Protein–RNA interactions for Protein: Q9Y5P3

RAI2, Retinoic acid-induced protein 2, humanhuman

Predictions only

Length 530 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAI2Q9Y5P3 NUP62-211ENST00000597029 2053 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
RAI2Q9Y5P3 SLC27A2-201ENST00000267842 2394 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
RAI2Q9Y5P3 PRKRIP1-208ENST00000496391 3430 ntAPPRIS P1 TSL 2 BASIC17■□□□□ 0.31
RAI2Q9Y5P3 TBX4-201ENST00000240335 2470 ntAPPRIS P3 TSL 1 (best) BASIC17■□□□□ 0.31
RAI2Q9Y5P3 CIB3-201ENST00000269878 711 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
RAI2Q9Y5P3 ZNF593-201ENST00000270812 698 ntTSL 2 BASIC17■□□□□ 0.31
RAI2Q9Y5P3 PODNL1-202ENST00000339560 2165 ntAPPRIS P3 TSL 1 (best) BASIC17■□□□□ 0.31
RAI2Q9Y5P3 AIFM3-201ENST00000399163 2309 ntAPPRIS ALT1 TSL 1 (best) BASIC17■□□□□ 0.31
RAI2Q9Y5P3 AL121672.1-201ENST00000439423 1181 ntTSL 1 (best) BASIC17■□□□□ 0.31
RAI2Q9Y5P3 TMEM205-202ENST00000447337 916 ntAPPRIS P1 TSL 2 BASIC17■□□□□ 0.31
RAI2Q9Y5P3 CDKN2A-209ENST00000498628 926 ntTSL 2 BASIC17■□□□□ 0.31
RAI2Q9Y5P3 AC025183.1-201ENST00000506335 425 ntTSL 4 BASIC17■□□□□ 0.31
RAI2Q9Y5P3 PC-204ENST00000524491 1714 ntTSL 2 BASIC17■□□□□ 0.31
RAI2Q9Y5P3 IL18BP-211ENST00000531053 853 ntAPPRIS ALT2 TSL 2 BASIC17■□□□□ 0.31
RAI2Q9Y5P3 PAX9-204ENST00000554201 1289 ntTSL 2 BASIC17■□□□□ 0.31
RAI2Q9Y5P3 LINC01413-201ENST00000564843 772 ntTSL 3 BASIC17■□□□□ 0.31
RAI2Q9Y5P3 CEMP1-201ENST00000565480 519 ntAPPRIS ALT2 TSL 3 BASIC17■□□□□ 0.31
RAI2Q9Y5P3 GGT6-203ENST00000573591 1730 ntTSL 4 BASIC17■□□□□ 0.31
RAI2Q9Y5P3 CDC42EP4-206ENST00000581014 737 ntTSL 5 BASIC17■□□□□ 0.31
RAI2Q9Y5P3 AC074135.2-201ENST00000600896 510 ntTSL 3 BASIC17■□□□□ 0.31
RAI2Q9Y5P3 AC023141.13-201ENST00000604991 943 ntBASIC17■□□□□ 0.31
RAI2Q9Y5P3 AC013467.2-201ENST00000605472 835 ntBASIC17■□□□□ 0.31
RAI2Q9Y5P3 PCDHGC4-204ENST00000618371 812 ntTSL 3 BASIC17■□□□□ 0.31
RAI2Q9Y5P3 AC004877.2-201ENST00000623941 599 ntBASIC17■□□□□ 0.31
RAI2Q9Y5P3 AC007064.4-201ENST00000637740 555 ntBASIC17■□□□□ 0.31
RAI2Q9Y5P3 MTMR1-208ENST00000445323 4516 ntTSL 1 (best) BASIC17■□□□□ 0.31
RAI2Q9Y5P3 RUBCNL-203ENST00000378787 2731 ntTSL 2 BASIC17■□□□□ 0.31
RAI2Q9Y5P3 TMED3-203ENST00000536821 2265 ntTSL 2 BASIC17■□□□□ 0.31
RAI2Q9Y5P3 STEAP3-204ENST00000409811 2103 ntTSL 1 (best) BASIC17■□□□□ 0.31
RAI2Q9Y5P3 GPS1-228ENST00000624957 1825 ntAPPRIS ALT1 TSL 5 BASIC17■□□□□ 0.31
RAI2Q9Y5P3 COPS3-212ENST00000539941 1699 ntTSL 2 BASIC17■□□□□ 0.31
RAI2Q9Y5P3 UBE2G1-204ENST00000572484 1514 ntTSL 5 BASIC17■□□□□ 0.31
RAI2Q9Y5P3 FAM184A-201ENST00000338891 4141 ntAPPRIS P4 TSL 1 (best) BASIC17■□□□□ 0.31
RAI2Q9Y5P3 EPN2-203ENST00000395618 2216 ntTSL 2 BASIC17■□□□□ 0.31
