Protein–RNA interactions for Protein: A0A5B6

TCRBV3S1, T-cell receptor beta variable 28 (Fragment), humanhuman

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TCRBV3S1A0A5B6 PORCN-205ENST00000367574 1368 ntAPPRIS ALT1 TSL 1 (best) BASIC15.75■□□□□ 0.11
TCRBV3S1A0A5B6 PORCN-214ENST00000537758 1371 ntAPPRIS ALT1 TSL 1 (best) BASIC15.75■□□□□ 0.11
TCRBV3S1A0A5B6 CSF3-206ENST00000577675 1360 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
TCRBV3S1A0A5B6 LINC01568-207ENST00000641790 1380 ntBASIC15.75■□□□□ 0.11
TCRBV3S1A0A5B6 CHSY3-201ENST00000305031 3850 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
TCRBV3S1A0A5B6 FBXL12-208ENST00000589626 1920 ntTSL 2 BASIC15.74■□□□□ 0.11
TCRBV3S1A0A5B6 CHAD-201ENST00000258969 1739 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
TCRBV3S1A0A5B6 TFAP2D-201ENST00000008391 1711 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
TCRBV3S1A0A5B6 CD1D-201ENST00000368171 2253 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
TCRBV3S1A0A5B6 UBC-206ENST00000538617 1303 ntTSL 5 BASIC15.74■□□□□ 0.11
TCRBV3S1A0A5B6 AL031731.1-201ENST00000642131 2094 ntBASIC15.74■□□□□ 0.11
TCRBV3S1A0A5B6 GARS-201ENST00000389266 2634 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
TCRBV3S1A0A5B6 DUS2-202ENST00000432752 1864 ntTSL 2 BASIC15.74■□□□□ 0.11
TCRBV3S1A0A5B6 REXO1L8P-201ENST00000604378 1897 ntBASIC15.74■□□□□ 0.11
TCRBV3S1A0A5B6 CYP4F11-203ENST00000402119 3161 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
TCRBV3S1A0A5B6 TACC1-202ENST00000317827 7802 ntAPPRIS P3 TSL 1 (best) BASIC15.74■□□□□ 0.11
TCRBV3S1A0A5B6 AC016027.1-202ENST00000607927 1699 ntBASIC15.74■□□□□ 0.11
TCRBV3S1A0A5B6 MYLK2-202ENST00000375994 2956 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
TCRBV3S1A0A5B6 KIF18B-203ENST00000590129 2569 ntAPPRIS ALT2 TSL 1 (best) BASIC15.74■□□□□ 0.11
TCRBV3S1A0A5B6 IL15RA-208ENST00000397251 1046 ntAPPRIS ALT2 TSL 1 (best) BASIC15.74■□□□□ 0.11
TCRBV3S1A0A5B6 NKTR-203ENST00000442970 646 ntTSL 2 BASIC15.74■□□□□ 0.11
TCRBV3S1A0A5B6 LBX1-AS1-203ENST00000454527 740 ntTSL 5 BASIC15.74■□□□□ 0.11
TCRBV3S1A0A5B6 LBX1-AS1-204ENST00000456391 421 ntTSL 5 BASIC15.74■□□□□ 0.11
TCRBV3S1A0A5B6 SNORA78-201ENST00000459373 127 ntBASIC15.74■□□□□ 0.11
TCRBV3S1A0A5B6 SNX5-210ENST00000481323 562 ntTSL 3 BASIC15.74■□□□□ 0.11
TCRBV3S1A0A5B6 COX11P1-201ENST00000489116 835 ntBASIC15.74■□□□□ 0.11
TCRBV3S1A0A5B6 AC116353.4-201ENST00000507279 576 ntTSL 4 BASIC15.74■□□□□ 0.11
TCRBV3S1A0A5B6 GUSBP12-201ENST00000513727 720 ntBASIC15.74■□□□□ 0.11
TCRBV3S1A0A5B6 AP003396.3-201ENST00000530918 778 ntTSL 5 BASIC15.74■□□□□ 0.11
TCRBV3S1A0A5B6 SLC39A8-202ENST00000394833 3238 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
TCRBV3S1A0A5B6 PCGF1-201ENST00000233630 1792 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
TCRBV3S1A0A5B6 ASIC1-201ENST00000228468 4072 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
TCRBV3S1A0A5B6 EPS8L2-218ENST00000530636 2469 ntAPPRIS P2 TSL 1 (best) BASIC15.74■□□□□ 0.11
