Protein–RNA interactions for Protein: Q9Y6N3

CLCA3P, Calcium-activated chloride channel regulator family member 3, humanhuman

Predictions only

Length 262 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLCA3PQ9Y6N3 RHBDF1P1-201ENST00000427504 1941 ntBASIC15.95■□□□□ 0.14
CLCA3PQ9Y6N3 B4GALT4-216ENST00000483209 2494 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
CLCA3PQ9Y6N3 RPRD1A-209ENST00000590898 1945 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
CLCA3PQ9Y6N3 CBX8-201ENST00000269385 3791 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
CLCA3PQ9Y6N3 ZIC5-201ENST00000267294 4639 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
CLCA3PQ9Y6N3 LMBR1L-204ENST00000547382 2235 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
CLCA3PQ9Y6N3 AC008969.1-201ENST00000550135 6438 ntTSL 2 BASIC15.95■□□□□ 0.14
CLCA3PQ9Y6N3 FMO5-208ENST00000578284 1784 ntTSL 5 BASIC15.95■□□□□ 0.14
CLCA3PQ9Y6N3 SLC10A3-204ENST00000393587 1862 ntAPPRIS P3 TSL 2 BASIC15.95■□□□□ 0.14
CLCA3PQ9Y6N3 HIP1R-201ENST00000253083 4539 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
CLCA3PQ9Y6N3 TMEM229B-201ENST00000357461 4068 ntAPPRIS P1 TSL 2 BASIC15.94■□□□□ 0.14
CLCA3PQ9Y6N3 SNAPC4-201ENST00000298532 5010 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
CLCA3PQ9Y6N3 SPIDR-227ENST00000541342 3311 ntAPPRIS ALT2 TSL 2 BASIC15.94■□□□□ 0.14
CLCA3PQ9Y6N3 CLDN7-201ENST00000360325 1542 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
CLCA3PQ9Y6N3 AL109955.1-201ENST00000417346 1540 ntTSL 2 BASIC15.94■□□□□ 0.14
CLCA3PQ9Y6N3 TSKU-205ENST00000612930 2666 ntAPPRIS P1 TSL 4 BASIC15.94■□□□□ 0.14
CLCA3PQ9Y6N3 PIAS3-201ENST00000369298 2761 ntTSL 5 BASIC15.94■□□□□ 0.14
CLCA3PQ9Y6N3 ZNF628-201ENST00000391718 3177 ntAPPRIS ALT2 BASIC15.94■□□□□ 0.14
CLCA3PQ9Y6N3 B4GALNT2-201ENST00000300404 1906 ntAPPRIS P3 TSL 1 (best) BASIC15.94■□□□□ 0.14
CLCA3PQ9Y6N3 PODXL-201ENST00000322985 2011 ntAPPRIS ALT2 TSL 1 (best) BASIC15.94■□□□□ 0.14
CLCA3PQ9Y6N3 DAGLB-202ENST00000425398 2044 ntTSL 2 BASIC15.94■□□□□ 0.14
CLCA3PQ9Y6N3 LINC00336-201ENST00000477984 2107 ntTSL 2 BASIC15.94■□□□□ 0.14
CLCA3PQ9Y6N3 DYNC1I1-212ENST00000630942 2249 ntTSL 2 BASIC15.94■□□□□ 0.14
CLCA3PQ9Y6N3 ADAM11-203ENST00000535346 2529 ntTSL 2 BASIC15.94■□□□□ 0.14
CLCA3PQ9Y6N3 ABCG5-201ENST00000260645 2740 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
CLCA3PQ9Y6N3 YIF1B-203ENST00000339413 1225 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
CLCA3PQ9Y6N3 PIGU-202ENST00000374820 1248 ntAPPRIS ALT2 TSL 1 (best) BASIC15.94■□□□□ 0.14
CLCA3PQ9Y6N3 IGHV3-15-201ENST00000390603 437 ntAPPRIS P1 BASIC15.94■□□□□ 0.14
CLCA3PQ9Y6N3 ARPC4-203ENST00000433034 926 ntTSL 3 BASIC15.94■□□□□ 0.14
CLCA3PQ9Y6N3 TMEM33-208ENST00000513702 1092 ntAPPRIS P1 TSL 5 BASIC15.94■□□□□ 0.14
CLCA3PQ9Y6N3 AC009567.1-201ENST00000515071 525 ntTSL 4 BASIC15.94■□□□□ 0.14