RAI2Q9Y5P3 HARS-203ENST00000431330 1774 ntTSL 2 BASIC17■□□□□ 0.31
RAI2Q9Y5P3 WIPF1-201ENST00000272746 3028 ntAPPRIS ALT2 TSL 1 (best) BASIC16.99■□□□□ 0.31
RAI2Q9Y5P3 ZNF57-201ENST00000306908 2003 ntAPPRIS P2 TSL 1 (best) BASIC16.99■□□□□ 0.31
RAI2Q9Y5P3 NKIRAS1-206ENST00000425478 2014 ntAPPRIS P2 TSL 1 (best) BASIC16.99■□□□□ 0.31
RAI2Q9Y5P3 ZNF57-205ENST00000614108 2002 ntAPPRIS ALT2 TSL 5 BASIC16.99■□□□□ 0.31
RAI2Q9Y5P3 BCAR1-209ENST00000546196 1340 ntBASIC16.99■□□□□ 0.31
RAI2Q9Y5P3 NF2-208ENST00000403435 2568 ntTSL 5 BASIC16.99■□□□□ 0.31
RAI2Q9Y5P3 CD300A-202ENST00000360141 1858 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
RAI2Q9Y5P3 ZNF385A-203ENST00000394313 2430 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
RAI2Q9Y5P3 CD1D-201ENST00000368171 2253 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
RAI2Q9Y5P3 ASAH1-231ENST00000636577 2129 ntTSL 5 BASIC16.99■□□□□ 0.31
RAI2Q9Y5P3 AC119396.1-201ENST00000576789 1558 ntAPPRIS P1 TSL 5 BASIC16.99■□□□□ 0.31
RAI2Q9Y5P3 AC078925.2-201ENST00000624013 1973 ntBASIC16.99■□□□□ 0.31
RAI2Q9Y5P3 SPIDR-227ENST00000541342 3311 ntAPPRIS ALT2 TSL 2 BASIC16.99■□□□□ 0.31
RAI2Q9Y5P3 NSFL1C-202ENST00000353088 2611 ntTSL 2 BASIC16.99■□□□□ 0.31
RAI2Q9Y5P3 HIST1H2BL-201ENST00000377401 488 ntAPPRIS P1 BASIC16.99■□□□□ 0.31
RAI2Q9Y5P3 HCG4-201ENST00000418983 998 ntBASIC16.99■□□□□ 0.31
RAI2Q9Y5P3 AC131097.3-202ENST00000439270 331 ntTSL 5 BASIC16.99■□□□□ 0.31
RAI2Q9Y5P3 COX20P2-201ENST00000452636 358 ntBASIC16.99■□□□□ 0.31
RAI2Q9Y5P3 BATF2-204ENST00000527716 1230 ntTSL 2 BASIC16.99■□□□□ 0.31
RAI2Q9Y5P3 AC069503.2-201ENST00000546333 576 ntAPPRIS P1 TSL 5 BASIC16.99■□□□□ 0.31
RAI2Q9Y5P3 AC087641.1-201ENST00000557561 1021 ntBASIC16.99■□□□□ 0.31
RAI2Q9Y5P3 MIR4515-201ENST00000584082 81 ntBASIC16.99■□□□□ 0.31
RAI2Q9Y5P3 OR5AH1P-202ENST00000597822 431 ntTSL 3 BASIC16.99■□□□□ 0.31
RAI2Q9Y5P3 AC010624.2-201ENST00000600998 575 ntTSL 5 BASIC16.99■□□□□ 0.31
RAI2Q9Y5P3 AC244153.1-202ENST00000617855 482 ntTSL 3 BASIC16.99■□□□□ 0.31
RAI2Q9Y5P3 EDC3-202ENST00000426797 2093 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
RAI2Q9Y5P3 LSM12-204ENST00000591247 2484 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
RAI2Q9Y5P3 SPTBN4-212ENST00000598249 8070 ntAPPRIS P2 TSL 1 (best) BASIC16.99■□□□□ 0.31
RAI2Q9Y5P3 AC012569.1-201ENST00000591191 1524 ntBASIC16.99■□□□□ 0.31
RAI2Q9Y5P3 NAA50-201ENST00000240922 6135 ntAPPRIS P3 TSL 1 (best) BASIC16.99■□□□□ 0.31
RAI2Q9Y5P3 VGLL4-211ENST00000430365 1377 ntAPPRIS P1 TSL 2 BASIC16.99■□□□□ 0.31
RAI2Q9Y5P3 HOXB1-201ENST00000239174 2020 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
RAI2Q9Y5P3 ACTRT3-201ENST00000330368 2005 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