TCRBV3S1A0A5B6 SMARCD2-202ENST00000323347 1935 ntTSL 2 BASIC15.74■□□□□ 0.11
TCRBV3S1A0A5B6 NFIC-210ENST00000590282 1558 ntTSL 2 BASIC15.74■□□□□ 0.11
TCRBV3S1A0A5B6 CFLAR-204ENST00000341582 2056 ntAPPRIS ALT2 TSL 1 (best) BASIC15.74■□□□□ 0.11
TCRBV3S1A0A5B6 AC023157.3-201ENST00000619086 2088 ntBASIC15.74■□□□□ 0.11
TCRBV3S1A0A5B6 NR4A2-203ENST00000409108 1735 ntTSL 5 BASIC15.74■□□□□ 0.11
TCRBV3S1A0A5B6 AC069224.1-201ENST00000566372 1715 ntBASIC15.74■□□□□ 0.11
TCRBV3S1A0A5B6 ARHGEF28-214ENST00000545377 6351 ntAPPRIS P3 TSL 5 BASIC15.74■□□□□ 0.11
TCRBV3S1A0A5B6 SH3GLB2-202ENST00000372559 1365 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
TCRBV3S1A0A5B6 TAS1R1-201ENST00000333172 2892 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
TCRBV3S1A0A5B6 SLC29A1-202ENST00000371713 2168 ntAPPRIS P1 TSL 5 BASIC15.73■□□□□ 0.11
TCRBV3S1A0A5B6 APBA2-205ENST00000558330 3349 ntTSL 2 BASIC15.73■□□□□ 0.11
TCRBV3S1A0A5B6 RBM14-201ENST00000310137 2828 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
TCRBV3S1A0A5B6 RTBDN-201ENST00000322912 1328 ntAPPRIS P3 TSL 1 (best) BASIC15.73■□□□□ 0.11
TCRBV3S1A0A5B6 AC096667.1-201ENST00000640078 3465 ntTSL 5 BASIC15.73■□□□□ 0.11
TCRBV3S1A0A5B6 CLSTN1-201ENST00000361311 4647 ntAPPRIS P3 TSL 1 (best) BASIC15.73■□□□□ 0.11
TCRBV3S1A0A5B6 STARD4-203ENST00000502322 1467 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
TCRBV3S1A0A5B6 TUBB6-211ENST00000591208 1492 ntTSL 5 BASIC15.73■□□□□ 0.11
TCRBV3S1A0A5B6 CYB561D1-205ENST00000430195 5077 ntTSL 2 BASIC15.73■□□□□ 0.11
TCRBV3S1A0A5B6 SMURF2-201ENST00000262435 2918 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
TCRBV3S1A0A5B6 CXCL14-202ENST00000512158 1760 ntAPPRIS ALT2 TSL 1 (best) BASIC15.73■□□□□ 0.11
TCRBV3S1A0A5B6 TPBG-202ENST00000535040 3392 ntAPPRIS P1 TSL 2 BASIC15.73■□□□□ 0.11
TCRBV3S1A0A5B6 NOTO-201ENST00000398468 2749 ntAPPRIS P1 TSL 2 BASIC15.73■□□□□ 0.11
TCRBV3S1A0A5B6 POM121C-206ENST00000607367 3690 ntAPPRIS ALT2 TSL 5 BASIC15.73■□□□□ 0.11
TCRBV3S1A0A5B6 ANKMY1-207ENST00000403283 2874 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
TCRBV3S1A0A5B6 BAALC-201ENST00000297574 801 ntTSL 3 BASIC15.73■□□□□ 0.11
TCRBV3S1A0A5B6 KCNK7-202ENST00000342202 1283 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
TCRBV3S1A0A5B6 TMEM53-201ENST00000372235 890 ntTSL 2 BASIC15.73■□□□□ 0.11
TCRBV3S1A0A5B6 SCO2-202ENST00000395693 992 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
TCRBV3S1A0A5B6 AL391650.1-205ENST00000433939 579 ntAPPRIS P1 TSL 3 BASIC15.73■□□□□ 0.11
TCRBV3S1A0A5B6 LY6E-214ENST00000522971 857 ntAPPRIS P2 TSL 2 BASIC15.73■□□□□ 0.11
TCRBV3S1A0A5B6 VENTXP5-201ENST00000523979 775 ntBASIC15.73■□□□□ 0.11
TCRBV3S1A0A5B6 FAU-207ENST00000529639 847 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
TCRBV3S1A0A5B6 UQCR11-201ENST00000585671 753 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
TCRBV3S1A0A5B6 UBA52-210ENST00000598780 668 ntAPPRIS P1 TSL 3 BASIC15.73■□□□□ 0.11
TCRBV3S1A0A5B6 AL807752.6-202ENST00000622933 765 ntAPPRIS P5 TSL 3 BASIC15.73■□□□□ 0.11
