved 100 of 98,524 protein–RNA pairs in 44.5 ms