RAI2Q9Y5P3 ZNRF3-201ENST00000402174 2667 ntAPPRIS P3 TSL 2 BASIC16.99■□□□□ 0.31
RAI2Q9Y5P3 SORT1-201ENST00000256637 7028 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
RAI2Q9Y5P3 TRPV4-207ENST00000541794 2475 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
RAI2Q9Y5P3 KIF16B-203ENST00000408042 4640 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
RAI2Q9Y5P3 ALDH3A1-212ENST00000494157 1572 ntTSL 3 BASIC16.98■□□□□ 0.31
RAI2Q9Y5P3 AC073957.2-201ENST00000549241 1562 ntTSL 4 BASIC16.98■□□□□ 0.31
RAI2Q9Y5P3 C16orf71-204ENST00000590191 2564 ntAPPRIS ALT2 TSL 5 BASIC16.98■□□□□ 0.31
RAI2Q9Y5P3 PRORSD1P-202ENST00000563365 2154 ntBASIC16.98■□□□□ 0.31
RAI2Q9Y5P3 AC025580.3-201ENST00000617932 1424 ntBASIC16.98■□□□□ 0.31
RAI2Q9Y5P3 KCNQ2-207ENST00000370224 3004 ntTSL 5 BASIC16.98■□□□□ 0.31
RAI2Q9Y5P3 POLR3E-203ENST00000418581 2529 ntTSL 2 BASIC16.98■□□□□ 0.31
RAI2Q9Y5P3 ADRA1A-202ENST00000354550 1765 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
RAI2Q9Y5P3 WDR53-203ENST00000429115 683 ntTSL 2 BASIC16.98■□□□□ 0.31
RAI2Q9Y5P3 LINC00237-202ENST00000455890 1220 ntTSL 2 BASIC16.98■□□□□ 0.31
RAI2Q9Y5P3 HOXD8-204ENST00000544999 1235 ntAPPRIS ALT2 TSL 5 BASIC16.98■□□□□ 0.31
RAI2Q9Y5P3 AC008403.2-204ENST00000600650 1006 ntTSL 3 BASIC16.98■□□□□ 0.31
RAI2Q9Y5P3 WT1-AS_2.1-201ENST00000613208 137 ntBASIC16.98■□□□□ 0.31
RAI2Q9Y5P3 AP001350.2-201ENST00000625104 1094 ntBASIC16.98■□□□□ 0.31
RAI2Q9Y5P3 TBC1D2B-201ENST00000300584 6067 ntAPPRIS ALT2 TSL 5 BASIC16.98■□□□□ 0.31
RAI2Q9Y5P3 KCTD15-202ENST00000430256 2555 ntAPPRIS P1 TSL 2 BASIC16.98■□□□□ 0.31
RAI2Q9Y5P3 RGS3-206ENST00000374136 2092 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
RAI2Q9Y5P3 LINC01569-202ENST00000573042 2093 ntTSL 2 BASIC16.98■□□□□ 0.31
RAI2Q9Y5P3 ADAM22-202ENST00000398201 2784 ntAPPRIS ALT2 TSL 1 (best) BASIC16.98■□□□□ 0.31
RAI2Q9Y5P3 TMED9-201ENST00000332598 1473 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
RAI2Q9Y5P3 KAT2A-201ENST00000225916 3109 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
RAI2Q9Y5P3 PTGES3-201ENST00000262033 1920 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
RAI2Q9Y5P3 CD9-203ENST00000382518 1556 ntAPPRIS P1 TSL 5 BASIC16.98■□□□□ 0.31
RAI2Q9Y5P3 ASPH-211ENST00000518068 2744 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
RAI2Q9Y5P3 EIF2AK4-201ENST00000263791 5499 ntAPPRIS P1 TSL 2 BASIC16.97■□□□□ 0.31
RAI2Q9Y5P3 RXRB-201ENST00000374680 2908 ntAPPRIS P3 TSL 1 (best) BASIC16.97■□□□□ 0.31
RAI2Q9Y5P3 SLC10A3-202ENST00000369649 1763 ntAPPRIS ALT2 TSL 1 (best) BASIC16.97■□□□□ 0.31
RAI2Q9Y5P3 NKAIN1-201ENST00000373736 2589 ntAPPRIS P1 TSL 2 BASIC16.97■□□□□ 0.31
Retrieved 100 of 98,524 protein–RNA pairs in 34.3 ms