CLCA3PQ9Y6N3 RIN3-211ENST00000557762 517 ntTSL 3 BASIC15.94■□□□□ 0.14
CLCA3PQ9Y6N3 AC092384.3-201ENST00000561980 531 ntTSL 4 BASIC15.94■□□□□ 0.14
CLCA3PQ9Y6N3 MKNK2-212ENST00000591588 631 ntTSL 2 BASIC15.94■□□□□ 0.14
CLCA3PQ9Y6N3 WDR88-203ENST00000592765 651 ntTSL 5 BASIC15.94■□□□□ 0.14
CLCA3PQ9Y6N3 AC027601.4-201ENST00000611259 610 ntBASIC15.94■□□□□ 0.14
CLCA3PQ9Y6N3 PSMC5-202ENST00000375812 1494 ntTSL 2 BASIC15.94■□□□□ 0.14
CLCA3PQ9Y6N3 SELENBP1-201ENST00000368868 1752 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
CLCA3PQ9Y6N3 NPR3-203ENST00000415167 1753 ntAPPRIS P3 TSL 1 (best) BASIC15.94■□□□□ 0.14
CLCA3PQ9Y6N3 SLC10A3-203ENST00000393586 1893 ntTSL 5 BASIC15.94■□□□□ 0.14
CLCA3PQ9Y6N3 CLDN11-201ENST00000064724 2169 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
CLCA3PQ9Y6N3 ITGB2-AS1-202ENST00000441379 2282 ntTSL 1 (best) BASIC15.94■□□□□ 0.14
CLCA3PQ9Y6N3 RHBDF1-201ENST00000262316 2992 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
CLCA3PQ9Y6N3 ITPK1-210ENST00000556603 3174 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
CLCA3PQ9Y6N3 CDS1-201ENST00000295887 4461 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
CLCA3PQ9Y6N3 MAPT-201ENST00000262410 6762 ntAPPRIS P4 TSL 1 (best) BASIC15.94■□□□□ 0.14
CLCA3PQ9Y6N3 PPFIA3-201ENST00000334186 4733 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
CLCA3PQ9Y6N3 DGKZ-201ENST00000318201 3213 ntTSL 2 BASIC15.94■□□□□ 0.14
CLCA3PQ9Y6N3 SLC29A2-202ENST00000357440 2514 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
CLCA3PQ9Y6N3 CSK-210ENST00000567571 2443 ntAPPRIS P1 TSL 2 BASIC15.94■□□□□ 0.14
CLCA3PQ9Y6N3 NEK3-206ENST00000611833 2345 ntAPPRIS ALT2 TSL 5 BASIC15.94■□□□□ 0.14
CLCA3PQ9Y6N3 UBE3D-203ENST00000369747 1917 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
CLCA3PQ9Y6N3 ACE-204ENST00000428043 5120 ntTSL 2 BASIC15.93■□□□□ 0.14
CLCA3PQ9Y6N3 SPAG6-202ENST00000376603 2770 ntTSL 1 (best) BASIC15.93■□□□□ 0.14
CLCA3PQ9Y6N3 KIF5C-201ENST00000435030 6931 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
CLCA3PQ9Y6N3 DDX28-201ENST00000332395 2169 ntAPPRIS P1 BASIC15.93■□□□□ 0.14
CLCA3PQ9Y6N3 KCNV2-201ENST00000382082 2186 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
CLCA3PQ9Y6N3 THNSL2-202ENST00000343544 2052 ntTSL 1 (best) BASIC15.93■□□□□ 0.14
CLCA3PQ9Y6N3 FGF4-201ENST00000168712 3233 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
CLCA3PQ9Y6N3 PHTF1-205ENST00000393357 3244 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
CLCA3PQ9Y6N3 LGALS12-205ENST00000425950 1789 ntTSL 1 (best) BASIC15.93■□□□□ 0.14
CLCA3PQ9Y6N3 FENDRR-206ENST00000599749 2843 ntTSL 3 BASIC15.93■□□□□ 0.14
CLCA3PQ9Y6N3 MAPK14-201ENST00000229794 3779 ntAPPRIS P5 TSL 1 (best) BASIC15.93■□□□□ 0.14
CLCA3PQ9Y6N3 GPAT3-208ENST00000611707 2633 ntAPPRIS P1 TSL 5 BASIC15.93■□□□□ 0.14
CLCA3PQ9Y6N3 ATXN2-219ENST00000550104 4648 ntAPPRIS P3 TSL 1 (best) BASIC15.93■□□□□ 0.14