TCRBV3S1A0A5B6 LTBP4-205ENST00000396819 4764 ntAPPRIS ALT2 TSL 1 (best) BASIC15.73■□□□□ 0.11
TCRBV3S1A0A5B6 AP000253.1-201ENST00000449339 2233 ntTSL 3 BASIC15.73■□□□□ 0.11
TCRBV3S1A0A5B6 ACOX3-202ENST00000413009 2374 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
TCRBV3S1A0A5B6 BCAT2-209ENST00000599246 1449 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
TCRBV3S1A0A5B6 LINC01136-203ENST00000457348 2539 ntTSL 2 BASIC15.73■□□□□ 0.11
TCRBV3S1A0A5B6 ZDHHC24-201ENST00000310442 4721 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
TCRBV3S1A0A5B6 HS2ST1-202ENST00000370551 1585 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
TCRBV3S1A0A5B6 GRAMD4-203ENST00000408031 2834 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
TCRBV3S1A0A5B6 TSNARE1-205ENST00000520166 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC15.73■□□□□ 0.11
TCRBV3S1A0A5B6 GPR108-202ENST00000430424 2009 ntAPPRIS ALT2 TSL 5 BASIC15.73■□□□□ 0.11
TCRBV3S1A0A5B6 MBD1-210ENST00000457839 2473 ntAPPRIS ALT2 TSL 2 BASIC15.73■□□□□ 0.11
TCRBV3S1A0A5B6 FAM184B-201ENST00000265018 6622 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
TCRBV3S1A0A5B6 RBFOX3-211ENST00000583458 2934 ntAPPRIS ALT2 TSL 5 BASIC15.73■□□□□ 0.11
TCRBV3S1A0A5B6 ITGA3-202ENST00000320031 4888 ntAPPRIS P2 TSL 1 (best) BASIC15.73■□□□□ 0.11
TCRBV3S1A0A5B6 IGF2-204ENST00000381406 5179 ntAPPRIS ALT1 TSL 2 BASIC15.73■□□□□ 0.11
TCRBV3S1A0A5B6 LCK-206ENST00000373564 2137 ntTSL 5 BASIC15.73■□□□□ 0.11
TCRBV3S1A0A5B6 XXYLT1-205ENST00000437101 2149 ntTSL 2 BASIC15.73■□□□□ 0.11
TCRBV3S1A0A5B6 ANKRD23-201ENST00000318357 2597 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
TCRBV3S1A0A5B6 ITGB7-201ENST00000267082 2867 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
TCRBV3S1A0A5B6 EPS8-201ENST00000281172 4061 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
TCRBV3S1A0A5B6 SLC9A2-201ENST00000233969 5410 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
TCRBV3S1A0A5B6 NFATC2-206ENST00000609943 5690 ntAPPRIS ALT2 TSL 1 (best) BASIC15.72■□□□□ 0.11
TCRBV3S1A0A5B6 RAB40B-206ENST00000571995 3859 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
TCRBV3S1A0A5B6 KCNQ2-204ENST00000359125 3253 ntAPPRIS P4 TSL 1 (best) BASIC15.72■□□□□ 0.11
TCRBV3S1A0A5B6 USP4-201ENST00000265560 3126 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
TCRBV3S1A0A5B6 UBA5-213ENST00000494238 2997 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
TCRBV3S1A0A5B6 ASCC3-207ENST00000522650 2828 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
TCRBV3S1A0A5B6 HNF1A-211ENST00000543427 2819 ntTSL 5 BASIC15.72■□□□□ 0.11
TCRBV3S1A0A5B6 TLE3-202ENST00000440567 2657 ntTSL 2 BASIC15.72■□□□□ 0.11
TCRBV3S1A0A5B6 BRF1-205ENST00000440513 2368 ntTSL 2 BASIC15.72■□□□□ 0.11
TCRBV3S1A0A5B6 BAIAP2-219ENST00000575245 2229 ntTSL 5 BASIC15.72■□□□□ 0.11
TCRBV3S1A0A5B6 EIF4G1-204ENST00000352767 5484 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
Retrieved 100 of 98,524 protein–RNA pairs in 25.1 ms