CLCA3PQ9Y6N3 PSMD6-210ENST00000492933 1495 ntTSL 1 (best) BASIC15.93■□□□□ 0.14
CLCA3PQ9Y6N3 PKD1L2-209ENST00000531391 1488 ntTSL 1 (best) BASIC15.93■□□□□ 0.14
CLCA3PQ9Y6N3 SMOX-205ENST00000379460 2230 ntAPPRIS P1 TSL 2 BASIC15.93■□□□□ 0.14
CLCA3PQ9Y6N3 PCDHA6-202ENST00000527624 2231 ntTSL 1 (best) BASIC15.93■□□□□ 0.14
CLCA3PQ9Y6N3 DPM3-203ENST00000368400 409 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
CLCA3PQ9Y6N3 CD99-204ENST00000381187 892 ntAPPRIS ALT2 TSL 2 BASIC15.93■□□□□ 0.14
CLCA3PQ9Y6N3 LBH-204ENST00000406087 559 ntTSL 4 BASIC15.93■□□□□ 0.14
CLCA3PQ9Y6N3 ZFAND2B-207ENST00000409412 569 ntTSL 2 BASIC15.93■□□□□ 0.14
CLCA3PQ9Y6N3 PMS2P1-201ENST00000431037 1228 ntBASIC15.93■□□□□ 0.14
CLCA3PQ9Y6N3 CRCP-205ENST00000431089 942 ntTSL 2 BASIC15.93■□□□□ 0.14
CLCA3PQ9Y6N3 VN2R19P-201ENST00000442399 1052 ntBASIC15.93■□□□□ 0.14
CLCA3PQ9Y6N3 AL591424.1-201ENST00000442569 1213 ntBASIC15.93■□□□□ 0.14
CLCA3PQ9Y6N3 AC087163.2-201ENST00000457299 853 ntBASIC15.93■□□□□ 0.14
CLCA3PQ9Y6N3 PLA2G12A-202ENST00000502283 1189 ntAPPRIS ALT2 TSL 1 (best) BASIC15.93■□□□□ 0.14
CLCA3PQ9Y6N3 KRT18P58-201ENST00000527480 1120 ntBASIC15.93■□□□□ 0.14
CLCA3PQ9Y6N3 CD63-210ENST00000550776 870 ntTSL 5 BASIC15.93■□□□□ 0.14
CLCA3PQ9Y6N3 LINC00596-201ENST00000559615 937 ntTSL 5 BASIC15.93■□□□□ 0.14
CLCA3PQ9Y6N3 ADAM22-202ENST00000398201 2784 ntAPPRIS ALT2 TSL 1 (best) BASIC15.93■□□□□ 0.14
CLCA3PQ9Y6N3 PHYH-202ENST00000396913 1732 ntTSL 5 BASIC15.93■□□□□ 0.14
CLCA3PQ9Y6N3 LINC00887-203ENST00000429578 1717 ntTSL 2 BASIC15.93■□□□□ 0.14
CLCA3PQ9Y6N3 PCDHB19P-201ENST00000570871 2371 ntBASIC15.93■□□□□ 0.14
CLCA3PQ9Y6N3 TRAF2-201ENST00000247668 2264 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
CLCA3PQ9Y6N3 KRT15-201ENST00000254043 5237 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
CLCA3PQ9Y6N3 SEC23A-203ENST00000545328 2734 ntTSL 2 BASIC15.93■□□□□ 0.14
CLCA3PQ9Y6N3 HYAL3-205ENST00000450982 1402 ntTSL 1 (best) BASIC15.93■□□□□ 0.14
CLCA3PQ9Y6N3 FTSJ1-201ENST00000019019 1986 ntAPPRIS ALT1 TSL 2 BASIC15.93■□□□□ 0.14
CLCA3PQ9Y6N3 IL4I1-204ENST00000595948 2407 ntAPPRIS P4 TSL 1 (best) BASIC15.93■□□□□ 0.14
CLCA3PQ9Y6N3 PABPC1L-201ENST00000217073 1851 ntAPPRIS P1 TSL 5 BASIC15.93■□□□□ 0.14
CLCA3PQ9Y6N3 SPDEF-201ENST00000374037 1895 ntAPPRIS P3 TSL 1 (best) BASIC15.93■□□□□ 0.14
CLCA3PQ9Y6N3 ATAD3A-207ENST00000536055 2332 ntTSL 2 BASIC15.93■□□□□ 0.14
CLCA3PQ9Y6N3 ITGB1BP1-204ENST00000360635 4859 ntAPPRIS P1 TSL 5 BASIC15.93■□□□□ 0.14
CLCA3PQ9Y6N3 OVOL1-203ENST00000532448 1774 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
CLCA3PQ9Y6N3 AC008741.2-201ENST00000612792 3115 ntBASIC15.92■□□□□ 0.14
CLCA3PQ9Y6N3 F12-201ENST00000253496 2049 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
CLCA3PQ9Y6N3 LMBR1-202ENST00000359422 4727 ntTSL 5 BASIC15.92■□□□□ 0.14
Retrieved 100 of 98,524 protein–RNA pairs in 32.7 ms